dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package spooles dpkg-buildpackage: source version 2.2-5 dpkg-buildpackage: source changed by Adam C. Powell, IV dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean dh_testdir dh_clean make clean make[1]: Entering directory `/home/hazelsct/spooles-2.2' cd A2 ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/A2' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/A2/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/A2/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/A2/drivers' rm -f *.a *.o test_norms testQR make[3]: Leaving directory `/home/hazelsct/spooles-2.2/A2/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/A2/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/A2/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/A2' cd BKL ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/BKL' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/BKL/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BKL/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/BKL/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BKL/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/BKL' cd BPG ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/BPG' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/BPG/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BPG/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/BPG/drivers' rm -f *.a *.o testIO testDM extractBPG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BPG/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/BPG/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BPG/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/BPG' cd Chv ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Chv' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Chv/drivers' rm -f *.a *.o test_addChevron test_assmbChv test_copyEntriesToVector test_copyBigEntriesToVector test_factor test_findPivot test_maxabs test_swap test_r1upd test_r2upd test_update make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Chv/drivers' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Chv/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Chv/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Chv/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Chv/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Chv' cd ChvList ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/ChvList' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ChvList/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ChvList/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ChvList/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ChvList/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ChvList' cd ChvManager ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/ChvManager' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ChvManager/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ChvManager/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ChvManager/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ChvManager/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ChvManager' cd Coords ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Coords' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Coords/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Coords/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Coords/drivers' rm -f *.a *.o testIO mk9PCoords make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Coords/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Coords/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Coords/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Coords' cd DSTree ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/DSTree' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DSTree/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DSTree/drivers' rm -f *.a *.o testIO writeStagesIV testDomWeightStages make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DSTree/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree' cd DV ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/DV' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DV/drivers' rm -f *.a *.o testIO make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DV/drivers' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DV/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DV/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DV/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DV/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/DV' cd DenseMtx ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/DenseMtx' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DenseMtx/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DenseMtx/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/DenseMtx/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DenseMtx/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/DenseMtx' cd Drand ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Drand' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Drand/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Drand/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Drand/drivers' rm -f *.a *.o testDrand make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Drand/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Drand/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Drand/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Drand' cd EGraph ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/EGraph' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/EGraph/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/EGraph/drivers' rm -f *.a *.o testIO mkGraph mkGridEGraph make[3]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/EGraph/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph' cd ETree ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/ETree' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ETree/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ETree/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ETree/drivers' rm -f *.a *.o createETree extractTopSep mkNDETree mkNDoutput permuteETree testExpand testFS testHeight testIO testMaps testMS testStats testStorage testTransform make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ETree/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ETree/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ETree/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ETree' cd FrontMtx ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx/drivers' rm -f *.a *.o testGrid testQRgrid testFactor make[3]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx' cd GPart ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/GPart' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/GPart/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/GPart/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/GPart/drivers' rm -f *.a *.o testDDviaFishnet testTwoSetViaBKL testSmoothBisector testRBviaDDsep mkDSTree testRBviaDDsep2 make[3]: Leaving directory `/home/hazelsct/spooles-2.2/GPart/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/GPart/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/GPart/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/GPart' cd Graph ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Graph' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Graph/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Graph/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Graph/drivers' rm -f *.a *.o checkComponents compressGraph expandGraph mkGridGraph testIO testIsSymmetric testWirebasket writeMetisFile make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Graph/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Graph/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Graph/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Graph' cd I2Ohash ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash/doc' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash/drivers' rm -f *.a *.o test_hash make[3]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash/drivers' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash' cd IIheap ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/IIheap' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IIheap/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IIheap/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IIheap/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IIheap/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/IIheap' cd IV ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/IV' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IV/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IV/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IV/drivers' rm -f *.a *.o testIO make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IV/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IV/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IV/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/IV' cd IVL ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/IVL' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IVL/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IVL/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IVL/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IVL/doc' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/IVL/drivers' rm -f *.a *.o testExpand testIO make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IVL/drivers' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/IVL' cd Ideq ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Ideq' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Ideq/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Ideq/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Ideq/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Ideq/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Ideq' cd InpMtx ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx/drivers' rm -f *.a *.o adjToGraph createGraph createGraphForATA getProfile mkLaplacianMtx mkNaturalFactorMtx readAIJ readAIJ2 testExtract testFullAdj testFullAdj2 testGMMM testGMVM testHBIO testHBIO2 testInput testIO testMMM testR2D weightedAdjToGraph make[3]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx' cd Lock ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Lock' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Lock/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Lock/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Lock/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Lock/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Lock' cd MPI ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/MPI' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MPI/src' makefile:8: warning: overriding commands for target `.c.a' ../../Make.inc:97: warning: ignoring old commands for target `.c.a' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MPI/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MPI/drivers' makefile:8: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' rm -f *.a *.o allInOneMPI patchAndGoMPI testGridMPI testIV_allgather testIVL_allgather testIVL_alltoall testSplitDenseMtx testSplitInpMtx testSymbFac testGather testMMM testIVL_Bcast testGraph_Bcast testScatterDenseMtx testScatterInpMtx make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MPI/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MPI/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MPI/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/MPI' cd MSMD ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/MSMD' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MSMD/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MSMD/drivers' rm -f *.a *.o orderViaMMD orderViaMS orderViaND orderViaStages make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MSMD/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD' cd MT ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/MT' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MT/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MT/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MT/drivers' rm -f *.a *.o testMMM testGridMT testQRgridMT allInOneMT patchAndGoMT testFactorMT make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MT/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/MT/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MT/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/MT' cd Network ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Network' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Network/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Network/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Network/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Network/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Network' cd PatchAndGoInfo ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo' cd Pencil ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Pencil' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Pencil/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Pencil/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Pencil/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Pencil/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Pencil' cd Perm ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Perm' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Perm/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Perm/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Perm/drivers' rm -f *.a *.o testIO compressPerm make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Perm/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Perm/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Perm/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Perm' cd SemiImplMtx ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx/drivers' rm -f *.a *.o testSimple testGrid make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx' cd SolveMap ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/SolveMap' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SolveMap/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SolveMap/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SolveMap/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SolveMap/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SolveMap' cd SubMtx ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx/drivers' rm -f *.a *.o testIO test_scalevec test_solve test_solveH test_solveT test_solveupd test_solveupdH test_solveupdT test_sort make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx' cd SubMtxList ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxList' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxList/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxList/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxList/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxList/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxList' cd SubMtxManager ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxManager' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxManager/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxManager/src' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxManager/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxManager/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxManager' cd SymbFac ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac/drivers' rm -f *.a *.o testSymbfacInpMtx testSymbfacGraph make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac' cd Tree ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Tree' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Tree/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Tree/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Tree/drivers' rm -f *.a *.o drawTree make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Tree/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Tree/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Tree/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Tree' cd Utilities ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/Utilities' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Utilities/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Utilities/drivers' rm -f a *.o test_sort test_sortUpAndCompress make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/Utilities/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities' cd ZV ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/ZV' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ZV/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ZV/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ZV/drivers' rm -f *.a *.o testIO make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ZV/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/ZV/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ZV/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ZV' cd misc ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/misc' cd src ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/misc/src' rm -f *.a *.o make[3]: Leaving directory `/home/hazelsct/spooles-2.2/misc/src' cd drivers ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/misc/drivers' rm -f *.a *.o allInOne drawGraph patchAndGo QRallInOne testOrderViaND testOrderViaMS testOrderViaMMD testNDperm testSemi testOptPart testOrderViaBestOfNDandMS make[3]: Leaving directory `/home/hazelsct/spooles-2.2/misc/drivers' cd doc ; make clean make[3]: Entering directory `/home/hazelsct/spooles-2.2/misc/doc' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/misc/doc' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/misc' cd documentation ; make clean make[2]: Entering directory `/home/hazelsct/spooles-2.2/documentation' cd AllInOne ; make clean ; make[3]: Entering directory `/home/hazelsct/spooles-2.2/documentation/AllInOne' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/documentation/AllInOne' cd FrontTrees ; make clean ; make[3]: Entering directory `/home/hazelsct/spooles-2.2/documentation/FrontTrees' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/documentation/FrontTrees' cd Install ; make clean ; make[3]: Entering directory `/home/hazelsct/spooles-2.2/documentation/Install' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/documentation/Install' cd PP99 ; make clean ; make[3]: Entering directory `/home/hazelsct/spooles-2.2/documentation/PP99' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/documentation/PP99' cd ReferenceManual ; make clean ; make[3]: Entering directory `/home/hazelsct/spooles-2.2/documentation/ReferenceManual' rm -f *.dvi make[3]: Leaving directory `/home/hazelsct/spooles-2.2/documentation/ReferenceManual' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/documentation' rm -f *.o *.a make[1]: Leaving directory `/home/hazelsct/spooles-2.2' rm -f */*/*.lo debian/rules unpatch make[1]: Entering directory `/home/hazelsct/spooles-2.2' dh_testdir if [ -e patch-stamp ]; then \ patch -p1 -R < debian/patches/I2Ohash-64bit.patch; \ patch -p1 -R < debian/patches/tex-fixes.patch; \ patch -p1 -R < debian/patches/html-doc.patch; \ patch -p1 -R < debian/patches/latex-usepackage.patch; \ patch -p1 -R < debian/patches/shared-libs.patch; \ patch -p1 -R < debian/patches/makefiles.patch; \ rm -f patch-stamp; \ fi make[1]: Leaving directory `/home/hazelsct/spooles-2.2' rm -f *-stamp dpkg-source -b spooles-2.2 dpkg-source: info: using source format `1.0' dpkg-source: info: building spooles using existing spooles_2.2.orig.tar.gz dpkg-source: info: building spooles in spooles_2.2-5.diff.gz dpkg-source: warning: ignoring deletion of file Chv/doc/simple.eps.bak dpkg-source: warning: ignoring deletion of file FrontMtx/doc/intro.tex.bak dpkg-source: warning: ignoring deletion of file MPI/doc/proto.tex.bak dpkg-source: warning: ignoring deletion of file Tree/doc/proto.tex.bak dpkg-source: info: building spooles in spooles_2.2-5.dsc debian/rules build dh_testdir if [ ! -e patch-stamp ]; then \ patch -p1 < debian/patches/makefiles.patch; \ patch -p1 < debian/patches/shared-libs.patch; \ patch -p1 < debian/patches/latex-usepackage.patch; \ patch -p1 < debian/patches/html-doc.patch; \ patch -p1 < debian/patches/tex-fixes.patch; \ patch -p1 < debian/patches/I2Ohash-64bit.patch; \ touch patch-stamp; \ fi patching file Make.inc patching file MPI/makefile patching file MPI/src/makefile patching file MT/makefile patching file makeLib patching file makefile patching file documentation/AllInOne/main.tex patching file documentation/FrontTrees/main.tex patching file documentation/ReferenceManual/main.tex patching file spooles.2.2.html patching file BPG/doc/main.tex patching file Chv/doc/main.tex patching file ChvList/doc/main.tex patching file ChvManager/doc/main.tex patching file DenseMtx/doc/main.tex patching file Eigen/doc/main.tex patching file ETree/doc/main.tex patching file FrontMtx/doc/main.tex patching file Graph/doc/main.tex patching file ILUMtx/doc/main.tex patching file InpMtx/doc/main.tex patching file Iter/doc/main.tex patching file LinSol/doc/main.tex patching file Lock/doc/main.tex patching file Pencil/doc/main.tex patching file SemiImplMtx/doc/main.tex patching file SubMtx/doc/main.tex patching file SubMtxList/doc/main.tex patching file SubMtxManager/doc/main.tex patching file Tree/doc/main.tex patching file misc/doc/main.tex patching file I2Ohash/src/util.c make lib make[1]: Entering directory `/home/hazelsct/spooles-2.2' cd A2 ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/A2' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/A2/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/A2/src' makeG:25: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o A2_basics.o -I/usr/include/mpi cc -c -O2 copyEntriesToVector.c -o A2_copyEntriesToVector.o -I/usr/include/mpi cc -c -O2 init.c -o A2_init.o -I/usr/include/mpi cc -c -O2 instance.c -o A2_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o A2_IO.o -I/usr/include/mpi cc -c -O2 makeStaircase.c -o A2_makeStaircase.o -I/usr/include/mpi cc -c -O2 norms.c -o A2_norms.o -I/usr/include/mpi cc -c -O2 QRreduce.c -o A2_QRreduce.o -I/usr/include/mpi cc -c -O2 sort.c -o A2_sort.o -I/usr/include/mpi cc -c -O2 util.c -o A2_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o A2_basics.lo -I/usr/include/mpi cc -c -O2 copyEntriesToVector.c -fPIC -DPIC -o A2_copyEntriesToVector.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o A2_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o A2_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o A2_IO.lo -I/usr/include/mpi cc -c -O2 makeStaircase.c -fPIC -DPIC -o A2_makeStaircase.lo -I/usr/include/mpi cc -c -O2 norms.c -fPIC -DPIC -o A2_norms.lo -I/usr/include/mpi cc -c -O2 QRreduce.c -fPIC -DPIC -o A2_QRreduce.lo -I/usr/include/mpi cc -c -O2 sort.c -fPIC -DPIC -o A2_sort.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o A2_util.lo -I/usr/include/mpi ar rv ../../libspooles.a A2_*.o ar: creating ../../libspooles.a a - A2_basics.o a - A2_copyEntriesToVector.o a - A2_init.o a - A2_instance.o a - A2_IO.o a - A2_makeStaircase.o a - A2_norms.o a - A2_QRreduce.o a - A2_sort.o a - A2_util.o rm -f A2_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/A2/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/A2/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/A2' cd BKL ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/BKL' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/BKL/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/BKL/src' makeG:21: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o BKL_basics.o -I/usr/include/mpi cc -c -O2 evalfcn.c -o BKL_evalfcn.o -I/usr/include/mpi cc -c -O2 exhSearch.c -o BKL_exhSearch.o -I/usr/include/mpi cc -c -O2 fidmat.c -o BKL_fidmat.o -I/usr/include/mpi cc -c -O2 init.c -o BKL_init.o -I/usr/include/mpi cc -c -O2 util.c -o BKL_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o BKL_basics.lo -I/usr/include/mpi cc -c -O2 evalfcn.c -fPIC -DPIC -o BKL_evalfcn.lo -I/usr/include/mpi cc -c -O2 exhSearch.c -fPIC -DPIC -o BKL_exhSearch.lo -I/usr/include/mpi cc -c -O2 fidmat.c -fPIC -DPIC -o BKL_fidmat.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o BKL_init.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o BKL_util.lo -I/usr/include/mpi ar rv ../../libspooles.a BKL_*.o a - BKL_basics.o a - BKL_evalfcn.o a - BKL_exhSearch.o a - BKL_fidmat.o a - BKL_init.o a - BKL_util.o rm -f BKL_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/BKL/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BKL/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/BKL' cd BPG ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/BPG' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/BPG/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/BPG/src' makeG:22: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o BPG_basics.o -I/usr/include/mpi cc -c -O2 DM.c -o BPG_DM.o -I/usr/include/mpi cc -c -O2 init.c -o BPG_init.o -I/usr/include/mpi cc -c -O2 IO.c -o BPG_IO.o -I/usr/include/mpi cc -c -O2 makeGraphs.c -o BPG_makeGraphs.o -I/usr/include/mpi cc -c -O2 maxFlow.c -o BPG_maxFlow.o -I/usr/include/mpi cc -c -O2 pseudo.c -o BPG_pseudo.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o BPG_basics.lo -I/usr/include/mpi cc -c -O2 DM.c -fPIC -DPIC -o BPG_DM.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o BPG_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o BPG_IO.lo -I/usr/include/mpi cc -c -O2 makeGraphs.c -fPIC -DPIC -o BPG_makeGraphs.lo -I/usr/include/mpi cc -c -O2 maxFlow.c -fPIC -DPIC -o BPG_maxFlow.lo -I/usr/include/mpi cc -c -O2 pseudo.c -fPIC -DPIC -o BPG_pseudo.lo -I/usr/include/mpi ar rv ../../libspooles.a BPG_*.o a - BPG_basics.o a - BPG_DM.o a - BPG_init.o a - BPG_IO.o a - BPG_makeGraphs.o a - BPG_maxFlow.o a - BPG_pseudo.o rm -f BPG_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/BPG/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/BPG/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/BPG' cd Chv ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Chv' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Chv/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Chv/src' makeG:27: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 assemble.c -o Chv_assemble.o -I/usr/include/mpi cc -c -O2 basics.c -o Chv_basics.o -I/usr/include/mpi cc -c -O2 copy.c -o Chv_copy.o -I/usr/include/mpi cc -c -O2 factor.c -o Chv_factor.o -I/usr/include/mpi cc -c -O2 findPivot.c -o Chv_findPivot.o -I/usr/include/mpi cc -c -O2 init.c -o Chv_init.o -I/usr/include/mpi cc -c -O2 instance.c -o Chv_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o Chv_IO.o -I/usr/include/mpi cc -c -O2 search.c -o Chv_search.o -I/usr/include/mpi cc -c -O2 swap.c -o Chv_swap.o -I/usr/include/mpi cc -c -O2 update.c -o Chv_update.o -I/usr/include/mpi cc -c -O2 util.c -o Chv_util.o -I/usr/include/mpi cc -c -O2 assemble.c -fPIC -DPIC -o Chv_assemble.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Chv_basics.lo -I/usr/include/mpi cc -c -O2 copy.c -fPIC -DPIC -o Chv_copy.lo -I/usr/include/mpi cc -c -O2 factor.c -fPIC -DPIC -o Chv_factor.lo -I/usr/include/mpi cc -c -O2 findPivot.c -fPIC -DPIC -o Chv_findPivot.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Chv_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o Chv_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Chv_IO.lo -I/usr/include/mpi cc -c -O2 search.c -fPIC -DPIC -o Chv_search.lo -I/usr/include/mpi cc -c -O2 swap.c -fPIC -DPIC -o Chv_swap.lo -I/usr/include/mpi cc -c -O2 update.c -fPIC -DPIC -o Chv_update.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Chv_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Chv_*.o a - Chv_assemble.o a - Chv_basics.o a - Chv_copy.o a - Chv_factor.o a - Chv_findPivot.o a - Chv_init.o a - Chv_instance.o a - Chv_IO.o a - Chv_search.o a - Chv_swap.o a - Chv_update.o a - Chv_util.o rm -f Chv_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Chv/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Chv/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Chv' cd ChvList ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/ChvList' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/ChvList/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/ChvList/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o ChvList_basics.o -I/usr/include/mpi cc -c -O2 init.c -o ChvList_init.o -I/usr/include/mpi cc -c -O2 IO.c -o ChvList_IO.o -I/usr/include/mpi cc -c -O2 util.c -o ChvList_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o ChvList_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o ChvList_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o ChvList_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o ChvList_util.lo -I/usr/include/mpi ar rv ../../libspooles.a ChvList_*.o a - ChvList_basics.o a - ChvList_init.o a - ChvList_IO.o a - ChvList_util.o rm -f ChvList_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/ChvList/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ChvList/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ChvList' cd ChvManager ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/ChvManager' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/ChvManager/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/ChvManager/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o ChvManager_basics.o -I/usr/include/mpi cc -c -O2 init.c -o ChvManager_init.o -I/usr/include/mpi cc -c -O2 IO.c -o ChvManager_IO.o -I/usr/include/mpi cc -c -O2 util.c -o ChvManager_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o ChvManager_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o ChvManager_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o ChvManager_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o ChvManager_util.lo -I/usr/include/mpi ar rv ../../libspooles.a ChvManager_*.o a - ChvManager_basics.o a - ChvManager_init.o a - ChvManager_IO.o a - ChvManager_util.o rm -f ChvManager_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/ChvManager/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ChvManager/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ChvManager' cd Coords ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Coords' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Coords/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Coords/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Coords_basics.o -I/usr/include/mpi cc -c -O2 init.c -o Coords_init.o -I/usr/include/mpi cc -c -O2 IO.c -o Coords_IO.o -I/usr/include/mpi cc -c -O2 util.c -o Coords_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Coords_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Coords_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Coords_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Coords_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Coords_*.o a - Coords_basics.o a - Coords_init.o a - Coords_IO.o a - Coords_util.o rm -f Coords_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Coords/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Coords/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Coords' cd DSTree ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/DSTree' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/DSTree/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/DSTree/src' makeG:21: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o DSTree_basics.o -I/usr/include/mpi cc -c -O2 init.c -o DSTree_init.o -I/usr/include/mpi cc -c -O2 instance.c -o DSTree_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o DSTree_IO.o -I/usr/include/mpi cc -c -O2 stages.c -o DSTree_stages.o -I/usr/include/mpi cc -c -O2 util.c -o DSTree_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o DSTree_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o DSTree_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o DSTree_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o DSTree_IO.lo -I/usr/include/mpi cc -c -O2 stages.c -fPIC -DPIC -o DSTree_stages.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o DSTree_util.lo -I/usr/include/mpi ar rv ../../libspooles.a DSTree_*.o a - DSTree_basics.o a - DSTree_init.o a - DSTree_instance.o a - DSTree_IO.o a - DSTree_stages.o a - DSTree_util.o rm -f DSTree_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/DSTree' cd DV ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/DV' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/DV/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/DV/src' makeG:21: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o DV_basics.o -I/usr/include/mpi cc -c -O2 init.c -o DV_init.o -I/usr/include/mpi cc -c -O2 instance.c -o DV_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o DV_IO.o -I/usr/include/mpi cc -c -O2 profile.c -o DV_profile.o -I/usr/include/mpi cc -c -O2 util.c -o DV_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o DV_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o DV_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o DV_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o DV_IO.lo -I/usr/include/mpi cc -c -O2 profile.c -fPIC -DPIC -o DV_profile.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o DV_util.lo -I/usr/include/mpi ar rv ../../libspooles.a DV_*.o a - DV_basics.o a - DV_init.o a - DV_instance.o a - DV_IO.o a - DV_profile.o a - DV_util.o rm -f DV_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/DV/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DV/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/DV' cd DenseMtx ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/DenseMtx' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/DenseMtx/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/DenseMtx/src' makeG:23: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o DenseMtx_basics.o -I/usr/include/mpi cc -c -O2 init.c -o DenseMtx_init.o -I/usr/include/mpi cc -c -O2 initAsSubmtx.c -o DenseMtx_initAsSubmtx.o -I/usr/include/mpi cc -c -O2 instance.c -o DenseMtx_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o DenseMtx_IO.o -I/usr/include/mpi cc -c -O2 permute.c -o DenseMtx_permute.o -I/usr/include/mpi cc -c -O2 scale.c -o DenseMtx_scale.o -I/usr/include/mpi cc -c -O2 util.c -o DenseMtx_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o DenseMtx_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o DenseMtx_init.lo -I/usr/include/mpi cc -c -O2 initAsSubmtx.c -fPIC -DPIC -o DenseMtx_initAsSubmtx.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o DenseMtx_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o DenseMtx_IO.lo -I/usr/include/mpi cc -c -O2 permute.c -fPIC -DPIC -o DenseMtx_permute.lo -I/usr/include/mpi cc -c -O2 scale.c -fPIC -DPIC -o DenseMtx_scale.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o DenseMtx_util.lo -I/usr/include/mpi ar rv ../../libspooles.a DenseMtx_*.o a - DenseMtx_basics.o a - DenseMtx_initAsSubmtx.o a - DenseMtx_init.o a - DenseMtx_instance.o a - DenseMtx_IO.o a - DenseMtx_permute.o a - DenseMtx_scale.o a - DenseMtx_util.o rm -f DenseMtx_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/DenseMtx/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/DenseMtx/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/DenseMtx' cd Drand ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Drand' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Drand/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Drand/src' makeG:18: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Drand_basics.o -I/usr/include/mpi cc -c -O2 init.c -o Drand_init.o -I/usr/include/mpi cc -c -O2 util.c -o Drand_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Drand_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Drand_init.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Drand_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Drand_*.o a - Drand_basics.o a - Drand_init.o a - Drand_util.o rm -f Drand_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Drand/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Drand/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Drand' cd EGraph ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/EGraph' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/EGraph/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/EGraph/src' makeG:20: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o EGraph_basics.o -I/usr/include/mpi cc -c -O2 init.c -o EGraph_init.o -I/usr/include/mpi cc -c -O2 IO.c -o EGraph_IO.o -I/usr/include/mpi cc -c -O2 mkAdjGraph.c -o EGraph_mkAdjGraph.o -I/usr/include/mpi cc -c -O2 misc.c -o EGraph_misc.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o EGraph_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o EGraph_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o EGraph_IO.lo -I/usr/include/mpi cc -c -O2 mkAdjGraph.c -fPIC -DPIC -o EGraph_mkAdjGraph.lo -I/usr/include/mpi cc -c -O2 misc.c -fPIC -DPIC -o EGraph_misc.lo -I/usr/include/mpi ar rv ../../libspooles.a EGraph_*.o a - EGraph_basics.o a - EGraph_init.o a - EGraph_IO.o a - EGraph_misc.o a - EGraph_mkAdjGraph.o rm -f EGraph_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/EGraph' cd ETree ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/ETree' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/ETree/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/ETree/src' makeG:30: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 IO.c -o ETree_IO.o -I/usr/include/mpi cc -c -O2 basics.c -o ETree_basics.o -I/usr/include/mpi cc -c -O2 compress.c -o ETree_compress.o -I/usr/include/mpi cc -c -O2 init.c -o ETree_init.o -I/usr/include/mpi cc -c -O2 initFromSubtree.c -o ETree_initFromSubtree.o -I/usr/include/mpi cc -c -O2 instance.c -o ETree_instance.o -I/usr/include/mpi cc -c -O2 justify.c -o ETree_justify.o -I/usr/include/mpi cc -c -O2 maps.c -o ETree_maps.o -I/usr/include/mpi cc -c -O2 metrics.c -o ETree_metrics.o -I/usr/include/mpi cc -c -O2 ms.c -o ETree_ms.o -I/usr/include/mpi cc -c -O2 permute.c -o ETree_permute.o -I/usr/include/mpi cc -c -O2 semi.c -o ETree_semi.o -I/usr/include/mpi cc -c -O2 storage.c -o ETree_storage.o -I/usr/include/mpi cc -c -O2 transform.c -o ETree_transform.o -I/usr/include/mpi transform.c: In function ‘ETree_mergeFrontsOne’: transform.c:294: warning: passing argument 2 of ‘IVinit’ makes integer from pointer without a cast transform.c: In function ‘ETree_mergeFrontsAll’: transform.c:456: warning: passing argument 2 of ‘IVinit’ makes integer from pointer without a cast transform.c: In function ‘ETree_mergeFrontsAny’: transform.c:617: warning: passing argument 2 of ‘IVinit’ makes integer from pointer without a cast cc -c -O2 util.c -o ETree_util.o -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o ETree_IO.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o ETree_basics.lo -I/usr/include/mpi cc -c -O2 compress.c -fPIC -DPIC -o ETree_compress.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o ETree_init.lo -I/usr/include/mpi cc -c -O2 initFromSubtree.c -fPIC -DPIC -o ETree_initFromSubtree.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o ETree_instance.lo -I/usr/include/mpi cc -c -O2 justify.c -fPIC -DPIC -o ETree_justify.lo -I/usr/include/mpi cc -c -O2 maps.c -fPIC -DPIC -o ETree_maps.lo -I/usr/include/mpi cc -c -O2 metrics.c -fPIC -DPIC -o ETree_metrics.lo -I/usr/include/mpi cc -c -O2 ms.c -fPIC -DPIC -o ETree_ms.lo -I/usr/include/mpi cc -c -O2 permute.c -fPIC -DPIC -o ETree_permute.lo -I/usr/include/mpi cc -c -O2 semi.c -fPIC -DPIC -o ETree_semi.lo -I/usr/include/mpi cc -c -O2 storage.c -fPIC -DPIC -o ETree_storage.lo -I/usr/include/mpi cc -c -O2 transform.c -fPIC -DPIC -o ETree_transform.lo -I/usr/include/mpi transform.c: In function ‘ETree_mergeFrontsOne’: transform.c:294: warning: passing argument 2 of ‘IVinit’ makes integer from pointer without a cast transform.c: In function ‘ETree_mergeFrontsAll’: transform.c:456: warning: passing argument 2 of ‘IVinit’ makes integer from pointer without a cast transform.c: In function ‘ETree_mergeFrontsAny’: transform.c:617: warning: passing argument 2 of ‘IVinit’ makes integer from pointer without a cast cc -c -O2 util.c -fPIC -DPIC -o ETree_util.lo -I/usr/include/mpi ar rv ../../libspooles.a ETree_*.o a - ETree_basics.o a - ETree_compress.o a - ETree_initFromSubtree.o a - ETree_init.o a - ETree_instance.o a - ETree_IO.o a - ETree_justify.o a - ETree_maps.o a - ETree_metrics.o a - ETree_ms.o a - ETree_permute.o a - ETree_semi.o a - ETree_storage.o a - ETree_transform.o a - ETree_util.o rm -f ETree_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/ETree/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ETree/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ETree' cd FrontMtx ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/FrontMtx/src' makeG:34: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o FrontMtx_basics.o -I/usr/include/mpi cc -c -O2 factor.c -o FrontMtx_factor.o -I/usr/include/mpi cc -c -O2 factorUtil.c -o FrontMtx_factorUtil.o -I/usr/include/mpi cc -c -O2 init.c -o FrontMtx_init.o -I/usr/include/mpi cc -c -O2 instance.c -o FrontMtx_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o FrontMtx_IO.o -I/usr/include/mpi cc -c -O2 loadEntries.c -o FrontMtx_loadEntries.o -I/usr/include/mpi cc -c -O2 permute.c -o FrontMtx_permute.o -I/usr/include/mpi cc -c -O2 postponed.c -o FrontMtx_postponed.o -I/usr/include/mpi cc -c -O2 postProcess.c -o FrontMtx_postProcess.o -I/usr/include/mpi cc -c -O2 QRfactor.c -o FrontMtx_QRfactor.o -I/usr/include/mpi cc -c -O2 QRsolve.c -o FrontMtx_QRsolve.o -I/usr/include/mpi cc -c -O2 QRutil.c -o FrontMtx_QRutil.o -I/usr/include/mpi cc -c -O2 solve.c -o FrontMtx_solve.o -I/usr/include/mpi cc -c -O2 solveUtil.c -o FrontMtx_solveUtil.o -I/usr/include/mpi cc -c -O2 split.c -o FrontMtx_split.o -I/usr/include/mpi cc -c -O2 storeFront.c -o FrontMtx_storeFront.o -I/usr/include/mpi cc -c -O2 update.c -o FrontMtx_update.o -I/usr/include/mpi cc -c -O2 util.c -o FrontMtx_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o FrontMtx_basics.lo -I/usr/include/mpi cc -c -O2 factor.c -fPIC -DPIC -o FrontMtx_factor.lo -I/usr/include/mpi cc -c -O2 factorUtil.c -fPIC -DPIC -o FrontMtx_factorUtil.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o FrontMtx_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o FrontMtx_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o FrontMtx_IO.lo -I/usr/include/mpi cc -c -O2 loadEntries.c -fPIC -DPIC -o FrontMtx_loadEntries.lo -I/usr/include/mpi cc -c -O2 permute.c -fPIC -DPIC -o FrontMtx_permute.lo -I/usr/include/mpi cc -c -O2 postponed.c -fPIC -DPIC -o FrontMtx_postponed.lo -I/usr/include/mpi cc -c -O2 postProcess.c -fPIC -DPIC -o FrontMtx_postProcess.lo -I/usr/include/mpi cc -c -O2 QRfactor.c -fPIC -DPIC -o FrontMtx_QRfactor.lo -I/usr/include/mpi cc -c -O2 QRsolve.c -fPIC -DPIC -o FrontMtx_QRsolve.lo -I/usr/include/mpi cc -c -O2 QRutil.c -fPIC -DPIC -o FrontMtx_QRutil.lo -I/usr/include/mpi cc -c -O2 solve.c -fPIC -DPIC -o FrontMtx_solve.lo -I/usr/include/mpi cc -c -O2 solveUtil.c -fPIC -DPIC -o FrontMtx_solveUtil.lo -I/usr/include/mpi cc -c -O2 split.c -fPIC -DPIC -o FrontMtx_split.lo -I/usr/include/mpi cc -c -O2 storeFront.c -fPIC -DPIC -o FrontMtx_storeFront.lo -I/usr/include/mpi cc -c -O2 update.c -fPIC -DPIC -o FrontMtx_update.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o FrontMtx_util.lo -I/usr/include/mpi ar rv ../../libspooles.a FrontMtx_*.o a - FrontMtx_basics.o a - FrontMtx_factor.o a - FrontMtx_factorUtil.o a - FrontMtx_init.o a - FrontMtx_instance.o a - FrontMtx_IO.o a - FrontMtx_loadEntries.o a - FrontMtx_permute.o a - FrontMtx_postponed.o a - FrontMtx_postProcess.o a - FrontMtx_QRfactor.o a - FrontMtx_QRsolve.o a - FrontMtx_QRutil.o a - FrontMtx_solve.o a - FrontMtx_solveUtil.o a - FrontMtx_split.o a - FrontMtx_storeFront.o a - FrontMtx_update.o a - FrontMtx_util.o rm -f FrontMtx_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/FrontMtx' cd GPart ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/GPart' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/GPart/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/GPart/src' makeG:30: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 DDviaFishnet.c -o GPart_DDviaFishnet.o -I/usr/include/mpi cc -c -O2 DDviaProjection.c -o GPart_DDviaProjection.o -I/usr/include/mpi cc -c -O2 DDsepInfo.c -o GPart_DDsepInfo.o -I/usr/include/mpi cc -c -O2 RBviaDDsep.c -o GPart_RBviaDDsep.o -I/usr/include/mpi cc -c -O2 TwoSetViaBKL.c -o GPart_TwoSetViaBKL.o -I/usr/include/mpi cc -c -O2 basics.c -o GPart_basics.o -I/usr/include/mpi cc -c -O2 domSegMap.c -o GPart_domSegMap.o -I/usr/include/mpi cc -c -O2 identifyWideSep.c -o GPart_identifyWideSep.o -I/usr/include/mpi cc -c -O2 init.c -o GPart_init.o -I/usr/include/mpi cc -c -O2 makeYCmap.c -o GPart_makeYCmap.o -I/usr/include/mpi cc -c -O2 smoothBisector.c -o GPart_smoothBisector.o -I/usr/include/mpi cc -c -O2 smoothBy2layers.c -o GPart_smoothBy2layers.o -I/usr/include/mpi cc -c -O2 smoothYSep.c -o GPart_smoothYSep.o -I/usr/include/mpi cc -c -O2 split.c -o GPart_split.o -I/usr/include/mpi cc -c -O2 util.c -o GPart_util.o -I/usr/include/mpi cc -c -O2 DDviaFishnet.c -fPIC -DPIC -o GPart_DDviaFishnet.lo -I/usr/include/mpi cc -c -O2 DDviaProjection.c -fPIC -DPIC -o GPart_DDviaProjection.lo -I/usr/include/mpi cc -c -O2 DDsepInfo.c -fPIC -DPIC -o GPart_DDsepInfo.lo -I/usr/include/mpi cc -c -O2 RBviaDDsep.c -fPIC -DPIC -o GPart_RBviaDDsep.lo -I/usr/include/mpi cc -c -O2 TwoSetViaBKL.c -fPIC -DPIC -o GPart_TwoSetViaBKL.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o GPart_basics.lo -I/usr/include/mpi cc -c -O2 domSegMap.c -fPIC -DPIC -o GPart_domSegMap.lo -I/usr/include/mpi cc -c -O2 identifyWideSep.c -fPIC -DPIC -o GPart_identifyWideSep.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o GPart_init.lo -I/usr/include/mpi cc -c -O2 makeYCmap.c -fPIC -DPIC -o GPart_makeYCmap.lo -I/usr/include/mpi cc -c -O2 smoothBisector.c -fPIC -DPIC -o GPart_smoothBisector.lo -I/usr/include/mpi cc -c -O2 smoothBy2layers.c -fPIC -DPIC -o GPart_smoothBy2layers.lo -I/usr/include/mpi cc -c -O2 smoothYSep.c -fPIC -DPIC -o GPart_smoothYSep.lo -I/usr/include/mpi cc -c -O2 split.c -fPIC -DPIC -o GPart_split.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o GPart_util.lo -I/usr/include/mpi ar rv ../../libspooles.a GPart_*.o a - GPart_basics.o a - GPart_DDsepInfo.o a - GPart_DDviaFishnet.o a - GPart_DDviaProjection.o a - GPart_domSegMap.o a - GPart_identifyWideSep.o a - GPart_init.o a - GPart_makeYCmap.o a - GPart_RBviaDDsep.o a - GPart_smoothBisector.o a - GPart_smoothBy2layers.o a - GPart_smoothYSep.o a - GPart_split.o a - GPart_TwoSetViaBKL.o a - GPart_util.o rm -f GPart_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/GPart/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/GPart/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/GPart' cd Graph ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Graph' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Graph/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Graph/src' makeG:25: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 IO.c -o Graph_IO.o -I/usr/include/mpi cc -c -O2 basics.c -o Graph_basics.o -I/usr/include/mpi cc -c -O2 compress.c -o Graph_compress.o -I/usr/include/mpi cc -c -O2 equivMap.c -o Graph_equivMap.o -I/usr/include/mpi cc -c -O2 expand.c -o Graph_expand.o -I/usr/include/mpi cc -c -O2 fillFromOffsets.c -o Graph_fillFromOffsets.o -I/usr/include/mpi cc -c -O2 init.c -o Graph_init.o -I/usr/include/mpi cc -c -O2 setListsFromOffsets.c -o Graph_setListsFromOffsets.o -I/usr/include/mpi cc -c -O2 util.c -o Graph_util.o -I/usr/include/mpi cc -c -O2 wirebasket.c -o Graph_wirebasket.o -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Graph_IO.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Graph_basics.lo -I/usr/include/mpi cc -c -O2 compress.c -fPIC -DPIC -o Graph_compress.lo -I/usr/include/mpi cc -c -O2 equivMap.c -fPIC -DPIC -o Graph_equivMap.lo -I/usr/include/mpi cc -c -O2 expand.c -fPIC -DPIC -o Graph_expand.lo -I/usr/include/mpi cc -c -O2 fillFromOffsets.c -fPIC -DPIC -o Graph_fillFromOffsets.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Graph_init.lo -I/usr/include/mpi cc -c -O2 setListsFromOffsets.c -fPIC -DPIC -o Graph_setListsFromOffsets.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Graph_util.lo -I/usr/include/mpi cc -c -O2 wirebasket.c -fPIC -DPIC -o Graph_wirebasket.lo -I/usr/include/mpi ar rv ../../libspooles.a Graph_*.o a - Graph_basics.o a - Graph_compress.o a - Graph_equivMap.o a - Graph_expand.o a - Graph_fillFromOffsets.o a - Graph_init.o a - Graph_IO.o a - Graph_setListsFromOffsets.o a - Graph_util.o a - Graph_wirebasket.o rm -f Graph_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Graph/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Graph/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Graph' cd I2Ohash ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/I2Ohash/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o I2Ohash_basics.o -I/usr/include/mpi cc -c -O2 init.c -o I2Ohash_init.o -I/usr/include/mpi cc -c -O2 IO.c -o I2Ohash_IO.o -I/usr/include/mpi cc -c -O2 util.c -o I2Ohash_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o I2Ohash_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o I2Ohash_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o I2Ohash_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o I2Ohash_util.lo -I/usr/include/mpi ar rv ../../libspooles.a I2Ohash_*.o a - I2Ohash_basics.o a - I2Ohash_init.o a - I2Ohash_IO.o a - I2Ohash_util.o rm -f I2Ohash_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/I2Ohash' cd IIheap ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/IIheap' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/IIheap/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/IIheap/src' makeG:16: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o IIheap_basics.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o IIheap_basics.lo -I/usr/include/mpi ar rv ../../libspooles.a IIheap_*.o a - IIheap_basics.o rm -f IIheap_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/IIheap/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IIheap/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/IIheap' cd IV ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/IV' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/IV/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/IV/src' makeG:20: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 IO.c -o IV_IO.o -I/usr/include/mpi cc -c -O2 basics.c -o IV_basics.o -I/usr/include/mpi cc -c -O2 init.c -o IV_init.o -I/usr/include/mpi cc -c -O2 instance.c -o IV_instance.o -I/usr/include/mpi cc -c -O2 util.c -o IV_util.o -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o IV_IO.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o IV_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o IV_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o IV_instance.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o IV_util.lo -I/usr/include/mpi ar rv ../../libspooles.a IV_*.o a - IV_basics.o a - IV_init.o a - IV_instance.o a - IV_IO.o a - IV_util.o rm -f IV_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/IV/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IV/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/IV' cd IVL ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/IVL' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/IVL/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/IVL/src' makeG:23: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 IO.c -o IVL_IO.o -I/usr/include/mpi cc -c -O2 basics.c -o IVL_basics.o -I/usr/include/mpi cc -c -O2 init.c -o IVL_init.o -I/usr/include/mpi cc -c -O2 instance.c -o IVL_instance.o -I/usr/include/mpi cc -c -O2 listmanip.c -o IVL_listmanip.o -I/usr/include/mpi cc -c -O2 misc.c -o IVL_misc.o -I/usr/include/mpi cc -c -O2 subIVL.c -o IVL_subIVL.o -I/usr/include/mpi cc -c -O2 util.c -o IVL_util.o -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o IVL_IO.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o IVL_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o IVL_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o IVL_instance.lo -I/usr/include/mpi cc -c -O2 listmanip.c -fPIC -DPIC -o IVL_listmanip.lo -I/usr/include/mpi cc -c -O2 misc.c -fPIC -DPIC -o IVL_misc.lo -I/usr/include/mpi cc -c -O2 subIVL.c -fPIC -DPIC -o IVL_subIVL.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o IVL_util.lo -I/usr/include/mpi ar rv ../../libspooles.a IVL_*.o a - IVL_basics.o a - IVL_init.o a - IVL_instance.o a - IVL_IO.o a - IVL_listmanip.o a - IVL_misc.o a - IVL_subIVL.o a - IVL_util.o rm -f IVL_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/IVL/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/IVL/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/IVL' cd Ideq ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Ideq' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Ideq/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Ideq/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Ideq_basics.o -I/usr/include/mpi cc -c -O2 IO.c -o Ideq_IO.o -I/usr/include/mpi cc -c -O2 resize.c -o Ideq_resize.o -I/usr/include/mpi cc -c -O2 util.c -o Ideq_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Ideq_basics.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Ideq_IO.lo -I/usr/include/mpi cc -c -O2 resize.c -fPIC -DPIC -o Ideq_resize.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Ideq_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Ideq_*.o a - Ideq_basics.o a - Ideq_IO.o a - Ideq_resize.o a - Ideq_util.o rm -f Ideq_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Ideq/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Ideq/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Ideq' cd InpMtx ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/InpMtx/src' makeG:32: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 adjForATA.c -o InpMtx_adjForATA.o -I/usr/include/mpi cc -c -O2 basics.c -o InpMtx_basics.o -I/usr/include/mpi cc -c -O2 extract.c -o InpMtx_extract.o -I/usr/include/mpi cc -c -O2 fullAdj.c -o InpMtx_fullAdj.o -I/usr/include/mpi cc -c -O2 gmmm.c -o InpMtx_gmmm.o -I/usr/include/mpi cc -c -O2 gmvm.c -o InpMtx_gmvm.o -I/usr/include/mpi cc -c -O2 init.c -o InpMtx_init.o -I/usr/include/mpi cc -c -O2 input.c -o InpMtx_input.o -I/usr/include/mpi cc -c -O2 instance.c -o InpMtx_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o InpMtx_IO.o -I/usr/include/mpi cc -c -O2 map.c -o InpMtx_map.o -I/usr/include/mpi cc -c -O2 mvm.c -o InpMtx_mvm.o -I/usr/include/mpi cc -c -O2 mvmVector.c -o InpMtx_mvmVector.o -I/usr/include/mpi cc -c -O2 permute.c -o InpMtx_permute.o -I/usr/include/mpi cc -c -O2 profile.c -o InpMtx_profile.o -I/usr/include/mpi cc -c -O2 support.c -o InpMtx_support.o -I/usr/include/mpi cc -c -O2 util.c -o InpMtx_util.o -I/usr/include/mpi cc -c -O2 adjForATA.c -fPIC -DPIC -o InpMtx_adjForATA.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o InpMtx_basics.lo -I/usr/include/mpi cc -c -O2 extract.c -fPIC -DPIC -o InpMtx_extract.lo -I/usr/include/mpi cc -c -O2 fullAdj.c -fPIC -DPIC -o InpMtx_fullAdj.lo -I/usr/include/mpi cc -c -O2 gmmm.c -fPIC -DPIC -o InpMtx_gmmm.lo -I/usr/include/mpi cc -c -O2 gmvm.c -fPIC -DPIC -o InpMtx_gmvm.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o InpMtx_init.lo -I/usr/include/mpi cc -c -O2 input.c -fPIC -DPIC -o InpMtx_input.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o InpMtx_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o InpMtx_IO.lo -I/usr/include/mpi cc -c -O2 map.c -fPIC -DPIC -o InpMtx_map.lo -I/usr/include/mpi cc -c -O2 mvm.c -fPIC -DPIC -o InpMtx_mvm.lo -I/usr/include/mpi cc -c -O2 mvmVector.c -fPIC -DPIC -o InpMtx_mvmVector.lo -I/usr/include/mpi cc -c -O2 permute.c -fPIC -DPIC -o InpMtx_permute.lo -I/usr/include/mpi cc -c -O2 profile.c -fPIC -DPIC -o InpMtx_profile.lo -I/usr/include/mpi cc -c -O2 support.c -fPIC -DPIC -o InpMtx_support.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o InpMtx_util.lo -I/usr/include/mpi ar rv ../../libspooles.a InpMtx_*.o a - InpMtx_adjForATA.o a - InpMtx_basics.o a - InpMtx_extract.o a - InpMtx_fullAdj.o a - InpMtx_gmmm.o a - InpMtx_gmvm.o a - InpMtx_init.o a - InpMtx_input.o a - InpMtx_instance.o a - InpMtx_IO.o a - InpMtx_map.o a - InpMtx_mvm.o a - InpMtx_mvmVector.o a - InpMtx_permute.o a - InpMtx_profile.o a - InpMtx_support.o a - InpMtx_util.o rm -f InpMtx_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/InpMtx' cd Lock ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Lock' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Lock/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Lock/src' makeG:18: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Lock_basics.o -I/usr/include/mpi cc -c -O2 init.c -o Lock_init.o -I/usr/include/mpi cc -c -O2 util.c -o Lock_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Lock_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Lock_init.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Lock_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Lock_*.o a - Lock_basics.o a - Lock_init.o a - Lock_util.o rm -f Lock_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Lock/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Lock/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Lock' cd MSMD ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/MSMD' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/MSMD/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/MSMD/src' makeG:27: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o MSMD_basics.o -I/usr/include/mpi cc -c -O2 cleanReachSet.c -o MSMD_cleanReachSet.o -I/usr/include/mpi cc -c -O2 eliminate.c -o MSMD_eliminate.o -I/usr/include/mpi cc -c -O2 fillPerms.c -o MSMD_fillPerms.o -I/usr/include/mpi cc -c -O2 findInodes.c -o MSMD_findInodes.o -I/usr/include/mpi cc -c -O2 frontETree.c -o MSMD_frontETree.o -I/usr/include/mpi cc -c -O2 init.c -o MSMD_init.o -I/usr/include/mpi cc -c -O2 makeSchurComplement.c -o MSMD_makeSchurComplement.o -I/usr/include/mpi cc -c -O2 MSMDinfo.c -o MSMD_MSMDinfo.o -I/usr/include/mpi cc -c -O2 MSMDvtx.c -o MSMD_MSMDvtx.o -I/usr/include/mpi cc -c -O2 order.c -o MSMD_order.o -I/usr/include/mpi cc -c -O2 update.c -o MSMD_update.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o MSMD_basics.lo -I/usr/include/mpi cc -c -O2 cleanReachSet.c -fPIC -DPIC -o MSMD_cleanReachSet.lo -I/usr/include/mpi cc -c -O2 eliminate.c -fPIC -DPIC -o MSMD_eliminate.lo -I/usr/include/mpi cc -c -O2 fillPerms.c -fPIC -DPIC -o MSMD_fillPerms.lo -I/usr/include/mpi cc -c -O2 findInodes.c -fPIC -DPIC -o MSMD_findInodes.lo -I/usr/include/mpi cc -c -O2 frontETree.c -fPIC -DPIC -o MSMD_frontETree.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o MSMD_init.lo -I/usr/include/mpi cc -c -O2 makeSchurComplement.c -fPIC -DPIC -o MSMD_makeSchurComplement.lo -I/usr/include/mpi cc -c -O2 MSMDinfo.c -fPIC -DPIC -o MSMD_MSMDinfo.lo -I/usr/include/mpi cc -c -O2 MSMDvtx.c -fPIC -DPIC -o MSMD_MSMDvtx.lo -I/usr/include/mpi cc -c -O2 order.c -fPIC -DPIC -o MSMD_order.lo -I/usr/include/mpi cc -c -O2 update.c -fPIC -DPIC -o MSMD_update.lo -I/usr/include/mpi ar rv ../../libspooles.a MSMD_*.o a - MSMD_basics.o a - MSMD_cleanReachSet.o a - MSMD_eliminate.o a - MSMD_fillPerms.o a - MSMD_findInodes.o a - MSMD_frontETree.o a - MSMD_init.o a - MSMD_makeSchurComplement.o a - MSMD_MSMDinfo.o a - MSMD_MSMDvtx.o a - MSMD_order.o a - MSMD_update.o rm -f MSMD_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/MSMD' cd Network ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Network' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Network/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Network/src' makeG:23: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 addArc.c -o Network_addArc.o -I/usr/include/mpi cc -c -O2 augmentPath.c -o Network_augmentPath.o -I/usr/include/mpi cc -c -O2 basics.c -o Network_basics.o -I/usr/include/mpi cc -c -O2 findAugmentingPath.c -o Network_findAugmentingPath.o -I/usr/include/mpi cc -c -O2 findMaxFlow.c -o Network_findMaxFlow.o -I/usr/include/mpi cc -c -O2 findMincut.c -o Network_findMincut.o -I/usr/include/mpi cc -c -O2 init.c -o Network_init.o -I/usr/include/mpi cc -c -O2 IO.c -o Network_IO.o -I/usr/include/mpi cc -c -O2 addArc.c -fPIC -DPIC -o Network_addArc.lo -I/usr/include/mpi cc -c -O2 augmentPath.c -fPIC -DPIC -o Network_augmentPath.lo -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Network_basics.lo -I/usr/include/mpi cc -c -O2 findAugmentingPath.c -fPIC -DPIC -o Network_findAugmentingPath.lo -I/usr/include/mpi cc -c -O2 findMaxFlow.c -fPIC -DPIC -o Network_findMaxFlow.lo -I/usr/include/mpi cc -c -O2 findMincut.c -fPIC -DPIC -o Network_findMincut.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Network_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Network_IO.lo -I/usr/include/mpi ar rv ../../libspooles.a Network_*.o a - Network_addArc.o a - Network_augmentPath.o a - Network_basics.o a - Network_findAugmentingPath.o a - Network_findMaxFlow.o a - Network_findMincut.o a - Network_init.o a - Network_IO.o rm -f Network_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Network/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Network/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Network' cd PatchAndGoInfo ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/src' makeG:17: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o PatchAndGoInfo_basics.o -I/usr/include/mpi cc -c -O2 init.c -o PatchAndGoInfo_init.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o PatchAndGoInfo_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o PatchAndGoInfo_init.lo -I/usr/include/mpi ar rv ../../libspooles.a PatchAndGoInfo_*.o a - PatchAndGoInfo_basics.o a - PatchAndGoInfo_init.o rm -f PatchAndGoInfo_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/PatchAndGoInfo' cd Pencil ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Pencil' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Pencil/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Pencil/src' makeG:22: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Pencil_basics.o -I/usr/include/mpi cc -c -O2 init.c -o Pencil_init.o -I/usr/include/mpi cc -c -O2 IO.c -o Pencil_IO.o -I/usr/include/mpi cc -c -O2 mmm.c -o Pencil_mmm.o -I/usr/include/mpi cc -c -O2 permute.c -o Pencil_permute.o -I/usr/include/mpi cc -c -O2 setup.c -o Pencil_setup.o -I/usr/include/mpi cc -c -O2 util.c -o Pencil_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Pencil_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Pencil_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Pencil_IO.lo -I/usr/include/mpi cc -c -O2 mmm.c -fPIC -DPIC -o Pencil_mmm.lo -I/usr/include/mpi cc -c -O2 permute.c -fPIC -DPIC -o Pencil_permute.lo -I/usr/include/mpi cc -c -O2 setup.c -fPIC -DPIC -o Pencil_setup.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Pencil_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Pencil_*.o a - Pencil_basics.o a - Pencil_init.o a - Pencil_IO.o a - Pencil_mmm.o a - Pencil_permute.o a - Pencil_setup.o a - Pencil_util.o rm -f Pencil_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Pencil/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Pencil/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Pencil' cd Perm ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Perm' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Perm/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Perm/src' makeG:20: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Perm_basics.o -I/usr/include/mpi cc -c -O2 compress.c -o Perm_compress.o -I/usr/include/mpi cc -c -O2 init.c -o Perm_init.o -I/usr/include/mpi cc -c -O2 IO.c -o Perm_IO.o -I/usr/include/mpi cc -c -O2 util.c -o Perm_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Perm_basics.lo -I/usr/include/mpi cc -c -O2 compress.c -fPIC -DPIC -o Perm_compress.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Perm_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Perm_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Perm_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Perm_*.o a - Perm_basics.o a - Perm_compress.o a - Perm_init.o a - Perm_IO.o a - Perm_util.o rm -f Perm_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Perm/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Perm/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Perm' cd SemiImplMtx ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/SemiImplMtx/src' makeG:20: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o SemiImplMtx_basics.o -I/usr/include/mpi cc -c -O2 init.c -o SemiImplMtx_init.o -I/usr/include/mpi cc -c -O2 IO.c -o SemiImplMtx_IO.o -I/usr/include/mpi cc -c -O2 solve.c -o SemiImplMtx_solve.o -I/usr/include/mpi cc -c -O2 util.c -o SemiImplMtx_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o SemiImplMtx_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o SemiImplMtx_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o SemiImplMtx_IO.lo -I/usr/include/mpi cc -c -O2 solve.c -fPIC -DPIC -o SemiImplMtx_solve.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o SemiImplMtx_util.lo -I/usr/include/mpi ar rv ../../libspooles.a SemiImplMtx_*.o a - SemiImplMtx_basics.o a - SemiImplMtx_init.o a - SemiImplMtx_IO.o a - SemiImplMtx_solve.o a - SemiImplMtx_util.o rm -f SemiImplMtx_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SemiImplMtx' cd SolveMap ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/SolveMap' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/SolveMap/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/SolveMap/src' makeG:22: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o SolveMap_basics.o -I/usr/include/mpi cc -c -O2 init.c -o SolveMap_init.o -I/usr/include/mpi cc -c -O2 instance.c -o SolveMap_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o SolveMap_IO.o -I/usr/include/mpi cc -c -O2 maps.c -o SolveMap_maps.o -I/usr/include/mpi cc -c -O2 setup.c -o SolveMap_setup.o -I/usr/include/mpi cc -c -O2 util.c -o SolveMap_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o SolveMap_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o SolveMap_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o SolveMap_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o SolveMap_IO.lo -I/usr/include/mpi cc -c -O2 maps.c -fPIC -DPIC -o SolveMap_maps.lo -I/usr/include/mpi cc -c -O2 setup.c -fPIC -DPIC -o SolveMap_setup.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o SolveMap_util.lo -I/usr/include/mpi ar rv ../../libspooles.a SolveMap_*.o a - SolveMap_basics.o a - SolveMap_init.o a - SolveMap_instance.o a - SolveMap_IO.o a - SolveMap_maps.o a - SolveMap_setup.o a - SolveMap_util.o rm -f SolveMap_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/SolveMap/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SolveMap/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SolveMap' cd SubMtx ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/SubMtx/src' makeG:29: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o SubMtx_basics.o -I/usr/include/mpi cc -c -O2 init.c -o SubMtx_init.o -I/usr/include/mpi cc -c -O2 initRandom.c -o SubMtx_initRandom.o -I/usr/include/mpi cc -c -O2 instance.c -o SubMtx_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o SubMtx_IO.o -I/usr/include/mpi cc -c -O2 scalevec.c -o SubMtx_scalevec.o -I/usr/include/mpi cc -c -O2 solve.c -o SubMtx_solve.o -I/usr/include/mpi cc -c -O2 solveH.c -o SubMtx_solveH.o -I/usr/include/mpi cc -c -O2 solveT.c -o SubMtx_solveT.o -I/usr/include/mpi cc -c -O2 solveupd.c -o SubMtx_solveupd.o -I/usr/include/mpi cc -c -O2 solveupdH.c -o SubMtx_solveupdH.o -I/usr/include/mpi cc -c -O2 solveupdT.c -o SubMtx_solveupdT.o -I/usr/include/mpi cc -c -O2 sort.c -o SubMtx_sort.o -I/usr/include/mpi cc -c -O2 util.c -o SubMtx_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o SubMtx_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o SubMtx_init.lo -I/usr/include/mpi cc -c -O2 initRandom.c -fPIC -DPIC -o SubMtx_initRandom.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o SubMtx_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o SubMtx_IO.lo -I/usr/include/mpi cc -c -O2 scalevec.c -fPIC -DPIC -o SubMtx_scalevec.lo -I/usr/include/mpi cc -c -O2 solve.c -fPIC -DPIC -o SubMtx_solve.lo -I/usr/include/mpi cc -c -O2 solveH.c -fPIC -DPIC -o SubMtx_solveH.lo -I/usr/include/mpi cc -c -O2 solveT.c -fPIC -DPIC -o SubMtx_solveT.lo -I/usr/include/mpi cc -c -O2 solveupd.c -fPIC -DPIC -o SubMtx_solveupd.lo -I/usr/include/mpi cc -c -O2 solveupdH.c -fPIC -DPIC -o SubMtx_solveupdH.lo -I/usr/include/mpi cc -c -O2 solveupdT.c -fPIC -DPIC -o SubMtx_solveupdT.lo -I/usr/include/mpi cc -c -O2 sort.c -fPIC -DPIC -o SubMtx_sort.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o SubMtx_util.lo -I/usr/include/mpi ar rv ../../libspooles.a SubMtx_*.o a - SubMtx_basics.o a - SubMtx_init.o a - SubMtx_initRandom.o a - SubMtx_instance.o a - SubMtx_IO.o a - SubMtx_scalevec.o a - SubMtx_solveH.o a - SubMtx_solve.o a - SubMtx_solveT.o a - SubMtx_solveupdH.o a - SubMtx_solveupd.o a - SubMtx_solveupdT.o a - SubMtx_sort.o a - SubMtx_util.o rm -f SubMtx_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtx' cd SubMtxList ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxList' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxList/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxList/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o SubMtxList_basics.o -I/usr/include/mpi cc -c -O2 init.c -o SubMtxList_init.o -I/usr/include/mpi cc -c -O2 IO.c -o SubMtxList_IO.o -I/usr/include/mpi cc -c -O2 util.c -o SubMtxList_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o SubMtxList_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o SubMtxList_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o SubMtxList_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o SubMtxList_util.lo -I/usr/include/mpi ar rv ../../libspooles.a SubMtxList_*.o a - SubMtxList_basics.o a - SubMtxList_init.o a - SubMtxList_IO.o a - SubMtxList_util.o rm -f SubMtxList_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxList/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxList/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxList' cd SubMtxManager ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxManager' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxManager/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/SubMtxManager/src' makeG:19: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o SubMtxManager_basics.o -I/usr/include/mpi cc -c -O2 init.c -o SubMtxManager_init.o -I/usr/include/mpi cc -c -O2 IO.c -o SubMtxManager_IO.o -I/usr/include/mpi cc -c -O2 util.c -o SubMtxManager_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o SubMtxManager_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o SubMtxManager_init.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o SubMtxManager_IO.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o SubMtxManager_util.lo -I/usr/include/mpi ar rv ../../libspooles.a SubMtxManager_*.o a - SubMtxManager_basics.o a - SubMtxManager_init.o a - SubMtxManager_IO.o a - SubMtxManager_util.o rm -f SubMtxManager_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxManager/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxManager/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SubMtxManager' cd SymbFac ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/SymbFac/src' makeG:16: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 symbfac.c -o SymbFac_symbfac.o -I/usr/include/mpi cc -c -O2 symbfac.c -fPIC -DPIC -o SymbFac_symbfac.lo -I/usr/include/mpi ar rv ../../libspooles.a SymbFac_*.o a - SymbFac_symbfac.o rm -f SymbFac_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/SymbFac' cd Tree ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Tree' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Tree/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Tree/src' makeG:29: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o Tree_basics.o -I/usr/include/mpi cc -c -O2 compress.c -o Tree_compress.o -I/usr/include/mpi cc -c -O2 draw.c -o Tree_draw.o -I/usr/include/mpi cc -c -O2 getCoords.c -o Tree_getCoords.o -I/usr/include/mpi cc -c -O2 init.c -o Tree_init.o -I/usr/include/mpi cc -c -O2 instance.c -o Tree_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o Tree_IO.o -I/usr/include/mpi cc -c -O2 justify.c -o Tree_justify.o -I/usr/include/mpi cc -c -O2 maximizeGain.c -o Tree_maximizeGain.o -I/usr/include/mpi cc -c -O2 metrics.c -o Tree_metrics.o -I/usr/include/mpi cc -c -O2 perms.c -o Tree_perms.o -I/usr/include/mpi cc -c -O2 permute.c -o Tree_permute.o -I/usr/include/mpi cc -c -O2 subtree.c -o Tree_subtree.o -I/usr/include/mpi cc -c -O2 util.c -o Tree_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o Tree_basics.lo -I/usr/include/mpi cc -c -O2 compress.c -fPIC -DPIC -o Tree_compress.lo -I/usr/include/mpi cc -c -O2 draw.c -fPIC -DPIC -o Tree_draw.lo -I/usr/include/mpi cc -c -O2 getCoords.c -fPIC -DPIC -o Tree_getCoords.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o Tree_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o Tree_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o Tree_IO.lo -I/usr/include/mpi cc -c -O2 justify.c -fPIC -DPIC -o Tree_justify.lo -I/usr/include/mpi cc -c -O2 maximizeGain.c -fPIC -DPIC -o Tree_maximizeGain.lo -I/usr/include/mpi cc -c -O2 metrics.c -fPIC -DPIC -o Tree_metrics.lo -I/usr/include/mpi cc -c -O2 perms.c -fPIC -DPIC -o Tree_perms.lo -I/usr/include/mpi cc -c -O2 permute.c -fPIC -DPIC -o Tree_permute.lo -I/usr/include/mpi cc -c -O2 subtree.c -fPIC -DPIC -o Tree_subtree.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o Tree_util.lo -I/usr/include/mpi ar rv ../../libspooles.a Tree_*.o a - Tree_basics.o a - Tree_compress.o a - Tree_draw.o a - Tree_getCoords.o a - Tree_init.o a - Tree_instance.o a - Tree_IO.o a - Tree_justify.o a - Tree_maximizeGain.o a - Tree_metrics.o a - Tree_perms.o a - Tree_permute.o a - Tree_subtree.o a - Tree_util.o rm -f Tree_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Tree/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Tree/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Tree' cd Utilities ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/Utilities' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/Utilities/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/Utilities/src' makeG:30: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 axpy.c -o Utilities_axpy.o -I/usr/include/mpi cc -c -O2 CV.c -o Utilities_CV.o -I/usr/include/mpi cc -c -O2 DV.c -o Utilities_DV.o -I/usr/include/mpi cc -c -O2 FV.c -o Utilities_FV.o -I/usr/include/mpi cc -c -O2 IV.c -o Utilities_IV.o -I/usr/include/mpi cc -c -O2 PCV.c -o Utilities_PCV.o -I/usr/include/mpi cc -c -O2 PDV.c -o Utilities_PDV.o -I/usr/include/mpi cc -c -O2 PFV.c -o Utilities_PFV.o -I/usr/include/mpi cc -c -O2 PIV.c -o Utilities_PIV.o -I/usr/include/mpi cc -c -O2 IP.c -o Utilities_IP.o -I/usr/include/mpi cc -c -O2 I2OP.c -o Utilities_I2OP.o -I/usr/include/mpi cc -c -O2 iohb.c -o Utilities_iohb.o -I/usr/include/mpi iohb.c: In function ‘readHB_info’: iohb.c:269: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_header’: iohb.c:311: warning: cast from pointer to integer of different size iohb.c:312: warning: cast from pointer to integer of different size iohb.c:347: warning: cast from pointer to integer of different size iohb.c:348: warning: cast from pointer to integer of different size iohb.c:349: warning: cast from pointer to integer of different size iohb.c:350: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_mat_double’: iohb.c:457: warning: cast from pointer to integer of different size iohb.c:480: warning: cast from pointer to integer of different size iohb.c:508: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_aux_double’: iohb.c:708: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_mat_char’: iohb.c:1021: warning: cast from pointer to integer of different size iohb.c:1044: warning: cast from pointer to integer of different size iohb.c:1072: warning: cast from pointer to integer of different size iohb.c: In function ‘ParseRfmt’: iohb.c:1632: warning: cast from pointer to integer of different size iohb.c:1642: warning: cast from pointer to integer of different size iohb.c:1646: warning: cast from pointer to integer of different size iohb.c: In function ‘substr’: iohb.c:1709: warning: cast from pointer to integer of different size cc -c -O2 newsort.c -o Utilities_newsort.o -I/usr/include/mpi cc -c -O2 sortAndCompress.c -o Utilities_sortAndCompress.o -I/usr/include/mpi cc -c -O2 ZV.c -o Utilities_ZV.o -I/usr/include/mpi cc -c -O2 axpy.c -fPIC -DPIC -o Utilities_axpy.lo -I/usr/include/mpi cc -c -O2 CV.c -fPIC -DPIC -o Utilities_CV.lo -I/usr/include/mpi cc -c -O2 DV.c -fPIC -DPIC -o Utilities_DV.lo -I/usr/include/mpi cc -c -O2 FV.c -fPIC -DPIC -o Utilities_FV.lo -I/usr/include/mpi cc -c -O2 IV.c -fPIC -DPIC -o Utilities_IV.lo -I/usr/include/mpi cc -c -O2 PCV.c -fPIC -DPIC -o Utilities_PCV.lo -I/usr/include/mpi cc -c -O2 PDV.c -fPIC -DPIC -o Utilities_PDV.lo -I/usr/include/mpi cc -c -O2 PFV.c -fPIC -DPIC -o Utilities_PFV.lo -I/usr/include/mpi cc -c -O2 PIV.c -fPIC -DPIC -o Utilities_PIV.lo -I/usr/include/mpi cc -c -O2 IP.c -fPIC -DPIC -o Utilities_IP.lo -I/usr/include/mpi cc -c -O2 I2OP.c -fPIC -DPIC -o Utilities_I2OP.lo -I/usr/include/mpi cc -c -O2 iohb.c -fPIC -DPIC -o Utilities_iohb.lo -I/usr/include/mpi iohb.c: In function ‘readHB_info’: iohb.c:269: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_header’: iohb.c:311: warning: cast from pointer to integer of different size iohb.c:312: warning: cast from pointer to integer of different size iohb.c:347: warning: cast from pointer to integer of different size iohb.c:348: warning: cast from pointer to integer of different size iohb.c:349: warning: cast from pointer to integer of different size iohb.c:350: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_mat_double’: iohb.c:457: warning: cast from pointer to integer of different size iohb.c:480: warning: cast from pointer to integer of different size iohb.c:508: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_aux_double’: iohb.c:708: warning: cast from pointer to integer of different size iohb.c: In function ‘readHB_mat_char’: iohb.c:1021: warning: cast from pointer to integer of different size iohb.c:1044: warning: cast from pointer to integer of different size iohb.c:1072: warning: cast from pointer to integer of different size iohb.c: In function ‘ParseRfmt’: iohb.c:1632: warning: cast from pointer to integer of different size iohb.c:1642: warning: cast from pointer to integer of different size iohb.c:1646: warning: cast from pointer to integer of different size iohb.c: In function ‘substr’: iohb.c:1709: warning: cast from pointer to integer of different size cc -c -O2 newsort.c -fPIC -DPIC -o Utilities_newsort.lo -I/usr/include/mpi cc -c -O2 sortAndCompress.c -fPIC -DPIC -o Utilities_sortAndCompress.lo -I/usr/include/mpi cc -c -O2 ZV.c -fPIC -DPIC -o Utilities_ZV.lo -I/usr/include/mpi ar rv ../../libspooles.a Utilities_*.o a - Utilities_axpy.o a - Utilities_CV.o a - Utilities_DV.o a - Utilities_FV.o a - Utilities_I2OP.o a - Utilities_iohb.o a - Utilities_IP.o a - Utilities_IV.o a - Utilities_newsort.o a - Utilities_PCV.o a - Utilities_PDV.o a - Utilities_PFV.o a - Utilities_PIV.o a - Utilities_sortAndCompress.o a - Utilities_ZV.o rm -f Utilities_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/Utilities' cd ZV ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/ZV' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/ZV/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/ZV/src' makeG:21: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 basics.c -o ZV_basics.o -I/usr/include/mpi cc -c -O2 init.c -o ZV_init.o -I/usr/include/mpi cc -c -O2 instance.c -o ZV_instance.o -I/usr/include/mpi cc -c -O2 IO.c -o ZV_IO.o -I/usr/include/mpi cc -c -O2 profile.c -o ZV_profile.o -I/usr/include/mpi cc -c -O2 util.c -o ZV_util.o -I/usr/include/mpi cc -c -O2 basics.c -fPIC -DPIC -o ZV_basics.lo -I/usr/include/mpi cc -c -O2 init.c -fPIC -DPIC -o ZV_init.lo -I/usr/include/mpi cc -c -O2 instance.c -fPIC -DPIC -o ZV_instance.lo -I/usr/include/mpi cc -c -O2 IO.c -fPIC -DPIC -o ZV_IO.lo -I/usr/include/mpi cc -c -O2 profile.c -fPIC -DPIC -o ZV_profile.lo -I/usr/include/mpi cc -c -O2 util.c -fPIC -DPIC -o ZV_util.lo -I/usr/include/mpi ar rv ../../libspooles.a ZV_*.o a - ZV_basics.o a - ZV_init.o a - ZV_instance.o a - ZV_IO.o a - ZV_profile.o a - ZV_util.o rm -f ZV_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/ZV/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/ZV/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/ZV' cd misc ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/misc' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/misc/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/misc/src' makeG:26: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 drawGraphEPS.c -o misc_drawGraphEPS.o -I/usr/include/mpi cc -c -O2 fpgrids.c -o misc_fpgrids.o -I/usr/include/mpi cc -c -O2 localND.c -o misc_localND.o -I/usr/include/mpi cc -c -O2 ND.c -o misc_ND.o -I/usr/include/mpi cc -c -O2 ND2.c -o misc_ND2.o -I/usr/include/mpi cc -c -O2 mkNDlinsys.c -o misc_mkNDlinsys.o -I/usr/include/mpi cc -c -O2 mkNDlinsysQR.c -o misc_mkNDlinsysQR.o -I/usr/include/mpi cc -c -O2 orderViaBestOfNDandMS.c -o misc_orderViaBestOfNDandMS.o -I/usr/include/mpi cc -c -O2 orderViaMMD.c -o misc_orderViaMMD.o -I/usr/include/mpi cc -c -O2 orderViaMS.c -o misc_orderViaMS.o -I/usr/include/mpi cc -c -O2 orderViaND.c -o misc_orderViaND.o -I/usr/include/mpi cc -c -O2 drawGraphEPS.c -fPIC -DPIC -o misc_drawGraphEPS.lo -I/usr/include/mpi cc -c -O2 fpgrids.c -fPIC -DPIC -o misc_fpgrids.lo -I/usr/include/mpi cc -c -O2 localND.c -fPIC -DPIC -o misc_localND.lo -I/usr/include/mpi cc -c -O2 ND.c -fPIC -DPIC -o misc_ND.lo -I/usr/include/mpi cc -c -O2 ND2.c -fPIC -DPIC -o misc_ND2.lo -I/usr/include/mpi cc -c -O2 mkNDlinsys.c -fPIC -DPIC -o misc_mkNDlinsys.lo -I/usr/include/mpi cc -c -O2 mkNDlinsysQR.c -fPIC -DPIC -o misc_mkNDlinsysQR.lo -I/usr/include/mpi cc -c -O2 orderViaBestOfNDandMS.c -fPIC -DPIC -o misc_orderViaBestOfNDandMS.lo -I/usr/include/mpi cc -c -O2 orderViaMMD.c -fPIC -DPIC -o misc_orderViaMMD.lo -I/usr/include/mpi cc -c -O2 orderViaMS.c -fPIC -DPIC -o misc_orderViaMS.lo -I/usr/include/mpi cc -c -O2 orderViaND.c -fPIC -DPIC -o misc_orderViaND.lo -I/usr/include/mpi ar rv ../../libspooles.a misc_*.o a - misc_drawGraphEPS.o a - misc_fpgrids.o a - misc_localND.o a - misc_mkNDlinsys.o a - misc_mkNDlinsysQR.o a - misc_ND2.o a - misc_ND.o a - misc_orderViaBestOfNDandMS.o a - misc_orderViaMMD.o a - misc_orderViaMS.o a - misc_orderViaND.o rm -f misc_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/misc/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/misc/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/misc' cd MPI ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/MPI' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/MPI/src' makefile:8: warning: overriding commands for target `.c.a' ../../Make.inc:97: warning: ignoring old commands for target `.c.a' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/MPI/src' makeG:38: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 aggListMPI.c -o spoolesMPI_aggListMPI.o -I/usr/include/mpi cc -c -O2 colmapMPI.c -o spoolesMPI_colmapMPI.o -I/usr/include/mpi cc -c -O2 DenseMtx_gather.c -o spoolesMPI_DenseMtx_gather.o -I/usr/include/mpi cc -c -O2 DenseMtx_scatterAdd.c -o spoolesMPI_DenseMtx_scatterAdd.o -I/usr/include/mpi cc -c -O2 ETree_Bcast.c -o spoolesMPI_ETree_Bcast.o -I/usr/include/mpi cc -c -O2 factorMPI.c -o spoolesMPI_factorMPI.o -I/usr/include/mpi cc -c -O2 fullAdjMPI.c -o spoolesMPI_fullAdjMPI.o -I/usr/include/mpi cc -c -O2 Graph_Bcast.c -o spoolesMPI_Graph_Bcast.o -I/usr/include/mpi cc -c -O2 IVallgather.c -o spoolesMPI_IVallgather.o -I/usr/include/mpi cc -c -O2 IVLallgather.c -o spoolesMPI_IVLallgather.o -I/usr/include/mpi cc -c -O2 IVL_alltoall.c -o spoolesMPI_IVL_alltoall.o -I/usr/include/mpi cc -c -O2 IVL_Bcast.c -o spoolesMPI_IVL_Bcast.o -I/usr/include/mpi cc -c -O2 makeSendRecvIVLs.c -o spoolesMPI_makeSendRecvIVLs.o -I/usr/include/mpi cc -c -O2 MMM.c -o spoolesMPI_MMM.o -I/usr/include/mpi cc -c -O2 postProcess.c -o spoolesMPI_postProcess.o -I/usr/include/mpi cc -c -O2 rowmapMPI.c -o spoolesMPI_rowmapMPI.o -I/usr/include/mpi cc -c -O2 solveMPI.c -o spoolesMPI_solveMPI.o -I/usr/include/mpi cc -c -O2 splitDenseMtx.c -o spoolesMPI_splitDenseMtx.o -I/usr/include/mpi cc -c -O2 splitFrontMtx.c -o spoolesMPI_splitFrontMtx.o -I/usr/include/mpi cc -c -O2 splitInpMtx.c -o spoolesMPI_splitInpMtx.o -I/usr/include/mpi cc -c -O2 splitPencil.c -o spoolesMPI_splitPencil.o -I/usr/include/mpi cc -c -O2 symbfacMPI.c -o spoolesMPI_symbfacMPI.o -I/usr/include/mpi cc -c -O2 utilities.c -o spoolesMPI_utilities.o -I/usr/include/mpi cc -c -O2 aggListMPI.c -fPIC -DPIC -o spoolesMPI_aggListMPI.lo -I/usr/include/mpi cc -c -O2 colmapMPI.c -fPIC -DPIC -o spoolesMPI_colmapMPI.lo -I/usr/include/mpi cc -c -O2 DenseMtx_gather.c -fPIC -DPIC -o spoolesMPI_DenseMtx_gather.lo -I/usr/include/mpi cc -c -O2 DenseMtx_scatterAdd.c -fPIC -DPIC -o spoolesMPI_DenseMtx_scatterAdd.lo -I/usr/include/mpi cc -c -O2 ETree_Bcast.c -fPIC -DPIC -o spoolesMPI_ETree_Bcast.lo -I/usr/include/mpi cc -c -O2 factorMPI.c -fPIC -DPIC -o spoolesMPI_factorMPI.lo -I/usr/include/mpi cc -c -O2 fullAdjMPI.c -fPIC -DPIC -o spoolesMPI_fullAdjMPI.lo -I/usr/include/mpi cc -c -O2 Graph_Bcast.c -fPIC -DPIC -o spoolesMPI_Graph_Bcast.lo -I/usr/include/mpi cc -c -O2 IVallgather.c -fPIC -DPIC -o spoolesMPI_IVallgather.lo -I/usr/include/mpi cc -c -O2 IVLallgather.c -fPIC -DPIC -o spoolesMPI_IVLallgather.lo -I/usr/include/mpi cc -c -O2 IVL_alltoall.c -fPIC -DPIC -o spoolesMPI_IVL_alltoall.lo -I/usr/include/mpi cc -c -O2 IVL_Bcast.c -fPIC -DPIC -o spoolesMPI_IVL_Bcast.lo -I/usr/include/mpi cc -c -O2 makeSendRecvIVLs.c -fPIC -DPIC -o spoolesMPI_makeSendRecvIVLs.lo -I/usr/include/mpi cc -c -O2 MMM.c -fPIC -DPIC -o spoolesMPI_MMM.lo -I/usr/include/mpi cc -c -O2 postProcess.c -fPIC -DPIC -o spoolesMPI_postProcess.lo -I/usr/include/mpi cc -c -O2 rowmapMPI.c -fPIC -DPIC -o spoolesMPI_rowmapMPI.lo -I/usr/include/mpi cc -c -O2 solveMPI.c -fPIC -DPIC -o spoolesMPI_solveMPI.lo -I/usr/include/mpi cc -c -O2 splitDenseMtx.c -fPIC -DPIC -o spoolesMPI_splitDenseMtx.lo -I/usr/include/mpi cc -c -O2 splitFrontMtx.c -fPIC -DPIC -o spoolesMPI_splitFrontMtx.lo -I/usr/include/mpi cc -c -O2 splitInpMtx.c -fPIC -DPIC -o spoolesMPI_splitInpMtx.lo -I/usr/include/mpi cc -c -O2 splitPencil.c -fPIC -DPIC -o spoolesMPI_splitPencil.lo -I/usr/include/mpi cc -c -O2 symbfacMPI.c -fPIC -DPIC -o spoolesMPI_symbfacMPI.lo -I/usr/include/mpi cc -c -O2 utilities.c -fPIC -DPIC -o spoolesMPI_utilities.lo -I/usr/include/mpi ar rv ../../libspooles.a spoolesMPI_*.o a - spoolesMPI_aggListMPI.o a - spoolesMPI_colmapMPI.o a - spoolesMPI_DenseMtx_gather.o a - spoolesMPI_DenseMtx_scatterAdd.o a - spoolesMPI_ETree_Bcast.o a - spoolesMPI_factorMPI.o a - spoolesMPI_fullAdjMPI.o a - spoolesMPI_Graph_Bcast.o a - spoolesMPI_IVallgather.o a - spoolesMPI_IVLallgather.o a - spoolesMPI_IVL_alltoall.o a - spoolesMPI_IVL_Bcast.o a - spoolesMPI_makeSendRecvIVLs.o a - spoolesMPI_MMM.o a - spoolesMPI_postProcess.o a - spoolesMPI_rowmapMPI.o a - spoolesMPI_solveMPI.o a - spoolesMPI_splitDenseMtx.o a - spoolesMPI_splitFrontMtx.o a - spoolesMPI_splitInpMtx.o a - spoolesMPI_splitPencil.o a - spoolesMPI_symbfacMPI.o a - spoolesMPI_utilities.o rm -f spoolesMPI_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/MPI/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MPI/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/MPI' cd MT ; make lib make[2]: Entering directory `/home/hazelsct/spooles-2.2/MT' cd src ; make makeLib make[3]: Entering directory `/home/hazelsct/spooles-2.2/MT/src' perl ../../makeLib > makeG make -f makeG make[4]: Entering directory `/home/hazelsct/spooles-2.2/MT/src' makeG:20: warning: overriding commands for target `.c.o' ../../Make.inc:90: warning: ignoring old commands for target `.c.o' cc -c -O2 factorMT.c -o spoolesMT_factorMT.o -I/usr/include/mpi cc -c -O2 mvm.c -o spoolesMT_mvm.o -I/usr/include/mpi cc -c -O2 QRfactorMT.c -o spoolesMT_QRfactorMT.o -I/usr/include/mpi cc -c -O2 QRsolveMT.c -o spoolesMT_QRsolveMT.o -I/usr/include/mpi cc -c -O2 solveMT.c -o spoolesMT_solveMT.o -I/usr/include/mpi cc -c -O2 factorMT.c -fPIC -DPIC -o spoolesMT_factorMT.lo -I/usr/include/mpi cc -c -O2 mvm.c -fPIC -DPIC -o spoolesMT_mvm.lo -I/usr/include/mpi cc -c -O2 QRfactorMT.c -fPIC -DPIC -o spoolesMT_QRfactorMT.lo -I/usr/include/mpi cc -c -O2 QRsolveMT.c -fPIC -DPIC -o spoolesMT_QRsolveMT.lo -I/usr/include/mpi cc -c -O2 solveMT.c -fPIC -DPIC -o spoolesMT_solveMT.lo -I/usr/include/mpi ar rv ../../libspooles.a spoolesMT_*.o a - spoolesMT_factorMT.o a - spoolesMT_mvm.o a - spoolesMT_QRfactorMT.o a - spoolesMT_QRsolveMT.o a - spoolesMT_solveMT.o rm -f spoolesMT_*.o echo ../../libspooles.a ../../libspooles.a make[4]: Leaving directory `/home/hazelsct/spooles-2.2/MT/src' rm -f makeG make[3]: Leaving directory `/home/hazelsct/spooles-2.2/MT/src' make[2]: Leaving directory `/home/hazelsct/spooles-2.2/MT' gcc -shared */*/*.lo -Wl,-soname,libspooles.so.2.2 -o libspooles.so.2.2 -lmpi -lpthread -lm ln -s libspooles.so.2.2 libspooles.so make[1]: Leaving directory `/home/hazelsct/spooles-2.2' touch build-stamp fakeroot debian/rules binary for texdocdir in AllInOne FrontTrees ReferenceManual; do \ (cd documentation/$texdocdir; \ latex main; \ latex main; \ latex main; \ dvips main -o $texdocdir.ps); \ done This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) [1] (./main.toc) (./intro.tex [2] [3] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [4]) (./LU_serial.tex [5] [6] [7] [8] [9] Overfull \hbox (2.16098pt too wide) in paragraph at lines 358--363 \OT1/cmr/m/n/10 The nu-meric fac-tor-iza-tion step be-gins by ini-tial-iz-ing t he \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject with the \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 symbacIVL [10] [11]) (./LU_MT.tex [12] [13] [14] Overfull \hbox (0.49548pt too wide) in paragraph at lines 186--188 \OT1/cmr/m/n/10 This ob-ject also uses a do-main de-com-po-si-tion map, the onl y solve map that presently found in the \OT1/cmr/bx/n/10 SPOOLES ) (./LU_MPI.tex [15] [16] Overfull \hbox (7.99084pt too wide) in paragraph at lines 149--149 []\OT1/cmtt/m/n/10 IVgather(neqns, IV_entries(vtxmapIV), IV_entries(ownersIV), ETree_vtxToFront(frontETree)) ;[] [17] [18] Overfull \hbox (0.49548pt too wide) in paragraph at lines 248--250 \OT1/cmr/m/n/10 This ob-ject also uses a do-main de-com-po-si-tion map, the onl y solve map that presently found in the \OT1/cmr/bx/n/10 SPOOLES Overfull \hbox (2.74089pt too wide) in paragraph at lines 256--256 []\OT1/cmtt/m/n/10 FrontMtx_MPI_split(frontmtx, solvemap, stats, msglvl, msgFil e, firsttag, MPI_COMM_WORLD) ;[] [19]) (./QR_serial.tex [20] [21] Overfull \hbox (2.16098pt too wide) in paragraph at lines 115--120 \OT1/cmr/m/n/10 The nu-meric fac-tor-iza-tion step be-gins by ini-tial-iz-ing t he \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject with the \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 symbacIVL [22] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 0 1 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 0 3 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 2 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 3 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 5 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 2 0 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 2 2 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 0 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 2 4.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 4 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 4 3 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 1 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 4 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 5 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 6 0 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 6 3 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 7 1 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 7 4 3.0[] ) (./LU_serial_driver.tex [23] [24] Underfull \vbox (badness 10000) has occurred while \output is active [25] Underfull \vbox (badness 10000) has occurred while \output is active [26] Underfull \vbox (badness 10000) has occurred while \output is active [27] Underfull \vbox (badness 10000) has occurred while \output is active [28] Underfull \vbox (badness 10000) has occurred while \output is active [29]) (./LU_MT_driver.tex [30] [31] Underfull \vbox (badness 10000) has occurred while \output is active [32] Underfull \vbox (badness 10000) has occurred while \output is active [33] Underfull \vbox (badness 10000) has occurred while \output is active [34] Underfull \vbox (badness 10000) has occurred while \output is active [35] Underfull \vbox (badness 10000) has occurred while \output is active [36] Underfull \vbox (badness 10000) has occurred while \output is active [37]) (./LU_MPI_driver.tex [38] [39] Underfull \vbox (badness 10000) has occurred while \output is active [40] Underfull \vbox (badness 10000) has occurred while \output is active [41] Underfull \vbox (badness 10000) has occurred while \output is active [42] Underfull \vbox (badness 10000) has occurred while \output is active [43] Underfull \vbox (badness 10000) has occurred while \output is active [44] Underfull \vbox (badness 10000) has occurred while \output is active [45] Underfull \vbox (badness 10000) has occurred while \output is active [46] Underfull \vbox (badness 10000) has occurred while \output is active [47]) (./QR_serial_driver.tex [48] [49] Underfull \vbox (badness 10000) has occurred while \output is active [50] Underfull \vbox (badness 10000) has occurred while \output is active [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] Underfull \vbox (badness 10000) has occurred while \output is active [53]) [54] (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (54 pages, 148412 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) [1] (./main.toc) (./intro.tex [2] [3] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [4]) (./LU_serial.tex [5] [6] [7] [8] [9] Overfull \hbox (2.16098pt too wide) in paragraph at lines 358--363 \OT1/cmr/m/n/10 The nu-meric fac-tor-iza-tion step be-gins by ini-tial-iz-ing t he \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject with the \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 symbacIVL [10] [11]) (./LU_MT.tex [12] [13] [14] Overfull \hbox (0.49548pt too wide) in paragraph at lines 186--188 \OT1/cmr/m/n/10 This ob-ject also uses a do-main de-com-po-si-tion map, the onl y solve map that presently found in the \OT1/cmr/bx/n/10 SPOOLES ) (./LU_MPI.tex [15] [16] Overfull \hbox (7.99084pt too wide) in paragraph at lines 149--149 []\OT1/cmtt/m/n/10 IVgather(neqns, IV_entries(vtxmapIV), IV_entries(ownersIV), ETree_vtxToFront(frontETree)) ;[] [17] [18] Overfull \hbox (0.49548pt too wide) in paragraph at lines 248--250 \OT1/cmr/m/n/10 This ob-ject also uses a do-main de-com-po-si-tion map, the onl y solve map that presently found in the \OT1/cmr/bx/n/10 SPOOLES Overfull \hbox (2.74089pt too wide) in paragraph at lines 256--256 []\OT1/cmtt/m/n/10 FrontMtx_MPI_split(frontmtx, solvemap, stats, msglvl, msgFil e, firsttag, MPI_COMM_WORLD) ;[] [19]) (./QR_serial.tex [20] [21] Overfull \hbox (2.16098pt too wide) in paragraph at lines 115--120 \OT1/cmr/m/n/10 The nu-meric fac-tor-iza-tion step be-gins by ini-tial-iz-ing t he \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject with the \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 symbacIVL [22] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 0 1 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 0 3 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 2 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 3 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 5 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 2 0 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 2 2 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 0 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 2 4.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 4 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 4 3 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 1 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 4 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 5 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 6 0 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 6 3 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 7 1 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 7 4 3.0[] ) (./LU_serial_driver.tex [23] [24] Underfull \vbox (badness 10000) has occurred while \output is active [25] Underfull \vbox (badness 10000) has occurred while \output is active [26] Underfull \vbox (badness 10000) has occurred while \output is active [27] Underfull \vbox (badness 10000) has occurred while \output is active [28] Underfull \vbox (badness 10000) has occurred while \output is active [29]) (./LU_MT_driver.tex [30] [31] Underfull \vbox (badness 10000) has occurred while \output is active [32] Underfull \vbox (badness 10000) has occurred while \output is active [33] Underfull \vbox (badness 10000) has occurred while \output is active [34] Underfull \vbox (badness 10000) has occurred while \output is active [35] Underfull \vbox (badness 10000) has occurred while \output is active [36] Underfull \vbox (badness 10000) has occurred while \output is active [37]) (./LU_MPI_driver.tex [38] [39] Underfull \vbox (badness 10000) has occurred while \output is active [40] Underfull \vbox (badness 10000) has occurred while \output is active [41] Underfull \vbox (badness 10000) has occurred while \output is active [42] Underfull \vbox (badness 10000) has occurred while \output is active [43] Underfull \vbox (badness 10000) has occurred while \output is active [44] Underfull \vbox (badness 10000) has occurred while \output is active [45] Underfull \vbox (badness 10000) has occurred while \output is active [46] Underfull \vbox (badness 10000) has occurred while \output is active [47]) (./QR_serial_driver.tex [48] [49] Underfull \vbox (badness 10000) has occurred while \output is active [50] Underfull \vbox (badness 10000) has occurred while \output is active [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] Underfull \vbox (badness 10000) has occurred while \output is active [53]) [54] (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (54 pages, 148412 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) [1] (./main.toc) (./intro.tex [2] [3] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [4]) (./LU_serial.tex [5] [6] [7] [8] [9] Overfull \hbox (2.16098pt too wide) in paragraph at lines 358--363 \OT1/cmr/m/n/10 The nu-meric fac-tor-iza-tion step be-gins by ini-tial-iz-ing t he \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject with the \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 symbacIVL [10] [11]) (./LU_MT.tex [12] [13] [14] Overfull \hbox (0.49548pt too wide) in paragraph at lines 186--188 \OT1/cmr/m/n/10 This ob-ject also uses a do-main de-com-po-si-tion map, the onl y solve map that presently found in the \OT1/cmr/bx/n/10 SPOOLES ) (./LU_MPI.tex [15] [16] Overfull \hbox (7.99084pt too wide) in paragraph at lines 149--149 []\OT1/cmtt/m/n/10 IVgather(neqns, IV_entries(vtxmapIV), IV_entries(ownersIV), ETree_vtxToFront(frontETree)) ;[] [17] [18] Overfull \hbox (0.49548pt too wide) in paragraph at lines 248--250 \OT1/cmr/m/n/10 This ob-ject also uses a do-main de-com-po-si-tion map, the onl y solve map that presently found in the \OT1/cmr/bx/n/10 SPOOLES Overfull \hbox (2.74089pt too wide) in paragraph at lines 256--256 []\OT1/cmtt/m/n/10 FrontMtx_MPI_split(frontmtx, solvemap, stats, msglvl, msgFil e, firsttag, MPI_COMM_WORLD) ;[] [19]) (./QR_serial.tex [20] [21] Overfull \hbox (2.16098pt too wide) in paragraph at lines 115--120 \OT1/cmr/m/n/10 The nu-meric fac-tor-iza-tion step be-gins by ini-tial-iz-ing t he \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject with the \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 symbacIVL [22] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 0 1 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 0 3 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 2 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 3 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 1 5 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 2 0 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 2 2 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 0 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 2 4.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 3 4 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 4 3 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 1 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 4 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 5 5 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 6 0 2.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 6 3 3.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 7 1 1.0[] Overfull \hbox (0.61469pt too wide) in paragraph at lines 226--226 []\OT1/cmtt/m/n/10 7 4 3.0[] ) (./LU_serial_driver.tex [23] [24] Underfull \vbox (badness 10000) has occurred while \output is active [25] Underfull \vbox (badness 10000) has occurred while \output is active [26] Underfull \vbox (badness 10000) has occurred while \output is active [27] Underfull \vbox (badness 10000) has occurred while \output is active [28] Underfull \vbox (badness 10000) has occurred while \output is active [29]) (./LU_MT_driver.tex [30] [31] Underfull \vbox (badness 10000) has occurred while \output is active [32] Underfull \vbox (badness 10000) has occurred while \output is active [33] Underfull \vbox (badness 10000) has occurred while \output is active [34] Underfull \vbox (badness 10000) has occurred while \output is active [35] Underfull \vbox (badness 10000) has occurred while \output is active [36] Underfull \vbox (badness 10000) has occurred while \output is active [37]) (./LU_MPI_driver.tex [38] [39] Underfull \vbox (badness 10000) has occurred while \output is active [40] Underfull \vbox (badness 10000) has occurred while \output is active [41] Underfull \vbox (badness 10000) has occurred while \output is active [42] Underfull \vbox (badness 10000) has occurred while \output is active [43] Underfull \vbox (badness 10000) has occurred while \output is active [44] Underfull \vbox (badness 10000) has occurred while \output is active [45] Underfull \vbox (badness 10000) has occurred while \output is active [46] Underfull \vbox (badness 10000) has occurred while \output is active [47]) (./QR_serial_driver.tex [48] [49] Underfull \vbox (badness 10000) has occurred while \output is active [50] Underfull \vbox (badness 10000) has occurred while \output is active [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] Underfull \vbox (badness 10000) has occurred while \output is active [53]) [54] (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (54 pages, 148412 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> AllInOne.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex) (./ordering.tex Underfull \vbox (badness 1132) has occurred while \output is active [1] (./fig3x4grid.tex Overfull \hbox (41.53922pt too wide) in paragraph at lines 46--47 [][] Overfull \hbox (10.1674pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 1 chunks, 70 active entries, 1024 allocated, 6.84 % used[] ) [2] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [3] [4] [5]) (./fronttrees.tex psfig: searching R2D100.eps for bounding box psfig: including R2D100.eps psfig: searching R2D100perm.eps for bounding box psfig: including R2D100perm.eps [6] psfig: searching vtree.eps for bounding box psfig: including vtree.eps [7] [8] psfig: searching fsvtree.eps for bounding box psfig: including fsvtree.eps psfig: searching fstree.eps for bounding box psfig: including fstree.eps psfig: searching fsmtx.eps for bounding box psfig: including fsmtx.eps psfig: searching amvtree.eps for bounding box psfig: including amvtree.eps psfig: searching amtree.eps for bounding box psfig: including amtree.eps psfig: searching ammtx.eps for bounding box psfig: including ammtx.eps [9] [10] [11] [12] [13] psfig: searching spvtree.eps for bounding box psfig: including spvtree.eps psfig: searching sptree.eps for bounding box psfig: including sptree.eps psfig: searching spmtx.eps for bounding box psfig: including spmtx.eps [14] [15] [16] [17]) (./main.bbl [18] [19]) (./main.ind) [20] (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (20 pages, 60128 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex) (./ordering.tex Underfull \vbox (badness 1132) has occurred while \output is active [1] (./fig3x4grid.tex Overfull \hbox (41.53922pt too wide) in paragraph at lines 46--47 [][] Overfull \hbox (10.1674pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 1 chunks, 70 active entries, 1024 allocated, 6.84 % used[] ) [2] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [3] [4] [5]) (./fronttrees.tex psfig: searching R2D100.eps for bounding box psfig: including R2D100.eps psfig: searching R2D100perm.eps for bounding box psfig: including R2D100perm.eps [6] psfig: searching vtree.eps for bounding box psfig: including vtree.eps [7] [8] psfig: searching fsvtree.eps for bounding box psfig: including fsvtree.eps psfig: searching fstree.eps for bounding box psfig: including fstree.eps psfig: searching fsmtx.eps for bounding box psfig: including fsmtx.eps psfig: searching amvtree.eps for bounding box psfig: including amvtree.eps psfig: searching amtree.eps for bounding box psfig: including amtree.eps psfig: searching ammtx.eps for bounding box psfig: including ammtx.eps [9] [10] [11] [12] [13] psfig: searching spvtree.eps for bounding box psfig: including spvtree.eps psfig: searching sptree.eps for bounding box psfig: including sptree.eps psfig: searching spmtx.eps for bounding box psfig: including spmtx.eps [14] [15] [16] [17]) (./main.bbl [18] [19]) (./main.ind) [20] (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (20 pages, 60128 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex) (./ordering.tex Underfull \vbox (badness 1132) has occurred while \output is active [1] (./fig3x4grid.tex Overfull \hbox (41.53922pt too wide) in paragraph at lines 46--47 [][] Overfull \hbox (10.1674pt too wide) in paragraph at lines 67--67 [] \OT1/cmtt/m/n/10 1 chunks, 70 active entries, 1024 allocated, 6.84 % used[] ) [2] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [3] [4] [5]) (./fronttrees.tex psfig: searching R2D100.eps for bounding box psfig: including R2D100.eps psfig: searching R2D100perm.eps for bounding box psfig: including R2D100perm.eps [6] psfig: searching vtree.eps for bounding box psfig: including vtree.eps [7] [8] psfig: searching fsvtree.eps for bounding box psfig: including fsvtree.eps psfig: searching fstree.eps for bounding box psfig: including fstree.eps psfig: searching fsmtx.eps for bounding box psfig: including fsmtx.eps psfig: searching amvtree.eps for bounding box psfig: including amvtree.eps psfig: searching amtree.eps for bounding box psfig: including amtree.eps psfig: searching ammtx.eps for bounding box psfig: including ammtx.eps [9] [10] [11] [12] [13] psfig: searching spvtree.eps for bounding box psfig: including spvtree.eps psfig: searching sptree.eps for bounding box psfig: including sptree.eps psfig: searching spmtx.eps for bounding box psfig: including spmtx.eps [14] [15] [16] [17]) (./main.bbl [18] [19]) (./main.ind) [20] (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (20 pages, 60128 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> FrontTrees.ps . [1] [2] [3] [4] [5] [6] [7<./R2D100.eps><./R2D100perm.eps>] [8<./vtree.eps>] [9] [10 <./fsvtree.eps><./fstree.eps>] [11<./fsmtx.eps>] [12<./amvtree.eps> <./amtree.eps>] [13<./ammtx.eps>] [14] [15<./spvtree.eps><./sptree.eps>] [16 <./spmtx.eps>] [17] [18] [19] [20] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, [1] [1] (./main.toc [2] Underfull \hbox (badness 10000) in paragraph at lines 36--36 [] []\OT1/cmtt/m/n/10 Drand\OT1/cmr/bx/n/10 : [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 145--145 [] []\OT1/cmtt/m/n/10 DSTree\OT1/cmr/bx/n/10 : [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 202--202 [] []\OT1/cmtt/m/n/10 MSMD\OT1/cmr/bx/n/10 : [7] [8] [9] [10] [11] [12]) [13] (./main.lof) (./partIntro.tex [14] [15] Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) Underfull \vbox (badness 10000) has occurred while \output is active [16] [17] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 238. [18] [19] [20]) (./partUtil.tex [21] [22] (../../A2/doc/intro.tex Chapter 2. ) (../../A2/doc/dataStructure.tex Overfull \hbox (22.05931pt too wide) in paragraph at lines 44--54 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 A2[]copyEntriesToVector() \OT1/cmr/m/n/10 method uses the fol-low-ing con-stants: \OT1/cmtt/m/n/10 A2[]STRICT[]LOWER\OT1/ cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]LOWER\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]D IAGONAL\OT1/cmr/m/n/10 , ) (../../A2/doc/proto.tex [23] [24] [25] Overfull \hbox (9.5478pt too wide) in paragraph at lines 290--295 \OT1/cmr/m/n/10 Note, \OT1/cmtt/m/n/10 firstrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/ 10 lastrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 firstcol \OT1/cmr/m/n/10 and \OT1/ cmtt/m/n/10 lastcol \OT1/cmr/m/n/10 must sat-isfy \OT1/cmtt/m/n/10 0 <= firstro w <= lastrow < mtxB->n1 [26] [27] [28] [29] Overfull \hbox (0.273pt too wide) in paragraph at lines 776--779 []\OT1/cmr/m/n/10 This method fills the ma-trix with ran-dom num-bers taken fro m a uni-form dis-tri-bu-tion on \OT1/cmtt/m/n/10 [lower,upper] [30] [31]) (../../A2/doc/drivers.tex [32]) (../../Coords/doc/intro.tex [33] Chapter 3. ) (../../Coords/doc/dataStructure.tex) (../../Coords/doc/proto.tex [34] [35] [36] Overfull \hbox (16.26517pt too wide) in paragraph at lines 330--336 []\OT1/cmr/m/n/10 This method write the \OT1/cmtt/m/n/10 Coords \OT1/cmr/m/n/10 ob-ject to a file in an easy to read fash-ion. The method \OT1/cmtt/m/n/10 Coo rds[]writeStats() ) (../../Coords/doc/drivers.tex [37]) (../../DV/doc/intro.tex [38] Chapter 4. ) (../../DV/doc/dataStructure.tex) (../../DV/doc/proto.tex Overfull \hbox (5.16449pt too wide) in paragraph at lines 23--1 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 max size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nowned \OT1/cmr/m/n/10 and \OT1/cmtt/m/n /10 vec \OT1/cmr/m/n/10 fields need never be ac-cessed di-rectly --- see the \O T1/cmtt/m/n/10 DV[]size()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 DV[]maxsize()\OT1/c mr/m/n/10 , [39] [40] (/usr/share/texmf-texlive/tex/latex/base/omlcmr.fd) [41] [42] [43]) (../../DV/doc/drivers.tex [44]) (../../Drand/doc/intro.tex [45] Chapter 5. ) (../../Drand/doc/dataStructure.tex) (../../Drand/doc/proto.tex [46] [47]) (../../Drand/doc/drivers.tex [48]) (../../I2Ohash/doc/intro.tex [49] Chapter 6. ) (../../I2Ohash/doc/dataStructure.tex) (../../I2Ohash/doc/proto.tex [50] Overfull \hbox (17.40442pt too wide) in paragraph at lines 80--86 []\OT1/cmr/m/n/10 This method is the ba-sic ini-tial-izer method. It clears any pre-vi-ous data with a call to \OT1/cmtt/m/n/10 I2Ohash[]clearData()\OT1/cmr/m /n/10 . [51]) (../../I2Ohash/doc/drivers.tex [52]) (../../IIheap/doc/intro.tex [53] Chapter 7. ) (../../IIheap/doc/dataStructure.tex) (../../IIheap/doc/proto.tex [54] Overfull \hbox (80.88438pt too wide) in paragraph at lines 44--49 \OT1/cmtt/m/n/10 heap->keys \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 heap->values \ OT1/cmr/m/n/10 vec-tors, then sets the struc-ture's de-fault fields with a call to \OT1/cmtt/m/n/10 IIheap[]setDefaultFields()\OT1/cmr/m/n/10 . Overfull \hbox (12.15446pt too wide) in paragraph at lines 80--87 []\OT1/cmr/m/n/10 This method is the ba-sic ini-tial-izer method. It clears any pre-vi-ous data with a call to \OT1/cmtt/m/n/10 IIheap[]clearData()\OT1/cmr/m/ n/10 , ) (../../IV/doc/intro.tex [55] Chapter 8. ) (../../IV/doc/dataStructure.tex [56]) (../../IV/doc/proto.tex [57] [58] [59] [60] [61] [62]) (../../IV/doc/drivers.tex) (../../IVL/doc/intro.tex [63] Chapter 9. ) (../../IVL/doc/dataStructure.tex [64]) (../../IVL/doc/proto.tex [65] Overfull \hbox (1.08043pt too wide) in paragraph at lines 166--171 []\OT1/cmr/m/n/10 This method is used when the num-ber of lists and their to-ta l size is known --- \OT1/cmtt/m/n/10 type \OT1/cmr/m/n/10 must be \OT1/cmtt/m/n /10 IVL[]CHUNKED\OT1/cmr/m/n/10 . Overfull \hbox (1.49115pt too wide) in paragraph at lines 199--199 []\OT1/cmtt/m/n/10 int IVL_initFromSubIVL ( IVL *subIVL, IVL *ivl, IV *keeplis tIV, IV *keepentriesIV ) ;[] [66] [67] [68] [69] [70]) (../../IVL/doc/drivers.tex) (../../Ideq/doc/intro.tex [71] Chapter 10. ) (../../Ideq/doc/dataStructure.tex) (../../Ideq/doc/proto.tex [72] [73]) (../../Lock/doc/intro.tex [74] Chapter 11. ) (../../Lock/doc/dataStructure.tex) (../../Lock/doc/proto.tex [75] Overfull \hbox (18.04205pt too wide) in paragraph at lines 40--47 []\OT1/cmr/m/n/10 This method clears the data for the ob-ject. If \OT1/cmtt/m/n /10 lock->mutex \OT1/cmr/m/n/10 is not \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , t hen \OT1/cmtt/m/n/10 mutex[]destroy(lock->mutex) ) (../../Perm/doc/intro.tex [76] Chapter 12. ) (../../Perm/doc/dataStructure.tex) (../../Perm/doc/proto.tex [77] [78] [79] Overfull \hbox (17.45987pt too wide) in paragraph at lines 317--323 []\OT1/cmr/m/n/10 This method writes out a \OT1/cmtt/m/n/10 Perm \OT1/cmr/m/n/1 0 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Perm[]writeStats() ) (../../Utilities/doc/intro.tex [80] Chapter 13. ) (../../Utilities/doc/dataStructure.tex) (../../Utilities/doc/proto.tex (../../Utilities/doc/CV.tex [81]) (../../Utilities/doc/DV.tex [82] [83] [84] [85] [86] [87]) (../../Utilities/doc/ZV.tex Overfull \hbox (23.13327pt too wide) in paragraph at lines 51--57 []\OT1/cmr/m/n/10 This method fills \OT1/cmtt/m/n/10 *pbreal \OT1/cmr/m/n/10 an d \OT1/cmtt/m/n/10 *pbimag \OT1/cmr/m/n/10 with the real and imag-i-nary parts of the re-cip-ro-cal of \OT1/cmtt/m/n/10 (areal,aimag)\OT1/cmr/m/n/10 . [88] [89] [90] [91] [92] [93]) (../../Utilities/doc/IV.tex [94] [95]) (../../Utilities/doc/FV.tex [96] [97]) (../../Utilities/doc/PCV.tex [98]) (../../Utilities/doc/PDV.tex) (../../Utilities/doc/PIV.tex) (../../Utilities/doc/PFV.tex [99]) (../../Utilities/doc/sort.tex [100] [101] [102]) (../../Utilities/doc/IP.tex [103]) (../../Utilities/doc/I2OP.tex Overfull \hbox (4.87234pt too wide) in paragraph at lines 57--62 []\OT1/cmr/m/n/10 This is an ini-tial-izer method for a vec-tor of \OT1/cmtt/m/ n/10 I2OP \OT1/cmr/m/n/10 struc-tures. We set \OT1/cmtt/m/n/10 base[i].value0 = base[i].value1 )) (../../Utilities/doc/drivers.tex [104]) (../../ZV/doc/intro.tex [105] Chapter 14. ) (../../ZV/doc/dataStructure.tex) (../../ZV/doc/proto.tex Overfull \hbox (5.16449pt too wide) in paragraph at lines 23--1 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 max size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nowned \OT1/cmr/m/n/10 and \OT1/cmtt/m/n /10 vec \OT1/cmr/m/n/10 fields need never be ac-cessed di-rectly --- see the \O T1/cmtt/m/n/10 ZV[]size()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 ZV[]maxsize()\OT1/c mr/m/n/10 , [106] [107] [108] [109] [110]) (../../ZV/doc/drivers.tex [111])) (./partOrder.tex [112] [113] (../../BKL/doc/intro.tex Chapter 15. ) (../../BKL/doc/dataStructure.tex [114]) (../../BKL/doc/proto.tex [115] [116] [117]) (../../BPG/doc/intro.tex [118] Chapter 16. [119] [120]) (../../BPG/doc/dataStructure.tex) (../../BPG/doc/proto.tex [121] [122] Overfull \hbox (66.05252pt too wide) in paragraph at lines 260--262 []\OT1/cmr/m/n/10 This method has the same func-tion-al-ity, call-ing se-quence and re-turned val-ues as the pre-ced-ing \OT1/cmtt/m/n/10 BPG[]DMdecomposition () [123]) (../../BPG/doc/drivers.tex [124]) (../../DSTree/doc/intro.tex [125] Chapter 17. ) (../../DSTree/doc/dataStructure.tex) (../../DSTree/doc/proto.tex [126] [127] [128] [129] Overfull \hbox (21.79298pt too wide) in paragraph at lines 428--437 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 DSTree \OT1/cmr/m/n/10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 DS Tree[]writeStats() ) (../../DSTree/doc/drivers.tex [130]) (../../EGraph/doc/intro.tex [131] Chapter 18. ) (../../EGraph/doc/dataStructure.tex) (../../EGraph/doc/proto.tex [132] [133] Overfull \hbox (27.34856pt too wide) in paragraph at lines 264--274 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 EGraph \OT1/cmr/m/n/10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 E Graph[]writeStats() Overfull \hbox (59.98613pt too wide) in paragraph at lines 264--274 \OT1/cmr/m/n/10 is called to write out the header and statis-tics. Then the \OT 1/cmtt/m/n/10 adjIVL \OT1/cmr/m/n/10 ob-ject is writ-ten out us-ing \OT1/cmtt/m /n/10 IVL[]writeForHumanEye()\OT1/cmr/m/n/10 . [134]) (../../EGraph/doc/drivers.tex [135]) (../../ETree/doc/intro.tex [136] Chapter 19. ) (../../ETree/doc/dataStructure.tex) (../../ETree/doc/proto.tex [137] Overfull \hbox (10.32721pt too wide) in paragraph at lines 32--35 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields are set to de-fault val-ues: \OT1/cmtt/m/n/10 nfront = nvtx = 0\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 t ree = nodwghtsIV [138] [139] [140] Overfull \hbox (6.7411pt too wide) in paragraph at lines 354--354 []\OT1/cmtt/m/n/10 int ETree_initFromSubtree ( ETree *subtree, IV *nodeidsIV, ETree *etree, IV *vtxIV ) ;[] Overfull \hbox (9.87708pt too wide) in paragraph at lines 468--475 \OT1/cmr/m/n/10 (1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 2)$ blocks dur-ing a fac-t or-iza-tion. The \OT1/cmtt/m/n/10 type \OT1/cmr/m/n/10 pa-ram-e-ter can be one of \OT1/cmtt/m/n/10 SPOOLES[]REAL \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[] COMPLEX\OT1/cmr/m/n/10 . [141] Overfull \hbox (22.49097pt too wide) in paragraph at lines 565--565 []\OT1/cmtt/m/n/10 ETree * ETree_spliceTwoEtrees ( ETree *etree0, Graph *graph , IV *mapIV, ETree *etree1 ) ;[] [142] [143] [144] [145] [146] Overfull \hbox (14.4601pt too wide) in paragraph at lines 1095--1102 \OT1/cmr/m/n/10 us-ing \OT1/cmtt/m/n/10 ETree[]mergeFrontsOne() \OT1/cmr/m/n/10 fol-lowed by \OT1/cmtt/m/n/10 ETree[]mergeFrontsAll()\OT1/cmr/m/n/10 . See the driver pro-grams \OT1/cmtt/m/n/10 testTransform [147] [148] [149] [150] Overfull \hbox (30.76532pt too wide) in paragraph at lines 1493--1501 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 ETree \OT1/cmr/m/n/10 ob-ject to a file in a read-able for-mat. Oth-er-wise, the method \OT1/cmtt/m/n /10 ETree[]writeStats() ) (../../ETree/doc/drivers.tex [151] [152] [153] Overfull \hbox (31.12537pt too wide) in paragraph at lines 320--328 \OT1/cmtt/m/n/10 outETreeFile \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 none \OT1/cmr /m/n/10 then the \OT1/cmtt/m/n/10 ETree \OT1/cmr/m/n/10 ob-ject is not writ-ten to a file. Oth-er-wise, the \OT1/cmtt/m/n/10 ETree[]writeToFile() [154] psfig: searching ../../ETree/doc/FS1.eps for bounding box psfig: including ../../ETree/doc/FS1.eps psfig: searching ../../ETree/doc/FS2.eps for bounding box psfig: including ../../ETree/doc/FS2.eps [155] [156] [157] psfig: searching ../../ETree/doc/GRD7x7x7_nzA.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzA.eps psfig: searching ../../ETree/doc/GRD7x7x7_nzF.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzF.eps psfig: searching ../../ETree/doc/GRD7x7x7_forwops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_forwops.eps psfig: searching ../../ETree/doc/GRD7x7x7_backops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_backops.eps psfig: searching ../../ETree/doc/workingStorage.eps for bounding box psfig: including ../../ETree/doc/workingStorage.eps [158] [159]) (../../GPart/doc/intro.tex [160] [161] Chapter 20. ) (../../GPart/doc/dataStructure.tex [162] [163]) (../../GPart/doc/proto.tex [164] [165] [166] [167] [168] [169]) (../../GPart/doc/drivers.tex [170] [171] [172]) (../../Graph/doc/intro.tex [173] Chapter 21. [174]) (../../Graph/doc/dataStructure.tex) (../../Graph/doc/proto.tex [175] [176] [177] [178] [179] Overfull \hbox (11.29308pt too wide) in paragraph at lines 531--536 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 Graph \OT1/cmr/m/n/10 o b-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Gra ph[]writeStats() ) (../../Graph/doc/drivers.tex [180] [181] Overfull \hbox (27.02443pt too wide) in paragraph at lines 200--204 []\OT1/cmr/m/n/10 This driver pro-gram reads in a \OT1/cmtt/m/n/10 Graph \OT1/c mr/m/n/10 ob-ject and tests whether it is sym-met-ric us-ing the \OT1/cmtt/m/n/ 10 Graph[]isSymmetric() psfig: searching ../../Graph/doc/rad1.eps for bounding box psfig: including ../../Graph/doc/rad1.eps psfig: searching ../../Graph/doc/rad2.eps for bounding box psfig: including ../../Graph/doc/rad2.eps [182]) (../../MSMD/doc/intro.tex [183] Chapter 22. [184]) (../../MSMD/doc/dataStructure.tex [185] [186] [187]) (../../MSMD/doc/proto.tex [188] [189] [190] Overfull \hbox (39.69234pt too wide) in paragraph at lines 336--339 []\OT1/cmr/m/n/10 This method cleans the nodes in the reach set by call-ing \OT 1/cmtt/m/n/10 MSMD[]cleanSubtreeList() \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 MSM D[]clearEdgeList()\OT1/cmr/m/n/10 . [191]) (../../MSMD/doc/drivers.tex [192] Overfull \hbox (2.44388pt too wide) in paragraph at lines 72--75 []\OT1/cmtt/m/n/10 stepType == 0 \OT1/cmr/m/n/10 --- one ver-tex elim-i-nated a t each step, like YSMP, and QMD from SPARSPAK. [193]) (../../Network/doc/intro.tex [194] Chapter 23. [195]) (../../Network/doc/dataStructure.tex [196]) (../../Network/doc/proto.tex [197] [198] Overfull \hbox (10.01547pt too wide) in paragraph at lines 232--238 []\OT1/cmr/m/n/10 This method writes the net-work to a file in a hu-man read-ab le for-mat. The method \OT1/cmtt/m/n/10 Network[]writeStats() ) (../../SolveMap/doc/intro.tex [199] Chapter 24. ) (../../SolveMap/doc/dataStructure.tex) (../../SolveMap/doc/proto.tex [200] [201] Overfull \hbox (1.13116pt too wide) in paragraph at lines 223--230 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 solvemap \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or \OT1/cmtt/m/n/10 s ymmetryflag \OT1/cmr/m/n/10 is in-valid, or \OT1/cmtt/m/n/10 nfront\OT1/cmr/m/n /10 , \OT1/cmtt/m/n/10 nblockUpper\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nblockLowe r [202] [203] Overfull \hbox (43.46613pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 mapidsUpper[*]\OT1/cmr/m/n/10 , and if \OT 1/cmtt/m/n/10 symmetryflag = SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10 , fol-lowed b y \OT1/cmtt/m/n/10 rowidsLower[*]\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 colidsLower [*] [204] Overfull \hbox (48.40392pt too wide) in paragraph at lines 508--513 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 SolveMap \OT1/cmr/m/n/ 10 ob-ject to a file in an eas-ily read-able for-mat. The method \OT1/cmtt/m/n/ 10 SolveMap[]writeStats() ) (../../Tree/doc/intro.tex [205] Chapter 25. ) (../../Tree/doc/dataStructure.tex) (../../Tree/doc/proto.tex [206] [207] [208] [209] [210] [211] [212] Overfull \hbox (0.79317pt too wide) in paragraph at lines 830--837 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 Perm \OT1/cmr/m/n/10 ob -ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Tree []writeStats() [213]) (../../Tree/doc/drivers.tex psfig: searching ../../Tree/doc/R2D100HC.eps for bounding box psfig: including ../../Tree/doc/R2D100HC.eps psfig: searching ../../Tree/doc/R2D100DC.eps for bounding box psfig: including ../../Tree/doc/R2D100DC.eps psfig: searching ../../Tree/doc/R2D100HP.eps for bounding box psfig: including ../../Tree/doc/R2D100HP.eps psfig: searching ../../Tree/doc/R2D100DP.eps for bounding box psfig: including ../../Tree/doc/R2D100DP.eps )) (./partNumeric.tex [214] [215] [216] (../../Chv/doc/intro.tex Chapter 26. psfig: searching ../../Chv/doc/simple.eps for bounding box psfig: including ../../Chv/doc/simple.eps [217] psfig: searching ../../Chv/doc/simple2.eps for bounding box psfig: including ../../Chv/doc/simple2.eps ) (../../Chv/doc/dataStructure.tex [218]) (../../Chv/doc/proto.tex [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229]) (../../Chv/doc/drivers.tex [230] Overfull \hbox (28.32214pt too wide) in paragraph at lines 99--107 \OT1/cmr/m/n/10 been fac-tored to store the en-tries into dense $\OML/cmm/m/it/ 10 L$ \OT1/cmr/m/n/10 and $\OML/cmm/m/it/10 U$ \OT1/cmr/m/n/10 sub-ma-tri-ces. Use the script file \OT1/cmtt/m/n/10 do[]copyEntriesToVector [231] [232] [233] Overfull \hbox (47.11063pt too wide) in paragraph at lines 406--415 []\OT1/cmr/m/n/10 This driver pro-gram tests three meth-ods: \OT1/cmtt/m/n/10 C hv[]swapRowsAndColumns()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 Chv[]swapRows() \OT1 /cmr/m/n/10 and \OT1/cmtt/m/n/10 Chv[]swapColumns()\OT1/cmr/m/n/10 . [234]) (../../ChvList/doc/intro.tex [235] Chapter 27. ) (../../ChvList/doc/dataStructure.tex [236]) (../../ChvList/doc/proto.tex [237]) (../../ChvManager/doc/intro.tex [238] Chapter 28. ) (../../ChvManager/doc/dataStructure.tex [239]) (../../ChvManager/doc/proto.tex [240]) (../../DenseMtx/doc/intro.tex [241] Chapter 29. ) (../../DenseMtx/doc/dataStructure.tex) (../../DenseMtx/doc/proto.tex [242] [243] [244] [245] [246] [247] [248]) (../../FrontMtx/doc/intro.tex [249] Chapter 30. psfig: searching ../../FrontMtx/doc/simple.eps for bounding box psfig: including ../../FrontMtx/doc/simple.eps [250] [251]) (../../FrontMtx/doc/dataStructure.tex [252] [253]) (../../FrontMtx/doc/proto.tex [254] [255] [256] [257] Overfull \hbox (13.35185pt too wide) in paragraph at lines 368--376 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 frontmtx\ OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/1 0 symbfacIVL \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if \O T1/cmtt/m/n/10 type\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetryflag\OT1/cmr/m/n/ 10 , \OT1/cmtt/m/n/10 sparsityflag [258] Overfull \hbox (24.57285pt too wide) in paragraph at lines 503--508 \OT1/cmr/m/n/10 gre-gate fronts and help syn-chro-nize the fac-tor-iza-tion. Th ere is an anal-o-gous \OT1/cmtt/m/n/10 FrontMtx[]MPI[]aggregateList() [259] [260] [261] Overfull \hbox (1.49115pt too wide) in paragraph at lines 765--765 [] \OT1/cmtt/m/n/10 ChvManager *chvmanager, int msglvl, FILE *msgFile ) ;[] [262] [263] [264] [265] [266] Overfull \hbox (42.7928pt too wide) in paragraph at lines 1297--1302 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/1 0 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 FrontMtx[]writeStats() ) (../../FrontMtx/doc/drivers.tex [267]) (../../ILUMtx/doc/intro.tex [268] Chapter 31. ) (../../ILUMtx/doc/dataStructure.tex Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . [269]) (../../ILUMtx/doc/proto.tex Overfull \hbox (11.74596pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns = 0\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [270] [271]) (../../ILUMtx/doc/drivers.tex [272]) (../../InpMtx/doc/intro.tex [273] Chapter 32. [274]) (../../InpMtx/doc/dataStructure.tex [275] Overfull \hbox (10.7373pt too wide) in paragraph at lines 74--79 []\OT1/cmtt/m/n/10 int maxnvector \OT1/cmr/m/n/10 -- present max-i-mum num-ber of vec-tors. This quan-tity is ini-tial-ized by the \OT1/cmtt/m/n/10 InpMtx[]in it() [276]) (../../InpMtx/doc/proto.tex [277] [278] [279] Overfull \hbox (9.61465pt too wide) in paragraph at lines 390--400 []\OT1/cmr/m/n/10 This method changes the co-or-di-nate type. If $[] = []$, the pro-gram re-turns. If $[] \OMS/cmtt/m/n/10 ^^U [280] [281] [282] Overfull \hbox (34.11732pt too wide) in paragraph at lines 734--745 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (6.7411pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector ( InpMtx *A, DenseMtx *Y, doub le alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_T ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_H ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] [283] Overfull \hbox (34.11732pt too wide) in paragraph at lines 787--798 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [284] Overfull \hbox (11.27731pt too wide) in paragraph at lines 964--972 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , Overfull \hbox (11.27731pt too wide) in paragraph at lines 980--988 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , [285] [286] [287] Overfull \hbox (13.68219pt too wide) in paragraph at lines 1411--1418 []\OT1/cmr/m/n/10 This method writes the ob-ject to a file suit-able for read-i ng by a hu-man. The method \OT1/cmtt/m/n/10 InpMtx[]writeStats() [288] Overfull \hbox (10.59344pt too wide) in paragraph at lines 1465--1471 \OT1/cmtt/m/n/10 readHB[]mat[]double() \OT1/cmr/m/n/10 from the Harwell-Boeing C IO rou-tines from NIST[], found in the \OT1/cmtt/m/n/10 misc/src/iohb.c ) (../../InpMtx/doc/drivers.tex [289] [290] [291] [292] psfig: searching ../../InpMtx/doc/BCSSTK23.eps for bounding box psfig: including ../../InpMtx/doc/BCSSTK23.eps [293] [294] [295]) (../../Iter/doc/intro.tex [296] Chapter 33. Overfull \hbox (5.20291pt too wide) in paragraph at lines 4--15 \OT1/cmtt/m/n/10 Iter \OT1/cmr/m/n/10 is com-posed of 5 Krylov space it-er-a-ti ve meth-ods, PCG (Pre-con-di-tioned Con-ju-gate Gra-di-ents), BiCGStab, ) (../../Iter/doc/dataStructure.tex) (../../Iter/doc/proto.tex [297] [298] [299] [300] [301]) (../../Iter/doc/drivers.tex [302] [303] [304] [305]) (../../PatchAndGoInfo/doc/intro.tex [306] Chapter 34. ) (../../PatchAndGoInfo/doc/dataStructure.tex [307] Overfull \hbox (58.84337pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 2 \OT1/cmr/m/n/10 --- used with struc-tural anal-y-sis ma-tr i-ces, if $\OMS/cmtt/m/n/10 j\OML/cmm/m/it/10 A[]\OMS/cmtt/m/n/10 j ^^T []$ \OT 1/cmr/m/n/10 then set $\OML/cmm/m/it/10 A[] \OT1/cmr/m/n/10 = [] \OMS/cmtt/m/n/ 10 ^^A []f\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; [][]\OMS/cmtt/m/n/10 fj\OML/cmm/m /it/10 A[]\OMS/cmtt/m/n/10 j\OML/cmm/m/it/10 ; \OMS/cmtt/m/n/10 j\OML/cmm/m/it/ 10 A[]\OMS/cmtt/m/n/10 jgg$ ) (../../PatchAndGoInfo/doc/proto.tex Overfull \hbox (3.66177pt too wide) in paragraph at lines 5--7 \OT1/cmr/m/n/10 This sec-tion con-tains brief de-scrip-tions in-clud-ing pro-to -types of all meth-ods that be-long to the \OT1/cmtt/m/n/10 PatchAndGoInfo [308]) (../../Pencil/doc/intro.tex [309] Chapter 35. ) (../../Pencil/doc/dataStructure.tex) (../../Pencil/doc/proto.tex [310] [311]) (../../SemiImplMtx/doc/intro.tex [312] Chapter 36. ) (../../SemiImplMtx/doc/dataStructure.tex [313] Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . ) (../../SemiImplMtx/doc/proto.tex Overfull \hbox (7.96838pt too wide) in paragraph at lines 32--41 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns \OT1/cmr/m/n/10 = 0, \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [314] [315]) (../../SemiImplMtx/doc/drivers.tex [316] Overfull \hbox (2.85498pt too wide) in paragraph at lines 111--114 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject is read from the \OT1/cmtt/m/n/10 inFrontMtxFile \OT1/cmr/m/n/10 file, which must be o f the form \OT1/cmtt/m/n/10 *.frontmtxf ) (../../SubMtx/doc/intro.tex [317] Chapter 37. [318]) (../../SubMtx/doc/dataStructure.tex [319]) (../../SubMtx/doc/proto.tex Overfull \hbox (2.80563pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10 The struc-ture's fields are set to de-fault val-ues: \OT1/cmt t/m/n/10 type \OT1/cmr/m/n/10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 = \OT1/cmtt/m/n/10 DENSEMTX[]DENSE[]COLU MNS\OT1/cmr/m/n/10 , [320] [321] Overfull \hbox (36.46364pt too wide) in paragraph at lines 223--237 \OT1/cmtt/m/n/10 [firstlocs[irow],lastlocs[irow]] \OT1/cmr/m/n/10 when $[] \OMS /cmtt/m/n/10 ^^U \OT1/cmr/m/n/10 0$ and $[] \OMS/cmtt/m/n/10 ^^T []$\OT1/cmr/m/ n/10 . [322] [323] [324] [325] [326] [327] Overfull \hbox (38.45969pt too wide) in paragraph at lines 911--917 []\OT1/cmr/m/n/10 This method writes out a \OT1/cmtt/m/n/10 SubMtx \OT1/cmr/m/n /10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/1 0 SubMtx[]writeStats() ) (../../SubMtx/doc/drivers.tex [328] Underfull \hbox (badness 10000) in paragraph at lines 97--106 \OT1/cmr/m/n/10 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]SUBROWS\OT1/cmr/m/n/10 ), 6 (\ OT1/cmtt/m/n/10 SUBMTX[]DENSE[]SUBCOLUMNS\OT1/cmr/m/n/10 ), 7 (\OT1/cmtt/m/n/10 SUBMTX[]DIAGONAL\OT1/cmr/m/n/10 ), [329] Overfull \hbox (65.22816pt too wide) in paragraph at lines 228--234 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) [330] Overfull \hbox (65.22816pt too wide) in paragraph at lines 279--285 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) Overfull \hbox (65.22816pt too wide) in paragraph at lines 331--337 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) [331] Overfull \hbox (65.22816pt too wide) in paragraph at lines 381--387 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) ) (../../SubMtxList/doc/intro.tex [332] Chapter 38. ) (../../SubMtxList/doc/dataStructure.tex [333]) (../../SubMtxList/doc/proto.tex [334]) (../../SubMtxManager/doc/intro.tex [335] Chapter 39. ) (../../SubMtxManager/doc/dataStructure.tex [336]) (../../SubMtxManager/doc/proto.tex [337]) (../../SymbFac/doc/intro.tex [338] Chapter 40. ) (../../SymbFac/doc/dataStructure.tex) (../../SymbFac/doc/proto.tex [339] Overfull \hbox (10.96967pt too wide) in paragraph at lines 54--65 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 etree \OT 1/cmr/m/n/10 or \OT1/cmtt/m/n/10 inpmtx \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NUL L\OT1/cmr/m/n/10 , or if the co-or-di-nate type of \OT1/cmtt/m/n/10 inpmtx \OT1 /cmr/m/n/10 is not \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , ) (../../SymbFac/doc/drivers.tex [340])) (./partMisc.tex [341] [342] (../../misc/doc/intro.tex Chapter 41. ) (../../misc/doc/proto.tex [343] [344] [345] [346]) (../../misc/doc/drivers.tex [347] [348] psfig: searching ../../misc/doc/R2D100notags.eps for bounding box psfig: including ../../misc/doc/R2D100notags.eps psfig: searching ../../misc/doc/R2D100fishnet.eps for bounding box psfig: including ../../misc/doc/R2D100fishnet.eps [349] [350] [351] [352] [353] [354])) (./partMT.tex [355] [356] (../../MT/doc/intro.tex Chapter 42. ) (../../MT/doc/dataStructure.tex) (../../MT/doc/proto.tex [357] Overfull \hbox (63.2698pt too wide) in paragraph at lines 11--27 \OT1/cmr/m/n/10 There are five meth-ods to mul-ti-ply a vec-tor times a dense m a-trix. The first three meth-ods, called \OT1/cmtt/m/n/10 InpMtx[]MT[]nonsym[]m mm*()\OT1/cmr/m/n/10 , Overfull \hbox (34.11732pt too wide) in paragraph at lines 64--75 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [358] Overfull \hbox (34.11732pt too wide) in paragraph at lines 101--112 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (34.11732pt too wide) in paragraph at lines 130--139 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [359] [360]) (../../MT/doc/drivers.tex [361] [362] [363] [364] [365])) (./partMPI.tex [366] [367] (../../MPI/doc/intro.tex Chapter 43. ) (../../MPI/doc/dataStructure.tex Overfull \hbox (0.87425pt too wide) in paragraph at lines 30--34 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 MatMulInfo \OT1/cmr/m/n/10 ob-ject store s all the nec-es-sary in-for-ma-tion to make this hap-pen. There is one \OT1/cm tt/m/n/10 MatMulInfo [368]) (../../MPI/doc/proto.tex Overfull \hbox (59.838pt too wide) in paragraph at lines 97--1 []\OT1/cmr/m/n/10 See the meth-ods \OT1/cmtt/m/n/10 MatMul[]MPI[]setup()\OT1/cm r/m/n/10 , \OT1/cmtt/m/n/10 MatMul[]setLocalIndices()\OT1/cmr/m/n/10 , \OT1/cmt t/m/n/10 MatMul[]setGlobalIndices()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 MatMul[]M PI[]mmm() [369] [370] Overfull \hbox (31.97972pt too wide) in paragraph at lines 249--256 \OT1/cmr/m/n/10 dis-tributed matrix-matrix mul-ti-ply. The gather op-er-a-tion $\OML/cmm/m/it/10 X[] \OMS/cmtt/m/n/10 \OML/cmm/m/it/10 X$ \OT1/cmr/m/n/10 is per-formed by \OT1/cmtt/m/n/10 DenseMtx[]MPI[]gatherRows()\OT1/cmr/m/n/10 , [371] [372] [373] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 []\OT1/cmtt/m/n/10 void FrontMtx_MPI_permuteUpperAdj ( FrontMtx *frontmtx, IV *frontOwnersIV, int stats[],[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 [] \OT1/cmtt/m/n/10 int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 []\OT1/cmtt/m/n/10 void FrontMtx_MPI_permuteLowerAdj ( FrontMtx *frontmtx, IV *frontOwnersIV, int stats[],[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 [] \OT1/cmtt/m/n/10 int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] [374] [375] [376] [377] [378] Overfull \hbox (11.99106pt too wide) in paragraph at lines 981--981 []\OT1/cmtt/m/n/10 void * makeSendRecvIVLs ( IV *supportedIV, IV *globalmapIV, IVL *sendIVL, IVL *recvIVL,[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 981--981 [] \OT1/cmtt/m/n/10 int stats[], int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] ) (../../MPI/doc/drivers.tex [379] [380] [381] [382] Overfull \hbox (31.23914pt too wide) in paragraph at lines 409--426 []\OT1/cmr/m/n/10 This driver pro-gram tests the dis-tributed \OT1/cmtt/m/n/10 IVL[]MPI[]alltoall() \OT1/cmr/m/n/10 method. This is used by the \OT1/cmtt/m/n/ 10 makeSendRecvIVLs [383] [384] [385] [386])) (./main.bbl [387] [388]) (./main.ind [389] [390] [391] [392] [393] [394] [395] [396] [397] [398] [399] [400] [401] [402] [403] [404]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on main.dvi (405 pages, 1607980 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, [1] [1] (./main.toc [2] Underfull \hbox (badness 10000) in paragraph at lines 36--36 [] []\OT1/cmtt/m/n/10 Drand\OT1/cmr/bx/n/10 : [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 145--145 [] []\OT1/cmtt/m/n/10 DSTree\OT1/cmr/bx/n/10 : [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 202--202 [] []\OT1/cmtt/m/n/10 MSMD\OT1/cmr/bx/n/10 : [7] [8] [9] [10] [11] [12]) [13] (./main.lof) (./partIntro.tex [14] [15] Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) Underfull \vbox (badness 10000) has occurred while \output is active [16] [17] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 238. [18] [19] [20]) (./partUtil.tex [21] [22] (../../A2/doc/intro.tex Chapter 2. ) (../../A2/doc/dataStructure.tex Overfull \hbox (22.05931pt too wide) in paragraph at lines 44--54 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 A2[]copyEntriesToVector() \OT1/cmr/m/n/10 method uses the fol-low-ing con-stants: \OT1/cmtt/m/n/10 A2[]STRICT[]LOWER\OT1/ cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]LOWER\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]D IAGONAL\OT1/cmr/m/n/10 , ) (../../A2/doc/proto.tex [23] [24] [25] Overfull \hbox (9.5478pt too wide) in paragraph at lines 290--295 \OT1/cmr/m/n/10 Note, \OT1/cmtt/m/n/10 firstrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/ 10 lastrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 firstcol \OT1/cmr/m/n/10 and \OT1/ cmtt/m/n/10 lastcol \OT1/cmr/m/n/10 must sat-isfy \OT1/cmtt/m/n/10 0 <= firstro w <= lastrow < mtxB->n1 [26] [27] [28] [29] Overfull \hbox (0.273pt too wide) in paragraph at lines 776--779 []\OT1/cmr/m/n/10 This method fills the ma-trix with ran-dom num-bers taken fro m a uni-form dis-tri-bu-tion on \OT1/cmtt/m/n/10 [lower,upper] [30] [31]) (../../A2/doc/drivers.tex [32]) (../../Coords/doc/intro.tex [33] Chapter 3. ) (../../Coords/doc/dataStructure.tex) (../../Coords/doc/proto.tex [34] [35] [36] Overfull \hbox (16.26517pt too wide) in paragraph at lines 330--336 []\OT1/cmr/m/n/10 This method write the \OT1/cmtt/m/n/10 Coords \OT1/cmr/m/n/10 ob-ject to a file in an easy to read fash-ion. The method \OT1/cmtt/m/n/10 Coo rds[]writeStats() ) (../../Coords/doc/drivers.tex [37]) (../../DV/doc/intro.tex [38] Chapter 4. ) (../../DV/doc/dataStructure.tex) (../../DV/doc/proto.tex Overfull \hbox (5.16449pt too wide) in paragraph at lines 23--1 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 max size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nowned \OT1/cmr/m/n/10 and \OT1/cmtt/m/n /10 vec \OT1/cmr/m/n/10 fields need never be ac-cessed di-rectly --- see the \O T1/cmtt/m/n/10 DV[]size()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 DV[]maxsize()\OT1/c mr/m/n/10 , [39] [40] (/usr/share/texmf-texlive/tex/latex/base/omlcmr.fd) [41] [42] [43]) (../../DV/doc/drivers.tex [44]) (../../Drand/doc/intro.tex [45] Chapter 5. ) (../../Drand/doc/dataStructure.tex) (../../Drand/doc/proto.tex [46] [47]) (../../Drand/doc/drivers.tex [48]) (../../I2Ohash/doc/intro.tex [49] Chapter 6. ) (../../I2Ohash/doc/dataStructure.tex) (../../I2Ohash/doc/proto.tex [50] Overfull \hbox (17.40442pt too wide) in paragraph at lines 80--86 []\OT1/cmr/m/n/10 This method is the ba-sic ini-tial-izer method. It clears any pre-vi-ous data with a call to \OT1/cmtt/m/n/10 I2Ohash[]clearData()\OT1/cmr/m /n/10 . [51]) (../../I2Ohash/doc/drivers.tex [52]) (../../IIheap/doc/intro.tex [53] Chapter 7. ) (../../IIheap/doc/dataStructure.tex) (../../IIheap/doc/proto.tex [54] Overfull \hbox (80.88438pt too wide) in paragraph at lines 44--49 \OT1/cmtt/m/n/10 heap->keys \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 heap->values \ OT1/cmr/m/n/10 vec-tors, then sets the struc-ture's de-fault fields with a call to \OT1/cmtt/m/n/10 IIheap[]setDefaultFields()\OT1/cmr/m/n/10 . Overfull \hbox (12.15446pt too wide) in paragraph at lines 80--87 []\OT1/cmr/m/n/10 This method is the ba-sic ini-tial-izer method. It clears any pre-vi-ous data with a call to \OT1/cmtt/m/n/10 IIheap[]clearData()\OT1/cmr/m/ n/10 , ) (../../IV/doc/intro.tex [55] Chapter 8. ) (../../IV/doc/dataStructure.tex [56]) (../../IV/doc/proto.tex [57] [58] [59] [60] [61] [62]) (../../IV/doc/drivers.tex) (../../IVL/doc/intro.tex [63] Chapter 9. ) (../../IVL/doc/dataStructure.tex [64]) (../../IVL/doc/proto.tex [65] Overfull \hbox (1.08043pt too wide) in paragraph at lines 166--171 []\OT1/cmr/m/n/10 This method is used when the num-ber of lists and their to-ta l size is known --- \OT1/cmtt/m/n/10 type \OT1/cmr/m/n/10 must be \OT1/cmtt/m/n /10 IVL[]CHUNKED\OT1/cmr/m/n/10 . Overfull \hbox (1.49115pt too wide) in paragraph at lines 199--199 []\OT1/cmtt/m/n/10 int IVL_initFromSubIVL ( IVL *subIVL, IVL *ivl, IV *keeplis tIV, IV *keepentriesIV ) ;[] [66] [67] [68] [69] [70]) (../../IVL/doc/drivers.tex) (../../Ideq/doc/intro.tex [71] Chapter 10. ) (../../Ideq/doc/dataStructure.tex) (../../Ideq/doc/proto.tex [72] [73]) (../../Lock/doc/intro.tex [74] Chapter 11. ) (../../Lock/doc/dataStructure.tex) (../../Lock/doc/proto.tex [75] Overfull \hbox (18.04205pt too wide) in paragraph at lines 40--47 []\OT1/cmr/m/n/10 This method clears the data for the ob-ject. If \OT1/cmtt/m/n /10 lock->mutex \OT1/cmr/m/n/10 is not \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , t hen \OT1/cmtt/m/n/10 mutex[]destroy(lock->mutex) ) (../../Perm/doc/intro.tex [76] Chapter 12. ) (../../Perm/doc/dataStructure.tex) (../../Perm/doc/proto.tex [77] [78] [79] Overfull \hbox (17.45987pt too wide) in paragraph at lines 317--323 []\OT1/cmr/m/n/10 This method writes out a \OT1/cmtt/m/n/10 Perm \OT1/cmr/m/n/1 0 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Perm[]writeStats() ) (../../Utilities/doc/intro.tex [80] Chapter 13. ) (../../Utilities/doc/dataStructure.tex) (../../Utilities/doc/proto.tex (../../Utilities/doc/CV.tex [81]) (../../Utilities/doc/DV.tex [82] [83] [84] [85] [86] [87]) (../../Utilities/doc/ZV.tex Overfull \hbox (23.13327pt too wide) in paragraph at lines 51--57 []\OT1/cmr/m/n/10 This method fills \OT1/cmtt/m/n/10 *pbreal \OT1/cmr/m/n/10 an d \OT1/cmtt/m/n/10 *pbimag \OT1/cmr/m/n/10 with the real and imag-i-nary parts of the re-cip-ro-cal of \OT1/cmtt/m/n/10 (areal,aimag)\OT1/cmr/m/n/10 . [88] [89] [90] [91] [92] [93]) (../../Utilities/doc/IV.tex [94] [95]) (../../Utilities/doc/FV.tex [96] [97]) (../../Utilities/doc/PCV.tex [98]) (../../Utilities/doc/PDV.tex) (../../Utilities/doc/PIV.tex) (../../Utilities/doc/PFV.tex [99]) (../../Utilities/doc/sort.tex [100] [101] [102]) (../../Utilities/doc/IP.tex [103]) (../../Utilities/doc/I2OP.tex Overfull \hbox (4.87234pt too wide) in paragraph at lines 57--62 []\OT1/cmr/m/n/10 This is an ini-tial-izer method for a vec-tor of \OT1/cmtt/m/ n/10 I2OP \OT1/cmr/m/n/10 struc-tures. We set \OT1/cmtt/m/n/10 base[i].value0 = base[i].value1 )) (../../Utilities/doc/drivers.tex [104]) (../../ZV/doc/intro.tex [105] Chapter 14. ) (../../ZV/doc/dataStructure.tex) (../../ZV/doc/proto.tex Overfull \hbox (5.16449pt too wide) in paragraph at lines 23--1 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 max size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nowned \OT1/cmr/m/n/10 and \OT1/cmtt/m/n /10 vec \OT1/cmr/m/n/10 fields need never be ac-cessed di-rectly --- see the \O T1/cmtt/m/n/10 ZV[]size()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 ZV[]maxsize()\OT1/c mr/m/n/10 , [106] [107] [108] [109] [110]) (../../ZV/doc/drivers.tex [111])) (./partOrder.tex [112] [113] (../../BKL/doc/intro.tex Chapter 15. ) (../../BKL/doc/dataStructure.tex [114]) (../../BKL/doc/proto.tex [115] [116] [117]) (../../BPG/doc/intro.tex [118] Chapter 16. [119] [120]) (../../BPG/doc/dataStructure.tex) (../../BPG/doc/proto.tex [121] [122] Overfull \hbox (66.05252pt too wide) in paragraph at lines 260--262 []\OT1/cmr/m/n/10 This method has the same func-tion-al-ity, call-ing se-quence and re-turned val-ues as the pre-ced-ing \OT1/cmtt/m/n/10 BPG[]DMdecomposition () [123]) (../../BPG/doc/drivers.tex [124]) (../../DSTree/doc/intro.tex [125] Chapter 17. ) (../../DSTree/doc/dataStructure.tex) (../../DSTree/doc/proto.tex [126] [127] [128] [129] Overfull \hbox (21.79298pt too wide) in paragraph at lines 428--437 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 DSTree \OT1/cmr/m/n/10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 DS Tree[]writeStats() ) (../../DSTree/doc/drivers.tex [130]) (../../EGraph/doc/intro.tex [131] Chapter 18. ) (../../EGraph/doc/dataStructure.tex) (../../EGraph/doc/proto.tex [132] [133] Overfull \hbox (27.34856pt too wide) in paragraph at lines 264--274 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 EGraph \OT1/cmr/m/n/10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 E Graph[]writeStats() Overfull \hbox (59.98613pt too wide) in paragraph at lines 264--274 \OT1/cmr/m/n/10 is called to write out the header and statis-tics. Then the \OT 1/cmtt/m/n/10 adjIVL \OT1/cmr/m/n/10 ob-ject is writ-ten out us-ing \OT1/cmtt/m /n/10 IVL[]writeForHumanEye()\OT1/cmr/m/n/10 . [134]) (../../EGraph/doc/drivers.tex [135]) (../../ETree/doc/intro.tex [136] Chapter 19. ) (../../ETree/doc/dataStructure.tex) (../../ETree/doc/proto.tex [137] Overfull \hbox (10.32721pt too wide) in paragraph at lines 32--35 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields are set to de-fault val-ues: \OT1/cmtt/m/n/10 nfront = nvtx = 0\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 t ree = nodwghtsIV [138] [139] [140] Overfull \hbox (6.7411pt too wide) in paragraph at lines 354--354 []\OT1/cmtt/m/n/10 int ETree_initFromSubtree ( ETree *subtree, IV *nodeidsIV, ETree *etree, IV *vtxIV ) ;[] Overfull \hbox (9.87708pt too wide) in paragraph at lines 468--475 \OT1/cmr/m/n/10 (1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 2)$ blocks dur-ing a fac-t or-iza-tion. The \OT1/cmtt/m/n/10 type \OT1/cmr/m/n/10 pa-ram-e-ter can be one of \OT1/cmtt/m/n/10 SPOOLES[]REAL \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[] COMPLEX\OT1/cmr/m/n/10 . [141] Overfull \hbox (22.49097pt too wide) in paragraph at lines 565--565 []\OT1/cmtt/m/n/10 ETree * ETree_spliceTwoEtrees ( ETree *etree0, Graph *graph , IV *mapIV, ETree *etree1 ) ;[] [142] [143] [144] [145] [146] Overfull \hbox (14.4601pt too wide) in paragraph at lines 1095--1102 \OT1/cmr/m/n/10 us-ing \OT1/cmtt/m/n/10 ETree[]mergeFrontsOne() \OT1/cmr/m/n/10 fol-lowed by \OT1/cmtt/m/n/10 ETree[]mergeFrontsAll()\OT1/cmr/m/n/10 . See the driver pro-grams \OT1/cmtt/m/n/10 testTransform [147] [148] [149] [150] Overfull \hbox (30.76532pt too wide) in paragraph at lines 1493--1501 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 ETree \OT1/cmr/m/n/10 ob-ject to a file in a read-able for-mat. Oth-er-wise, the method \OT1/cmtt/m/n /10 ETree[]writeStats() ) (../../ETree/doc/drivers.tex [151] [152] [153] Overfull \hbox (31.12537pt too wide) in paragraph at lines 320--328 \OT1/cmtt/m/n/10 outETreeFile \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 none \OT1/cmr /m/n/10 then the \OT1/cmtt/m/n/10 ETree \OT1/cmr/m/n/10 ob-ject is not writ-ten to a file. Oth-er-wise, the \OT1/cmtt/m/n/10 ETree[]writeToFile() [154] psfig: searching ../../ETree/doc/FS1.eps for bounding box psfig: including ../../ETree/doc/FS1.eps psfig: searching ../../ETree/doc/FS2.eps for bounding box psfig: including ../../ETree/doc/FS2.eps [155] [156] [157] psfig: searching ../../ETree/doc/GRD7x7x7_nzA.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzA.eps psfig: searching ../../ETree/doc/GRD7x7x7_nzF.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzF.eps psfig: searching ../../ETree/doc/GRD7x7x7_forwops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_forwops.eps psfig: searching ../../ETree/doc/GRD7x7x7_backops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_backops.eps psfig: searching ../../ETree/doc/workingStorage.eps for bounding box psfig: including ../../ETree/doc/workingStorage.eps [158] [159]) (../../GPart/doc/intro.tex [160] [161] Chapter 20. ) (../../GPart/doc/dataStructure.tex [162] [163]) (../../GPart/doc/proto.tex [164] [165] [166] [167] [168] [169]) (../../GPart/doc/drivers.tex [170] [171] [172]) (../../Graph/doc/intro.tex [173] Chapter 21. [174]) (../../Graph/doc/dataStructure.tex) (../../Graph/doc/proto.tex [175] [176] [177] [178] [179] Overfull \hbox (11.29308pt too wide) in paragraph at lines 531--536 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 Graph \OT1/cmr/m/n/10 o b-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Gra ph[]writeStats() ) (../../Graph/doc/drivers.tex [180] [181] Overfull \hbox (27.02443pt too wide) in paragraph at lines 200--204 []\OT1/cmr/m/n/10 This driver pro-gram reads in a \OT1/cmtt/m/n/10 Graph \OT1/c mr/m/n/10 ob-ject and tests whether it is sym-met-ric us-ing the \OT1/cmtt/m/n/ 10 Graph[]isSymmetric() psfig: searching ../../Graph/doc/rad1.eps for bounding box psfig: including ../../Graph/doc/rad1.eps psfig: searching ../../Graph/doc/rad2.eps for bounding box psfig: including ../../Graph/doc/rad2.eps [182]) (../../MSMD/doc/intro.tex [183] Chapter 22. [184]) (../../MSMD/doc/dataStructure.tex [185] [186] [187]) (../../MSMD/doc/proto.tex [188] [189] [190] Overfull \hbox (39.69234pt too wide) in paragraph at lines 336--339 []\OT1/cmr/m/n/10 This method cleans the nodes in the reach set by call-ing \OT 1/cmtt/m/n/10 MSMD[]cleanSubtreeList() \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 MSM D[]clearEdgeList()\OT1/cmr/m/n/10 . [191]) (../../MSMD/doc/drivers.tex [192] Overfull \hbox (2.44388pt too wide) in paragraph at lines 72--75 []\OT1/cmtt/m/n/10 stepType == 0 \OT1/cmr/m/n/10 --- one ver-tex elim-i-nated a t each step, like YSMP, and QMD from SPARSPAK. [193]) (../../Network/doc/intro.tex [194] Chapter 23. [195]) (../../Network/doc/dataStructure.tex [196]) (../../Network/doc/proto.tex [197] [198] Overfull \hbox (10.01547pt too wide) in paragraph at lines 232--238 []\OT1/cmr/m/n/10 This method writes the net-work to a file in a hu-man read-ab le for-mat. The method \OT1/cmtt/m/n/10 Network[]writeStats() ) (../../SolveMap/doc/intro.tex [199] Chapter 24. ) (../../SolveMap/doc/dataStructure.tex) (../../SolveMap/doc/proto.tex [200] [201] Overfull \hbox (1.13116pt too wide) in paragraph at lines 223--230 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 solvemap \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or \OT1/cmtt/m/n/10 s ymmetryflag \OT1/cmr/m/n/10 is in-valid, or \OT1/cmtt/m/n/10 nfront\OT1/cmr/m/n /10 , \OT1/cmtt/m/n/10 nblockUpper\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nblockLowe r [202] [203] Overfull \hbox (43.46613pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 mapidsUpper[*]\OT1/cmr/m/n/10 , and if \OT 1/cmtt/m/n/10 symmetryflag = SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10 , fol-lowed b y \OT1/cmtt/m/n/10 rowidsLower[*]\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 colidsLower [*] [204] Overfull \hbox (48.40392pt too wide) in paragraph at lines 508--513 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 SolveMap \OT1/cmr/m/n/ 10 ob-ject to a file in an eas-ily read-able for-mat. The method \OT1/cmtt/m/n/ 10 SolveMap[]writeStats() ) (../../Tree/doc/intro.tex [205] Chapter 25. ) (../../Tree/doc/dataStructure.tex) (../../Tree/doc/proto.tex [206] [207] [208] [209] [210] [211] [212] Overfull \hbox (0.79317pt too wide) in paragraph at lines 830--837 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 Perm \OT1/cmr/m/n/10 ob -ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Tree []writeStats() [213]) (../../Tree/doc/drivers.tex psfig: searching ../../Tree/doc/R2D100HC.eps for bounding box psfig: including ../../Tree/doc/R2D100HC.eps psfig: searching ../../Tree/doc/R2D100DC.eps for bounding box psfig: including ../../Tree/doc/R2D100DC.eps psfig: searching ../../Tree/doc/R2D100HP.eps for bounding box psfig: including ../../Tree/doc/R2D100HP.eps psfig: searching ../../Tree/doc/R2D100DP.eps for bounding box psfig: including ../../Tree/doc/R2D100DP.eps )) (./partNumeric.tex [214] [215] [216] (../../Chv/doc/intro.tex Chapter 26. psfig: searching ../../Chv/doc/simple.eps for bounding box psfig: including ../../Chv/doc/simple.eps [217] psfig: searching ../../Chv/doc/simple2.eps for bounding box psfig: including ../../Chv/doc/simple2.eps ) (../../Chv/doc/dataStructure.tex [218]) (../../Chv/doc/proto.tex [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229]) (../../Chv/doc/drivers.tex [230] Overfull \hbox (28.32214pt too wide) in paragraph at lines 99--107 \OT1/cmr/m/n/10 been fac-tored to store the en-tries into dense $\OML/cmm/m/it/ 10 L$ \OT1/cmr/m/n/10 and $\OML/cmm/m/it/10 U$ \OT1/cmr/m/n/10 sub-ma-tri-ces. Use the script file \OT1/cmtt/m/n/10 do[]copyEntriesToVector [231] [232] [233] Overfull \hbox (47.11063pt too wide) in paragraph at lines 406--415 []\OT1/cmr/m/n/10 This driver pro-gram tests three meth-ods: \OT1/cmtt/m/n/10 C hv[]swapRowsAndColumns()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 Chv[]swapRows() \OT1 /cmr/m/n/10 and \OT1/cmtt/m/n/10 Chv[]swapColumns()\OT1/cmr/m/n/10 . [234]) (../../ChvList/doc/intro.tex [235] Chapter 27. ) (../../ChvList/doc/dataStructure.tex [236]) (../../ChvList/doc/proto.tex [237]) (../../ChvManager/doc/intro.tex [238] Chapter 28. ) (../../ChvManager/doc/dataStructure.tex [239]) (../../ChvManager/doc/proto.tex [240]) (../../DenseMtx/doc/intro.tex [241] Chapter 29. ) (../../DenseMtx/doc/dataStructure.tex) (../../DenseMtx/doc/proto.tex [242] [243] [244] [245] [246] [247] [248]) (../../FrontMtx/doc/intro.tex [249] Chapter 30. psfig: searching ../../FrontMtx/doc/simple.eps for bounding box psfig: including ../../FrontMtx/doc/simple.eps [250] [251]) (../../FrontMtx/doc/dataStructure.tex [252] [253]) (../../FrontMtx/doc/proto.tex [254] [255] [256] [257] Overfull \hbox (13.35185pt too wide) in paragraph at lines 368--376 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 frontmtx\ OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/1 0 symbfacIVL \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if \O T1/cmtt/m/n/10 type\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetryflag\OT1/cmr/m/n/ 10 , \OT1/cmtt/m/n/10 sparsityflag [258] Overfull \hbox (24.57285pt too wide) in paragraph at lines 503--508 \OT1/cmr/m/n/10 gre-gate fronts and help syn-chro-nize the fac-tor-iza-tion. Th ere is an anal-o-gous \OT1/cmtt/m/n/10 FrontMtx[]MPI[]aggregateList() [259] [260] [261] Overfull \hbox (1.49115pt too wide) in paragraph at lines 765--765 [] \OT1/cmtt/m/n/10 ChvManager *chvmanager, int msglvl, FILE *msgFile ) ;[] [262] [263] [264] [265] [266] Overfull \hbox (42.7928pt too wide) in paragraph at lines 1297--1302 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/1 0 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 FrontMtx[]writeStats() ) (../../FrontMtx/doc/drivers.tex [267]) (../../ILUMtx/doc/intro.tex [268] Chapter 31. ) (../../ILUMtx/doc/dataStructure.tex Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . [269]) (../../ILUMtx/doc/proto.tex Overfull \hbox (11.74596pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns = 0\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [270] [271]) (../../ILUMtx/doc/drivers.tex [272]) (../../InpMtx/doc/intro.tex [273] Chapter 32. [274]) (../../InpMtx/doc/dataStructure.tex [275] Overfull \hbox (10.7373pt too wide) in paragraph at lines 74--79 []\OT1/cmtt/m/n/10 int maxnvector \OT1/cmr/m/n/10 -- present max-i-mum num-ber of vec-tors. This quan-tity is ini-tial-ized by the \OT1/cmtt/m/n/10 InpMtx[]in it() [276]) (../../InpMtx/doc/proto.tex [277] [278] [279] Overfull \hbox (9.61465pt too wide) in paragraph at lines 390--400 []\OT1/cmr/m/n/10 This method changes the co-or-di-nate type. If $[] = []$, the pro-gram re-turns. If $[] \OMS/cmtt/m/n/10 ^^U [280] [281] [282] Overfull \hbox (34.11732pt too wide) in paragraph at lines 734--745 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (6.7411pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector ( InpMtx *A, DenseMtx *Y, doub le alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_T ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_H ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] [283] Overfull \hbox (34.11732pt too wide) in paragraph at lines 787--798 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [284] Overfull \hbox (11.27731pt too wide) in paragraph at lines 964--972 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , Overfull \hbox (11.27731pt too wide) in paragraph at lines 980--988 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , [285] [286] [287] Overfull \hbox (13.68219pt too wide) in paragraph at lines 1411--1418 []\OT1/cmr/m/n/10 This method writes the ob-ject to a file suit-able for read-i ng by a hu-man. The method \OT1/cmtt/m/n/10 InpMtx[]writeStats() [288] Overfull \hbox (10.59344pt too wide) in paragraph at lines 1465--1471 \OT1/cmtt/m/n/10 readHB[]mat[]double() \OT1/cmr/m/n/10 from the Harwell-Boeing C IO rou-tines from NIST[], found in the \OT1/cmtt/m/n/10 misc/src/iohb.c ) (../../InpMtx/doc/drivers.tex [289] [290] [291] [292] psfig: searching ../../InpMtx/doc/BCSSTK23.eps for bounding box psfig: including ../../InpMtx/doc/BCSSTK23.eps [293] [294] [295]) (../../Iter/doc/intro.tex [296] Chapter 33. Overfull \hbox (5.20291pt too wide) in paragraph at lines 4--15 \OT1/cmtt/m/n/10 Iter \OT1/cmr/m/n/10 is com-posed of 5 Krylov space it-er-a-ti ve meth-ods, PCG (Pre-con-di-tioned Con-ju-gate Gra-di-ents), BiCGStab, ) (../../Iter/doc/dataStructure.tex) (../../Iter/doc/proto.tex [297] [298] [299] [300] [301]) (../../Iter/doc/drivers.tex [302] [303] [304] [305]) (../../PatchAndGoInfo/doc/intro.tex [306] Chapter 34. ) (../../PatchAndGoInfo/doc/dataStructure.tex [307] Overfull \hbox (58.84337pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 2 \OT1/cmr/m/n/10 --- used with struc-tural anal-y-sis ma-tr i-ces, if $\OMS/cmtt/m/n/10 j\OML/cmm/m/it/10 A[]\OMS/cmtt/m/n/10 j ^^T []$ \OT 1/cmr/m/n/10 then set $\OML/cmm/m/it/10 A[] \OT1/cmr/m/n/10 = [] \OMS/cmtt/m/n/ 10 ^^A []f\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; [][]\OMS/cmtt/m/n/10 fj\OML/cmm/m /it/10 A[]\OMS/cmtt/m/n/10 j\OML/cmm/m/it/10 ; \OMS/cmtt/m/n/10 j\OML/cmm/m/it/ 10 A[]\OMS/cmtt/m/n/10 jgg$ ) (../../PatchAndGoInfo/doc/proto.tex Overfull \hbox (3.66177pt too wide) in paragraph at lines 5--7 \OT1/cmr/m/n/10 This sec-tion con-tains brief de-scrip-tions in-clud-ing pro-to -types of all meth-ods that be-long to the \OT1/cmtt/m/n/10 PatchAndGoInfo [308]) (../../Pencil/doc/intro.tex [309] Chapter 35. ) (../../Pencil/doc/dataStructure.tex) (../../Pencil/doc/proto.tex [310] [311]) (../../SemiImplMtx/doc/intro.tex [312] Chapter 36. ) (../../SemiImplMtx/doc/dataStructure.tex [313] Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . ) (../../SemiImplMtx/doc/proto.tex Overfull \hbox (7.96838pt too wide) in paragraph at lines 32--41 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns \OT1/cmr/m/n/10 = 0, \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [314] [315]) (../../SemiImplMtx/doc/drivers.tex [316] Overfull \hbox (2.85498pt too wide) in paragraph at lines 111--114 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject is read from the \OT1/cmtt/m/n/10 inFrontMtxFile \OT1/cmr/m/n/10 file, which must be o f the form \OT1/cmtt/m/n/10 *.frontmtxf ) (../../SubMtx/doc/intro.tex [317] Chapter 37. [318]) (../../SubMtx/doc/dataStructure.tex [319]) (../../SubMtx/doc/proto.tex Overfull \hbox (2.80563pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10 The struc-ture's fields are set to de-fault val-ues: \OT1/cmt t/m/n/10 type \OT1/cmr/m/n/10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 = \OT1/cmtt/m/n/10 DENSEMTX[]DENSE[]COLU MNS\OT1/cmr/m/n/10 , [320] [321] Overfull \hbox (36.46364pt too wide) in paragraph at lines 223--237 \OT1/cmtt/m/n/10 [firstlocs[irow],lastlocs[irow]] \OT1/cmr/m/n/10 when $[] \OMS /cmtt/m/n/10 ^^U \OT1/cmr/m/n/10 0$ and $[] \OMS/cmtt/m/n/10 ^^T []$\OT1/cmr/m/ n/10 . [322] [323] [324] [325] [326] [327] Overfull \hbox (38.45969pt too wide) in paragraph at lines 911--917 []\OT1/cmr/m/n/10 This method writes out a \OT1/cmtt/m/n/10 SubMtx \OT1/cmr/m/n /10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/1 0 SubMtx[]writeStats() ) (../../SubMtx/doc/drivers.tex [328] Underfull \hbox (badness 10000) in paragraph at lines 97--106 \OT1/cmr/m/n/10 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]SUBROWS\OT1/cmr/m/n/10 ), 6 (\ OT1/cmtt/m/n/10 SUBMTX[]DENSE[]SUBCOLUMNS\OT1/cmr/m/n/10 ), 7 (\OT1/cmtt/m/n/10 SUBMTX[]DIAGONAL\OT1/cmr/m/n/10 ), [329] Overfull \hbox (65.22816pt too wide) in paragraph at lines 228--234 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) [330] Overfull \hbox (65.22816pt too wide) in paragraph at lines 279--285 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) Overfull \hbox (65.22816pt too wide) in paragraph at lines 331--337 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) [331] Overfull \hbox (65.22816pt too wide) in paragraph at lines 381--387 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) ) (../../SubMtxList/doc/intro.tex [332] Chapter 38. ) (../../SubMtxList/doc/dataStructure.tex [333]) (../../SubMtxList/doc/proto.tex [334]) (../../SubMtxManager/doc/intro.tex [335] Chapter 39. ) (../../SubMtxManager/doc/dataStructure.tex [336]) (../../SubMtxManager/doc/proto.tex [337]) (../../SymbFac/doc/intro.tex [338] Chapter 40. ) (../../SymbFac/doc/dataStructure.tex) (../../SymbFac/doc/proto.tex [339] Overfull \hbox (10.96967pt too wide) in paragraph at lines 54--65 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 etree \OT 1/cmr/m/n/10 or \OT1/cmtt/m/n/10 inpmtx \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NUL L\OT1/cmr/m/n/10 , or if the co-or-di-nate type of \OT1/cmtt/m/n/10 inpmtx \OT1 /cmr/m/n/10 is not \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , ) (../../SymbFac/doc/drivers.tex [340])) (./partMisc.tex [341] [342] (../../misc/doc/intro.tex Chapter 41. ) (../../misc/doc/proto.tex [343] [344] [345] [346]) (../../misc/doc/drivers.tex [347] [348] psfig: searching ../../misc/doc/R2D100notags.eps for bounding box psfig: including ../../misc/doc/R2D100notags.eps psfig: searching ../../misc/doc/R2D100fishnet.eps for bounding box psfig: including ../../misc/doc/R2D100fishnet.eps [349] [350] [351] [352] [353] [354])) (./partMT.tex [355] [356] (../../MT/doc/intro.tex Chapter 42. ) (../../MT/doc/dataStructure.tex) (../../MT/doc/proto.tex [357] Overfull \hbox (63.2698pt too wide) in paragraph at lines 11--27 \OT1/cmr/m/n/10 There are five meth-ods to mul-ti-ply a vec-tor times a dense m a-trix. The first three meth-ods, called \OT1/cmtt/m/n/10 InpMtx[]MT[]nonsym[]m mm*()\OT1/cmr/m/n/10 , Overfull \hbox (34.11732pt too wide) in paragraph at lines 64--75 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [358] Overfull \hbox (34.11732pt too wide) in paragraph at lines 101--112 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (34.11732pt too wide) in paragraph at lines 130--139 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [359] [360]) (../../MT/doc/drivers.tex [361] [362] [363] [364] [365])) (./partMPI.tex [366] [367] (../../MPI/doc/intro.tex Chapter 43. ) (../../MPI/doc/dataStructure.tex Overfull \hbox (0.87425pt too wide) in paragraph at lines 30--34 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 MatMulInfo \OT1/cmr/m/n/10 ob-ject store s all the nec-es-sary in-for-ma-tion to make this hap-pen. There is one \OT1/cm tt/m/n/10 MatMulInfo [368]) (../../MPI/doc/proto.tex Overfull \hbox (59.838pt too wide) in paragraph at lines 97--1 []\OT1/cmr/m/n/10 See the meth-ods \OT1/cmtt/m/n/10 MatMul[]MPI[]setup()\OT1/cm r/m/n/10 , \OT1/cmtt/m/n/10 MatMul[]setLocalIndices()\OT1/cmr/m/n/10 , \OT1/cmt t/m/n/10 MatMul[]setGlobalIndices()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 MatMul[]M PI[]mmm() [369] [370] Overfull \hbox (31.97972pt too wide) in paragraph at lines 249--256 \OT1/cmr/m/n/10 dis-tributed matrix-matrix mul-ti-ply. The gather op-er-a-tion $\OML/cmm/m/it/10 X[] \OMS/cmtt/m/n/10 \OML/cmm/m/it/10 X$ \OT1/cmr/m/n/10 is per-formed by \OT1/cmtt/m/n/10 DenseMtx[]MPI[]gatherRows()\OT1/cmr/m/n/10 , [371] [372] [373] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 []\OT1/cmtt/m/n/10 void FrontMtx_MPI_permuteUpperAdj ( FrontMtx *frontmtx, IV *frontOwnersIV, int stats[],[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 [] \OT1/cmtt/m/n/10 int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 []\OT1/cmtt/m/n/10 void FrontMtx_MPI_permuteLowerAdj ( FrontMtx *frontmtx, IV *frontOwnersIV, int stats[],[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 [] \OT1/cmtt/m/n/10 int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] [374] [375] [376] [377] [378] Overfull \hbox (11.99106pt too wide) in paragraph at lines 981--981 []\OT1/cmtt/m/n/10 void * makeSendRecvIVLs ( IV *supportedIV, IV *globalmapIV, IVL *sendIVL, IVL *recvIVL,[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 981--981 [] \OT1/cmtt/m/n/10 int stats[], int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] ) (../../MPI/doc/drivers.tex [379] [380] [381] [382] Overfull \hbox (31.23914pt too wide) in paragraph at lines 409--426 []\OT1/cmr/m/n/10 This driver pro-gram tests the dis-tributed \OT1/cmtt/m/n/10 IVL[]MPI[]alltoall() \OT1/cmr/m/n/10 method. This is used by the \OT1/cmtt/m/n/ 10 makeSendRecvIVLs [383] [384] [385] [386])) (./main.bbl [387] [388]) (./main.ind [389] [390] [391] [392] [393] [394] [395] [396] [397] [398] [399] [400] [401] [402] [403] [404]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (405 pages, 1607980 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, Underfull \hbox (badness 3635) in paragraph at lines 90--90 [][]\OT1/cmr/m/n/9 Boeing Shared Ser-vices Group, P. O. Box 24346, Mail Stop 7L -22, Seat-tle, Wash-ing-ton 98124, [1] [1] (./main.toc [2] Underfull \hbox (badness 10000) in paragraph at lines 36--36 [] []\OT1/cmtt/m/n/10 Drand\OT1/cmr/bx/n/10 : [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 145--145 [] []\OT1/cmtt/m/n/10 DSTree\OT1/cmr/bx/n/10 : [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 202--202 [] []\OT1/cmtt/m/n/10 MSMD\OT1/cmr/bx/n/10 : [7] [8] [9] [10] [11] [12]) [13] (./main.lof) (./partIntro.tex [14] [15] Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) Underfull \vbox (badness 10000) has occurred while \output is active [16] [17] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 238. [18] [19] [20]) (./partUtil.tex [21] [22] (../../A2/doc/intro.tex Chapter 2. ) (../../A2/doc/dataStructure.tex Overfull \hbox (22.05931pt too wide) in paragraph at lines 44--54 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 A2[]copyEntriesToVector() \OT1/cmr/m/n/10 method uses the fol-low-ing con-stants: \OT1/cmtt/m/n/10 A2[]STRICT[]LOWER\OT1/ cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]LOWER\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]D IAGONAL\OT1/cmr/m/n/10 , ) (../../A2/doc/proto.tex [23] [24] [25] Overfull \hbox (9.5478pt too wide) in paragraph at lines 290--295 \OT1/cmr/m/n/10 Note, \OT1/cmtt/m/n/10 firstrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/ 10 lastrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 firstcol \OT1/cmr/m/n/10 and \OT1/ cmtt/m/n/10 lastcol \OT1/cmr/m/n/10 must sat-isfy \OT1/cmtt/m/n/10 0 <= firstro w <= lastrow < mtxB->n1 [26] [27] [28] [29] Overfull \hbox (0.273pt too wide) in paragraph at lines 776--779 []\OT1/cmr/m/n/10 This method fills the ma-trix with ran-dom num-bers taken fro m a uni-form dis-tri-bu-tion on \OT1/cmtt/m/n/10 [lower,upper] [30] [31]) (../../A2/doc/drivers.tex [32]) (../../Coords/doc/intro.tex [33] Chapter 3. ) (../../Coords/doc/dataStructure.tex) (../../Coords/doc/proto.tex [34] [35] [36] Overfull \hbox (16.26517pt too wide) in paragraph at lines 330--336 []\OT1/cmr/m/n/10 This method write the \OT1/cmtt/m/n/10 Coords \OT1/cmr/m/n/10 ob-ject to a file in an easy to read fash-ion. The method \OT1/cmtt/m/n/10 Coo rds[]writeStats() ) (../../Coords/doc/drivers.tex [37]) (../../DV/doc/intro.tex [38] Chapter 4. ) (../../DV/doc/dataStructure.tex) (../../DV/doc/proto.tex Overfull \hbox (5.16449pt too wide) in paragraph at lines 23--1 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 max size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nowned \OT1/cmr/m/n/10 and \OT1/cmtt/m/n /10 vec \OT1/cmr/m/n/10 fields need never be ac-cessed di-rectly --- see the \O T1/cmtt/m/n/10 DV[]size()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 DV[]maxsize()\OT1/c mr/m/n/10 , [39] [40] (/usr/share/texmf-texlive/tex/latex/base/omlcmr.fd) [41] [42] [43]) (../../DV/doc/drivers.tex [44]) (../../Drand/doc/intro.tex [45] Chapter 5. ) (../../Drand/doc/dataStructure.tex) (../../Drand/doc/proto.tex [46] [47]) (../../Drand/doc/drivers.tex [48]) (../../I2Ohash/doc/intro.tex [49] Chapter 6. ) (../../I2Ohash/doc/dataStructure.tex) (../../I2Ohash/doc/proto.tex [50] Overfull \hbox (17.40442pt too wide) in paragraph at lines 80--86 []\OT1/cmr/m/n/10 This method is the ba-sic ini-tial-izer method. It clears any pre-vi-ous data with a call to \OT1/cmtt/m/n/10 I2Ohash[]clearData()\OT1/cmr/m /n/10 . [51]) (../../I2Ohash/doc/drivers.tex [52]) (../../IIheap/doc/intro.tex [53] Chapter 7. ) (../../IIheap/doc/dataStructure.tex) (../../IIheap/doc/proto.tex [54] Overfull \hbox (80.88438pt too wide) in paragraph at lines 44--49 \OT1/cmtt/m/n/10 heap->keys \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 heap->values \ OT1/cmr/m/n/10 vec-tors, then sets the struc-ture's de-fault fields with a call to \OT1/cmtt/m/n/10 IIheap[]setDefaultFields()\OT1/cmr/m/n/10 . Overfull \hbox (12.15446pt too wide) in paragraph at lines 80--87 []\OT1/cmr/m/n/10 This method is the ba-sic ini-tial-izer method. It clears any pre-vi-ous data with a call to \OT1/cmtt/m/n/10 IIheap[]clearData()\OT1/cmr/m/ n/10 , ) (../../IV/doc/intro.tex [55] Chapter 8. ) (../../IV/doc/dataStructure.tex [56]) (../../IV/doc/proto.tex [57] [58] [59] [60] [61] [62]) (../../IV/doc/drivers.tex) (../../IVL/doc/intro.tex [63] Chapter 9. ) (../../IVL/doc/dataStructure.tex [64]) (../../IVL/doc/proto.tex [65] Overfull \hbox (1.08043pt too wide) in paragraph at lines 166--171 []\OT1/cmr/m/n/10 This method is used when the num-ber of lists and their to-ta l size is known --- \OT1/cmtt/m/n/10 type \OT1/cmr/m/n/10 must be \OT1/cmtt/m/n /10 IVL[]CHUNKED\OT1/cmr/m/n/10 . Overfull \hbox (1.49115pt too wide) in paragraph at lines 199--199 []\OT1/cmtt/m/n/10 int IVL_initFromSubIVL ( IVL *subIVL, IVL *ivl, IV *keeplis tIV, IV *keepentriesIV ) ;[] [66] [67] [68] [69] [70]) (../../IVL/doc/drivers.tex) (../../Ideq/doc/intro.tex [71] Chapter 10. ) (../../Ideq/doc/dataStructure.tex) (../../Ideq/doc/proto.tex [72] [73]) (../../Lock/doc/intro.tex [74] Chapter 11. ) (../../Lock/doc/dataStructure.tex) (../../Lock/doc/proto.tex [75] Overfull \hbox (18.04205pt too wide) in paragraph at lines 40--47 []\OT1/cmr/m/n/10 This method clears the data for the ob-ject. If \OT1/cmtt/m/n /10 lock->mutex \OT1/cmr/m/n/10 is not \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , t hen \OT1/cmtt/m/n/10 mutex[]destroy(lock->mutex) ) (../../Perm/doc/intro.tex [76] Chapter 12. ) (../../Perm/doc/dataStructure.tex) (../../Perm/doc/proto.tex [77] [78] [79] Overfull \hbox (17.45987pt too wide) in paragraph at lines 317--323 []\OT1/cmr/m/n/10 This method writes out a \OT1/cmtt/m/n/10 Perm \OT1/cmr/m/n/1 0 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Perm[]writeStats() ) (../../Utilities/doc/intro.tex [80] Chapter 13. ) (../../Utilities/doc/dataStructure.tex) (../../Utilities/doc/proto.tex (../../Utilities/doc/CV.tex [81]) (../../Utilities/doc/DV.tex [82] [83] [84] [85] [86] [87]) (../../Utilities/doc/ZV.tex Overfull \hbox (23.13327pt too wide) in paragraph at lines 51--57 []\OT1/cmr/m/n/10 This method fills \OT1/cmtt/m/n/10 *pbreal \OT1/cmr/m/n/10 an d \OT1/cmtt/m/n/10 *pbimag \OT1/cmr/m/n/10 with the real and imag-i-nary parts of the re-cip-ro-cal of \OT1/cmtt/m/n/10 (areal,aimag)\OT1/cmr/m/n/10 . [88] [89] [90] [91] [92] [93]) (../../Utilities/doc/IV.tex [94] [95]) (../../Utilities/doc/FV.tex [96] [97]) (../../Utilities/doc/PCV.tex [98]) (../../Utilities/doc/PDV.tex) (../../Utilities/doc/PIV.tex) (../../Utilities/doc/PFV.tex [99]) (../../Utilities/doc/sort.tex [100] [101] [102]) (../../Utilities/doc/IP.tex [103]) (../../Utilities/doc/I2OP.tex Overfull \hbox (4.87234pt too wide) in paragraph at lines 57--62 []\OT1/cmr/m/n/10 This is an ini-tial-izer method for a vec-tor of \OT1/cmtt/m/ n/10 I2OP \OT1/cmr/m/n/10 struc-tures. We set \OT1/cmtt/m/n/10 base[i].value0 = base[i].value1 )) (../../Utilities/doc/drivers.tex [104]) (../../ZV/doc/intro.tex [105] Chapter 14. ) (../../ZV/doc/dataStructure.tex) (../../ZV/doc/proto.tex Overfull \hbox (5.16449pt too wide) in paragraph at lines 23--1 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 max size\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nowned \OT1/cmr/m/n/10 and \OT1/cmtt/m/n /10 vec \OT1/cmr/m/n/10 fields need never be ac-cessed di-rectly --- see the \O T1/cmtt/m/n/10 ZV[]size()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 ZV[]maxsize()\OT1/c mr/m/n/10 , [106] [107] [108] [109] [110]) (../../ZV/doc/drivers.tex [111])) (./partOrder.tex [112] [113] (../../BKL/doc/intro.tex Chapter 15. ) (../../BKL/doc/dataStructure.tex [114]) (../../BKL/doc/proto.tex [115] [116] [117]) (../../BPG/doc/intro.tex [118] Chapter 16. [119] [120]) (../../BPG/doc/dataStructure.tex) (../../BPG/doc/proto.tex [121] [122] Overfull \hbox (66.05252pt too wide) in paragraph at lines 260--262 []\OT1/cmr/m/n/10 This method has the same func-tion-al-ity, call-ing se-quence and re-turned val-ues as the pre-ced-ing \OT1/cmtt/m/n/10 BPG[]DMdecomposition () [123]) (../../BPG/doc/drivers.tex [124]) (../../DSTree/doc/intro.tex [125] Chapter 17. ) (../../DSTree/doc/dataStructure.tex) (../../DSTree/doc/proto.tex [126] [127] [128] [129] Overfull \hbox (21.79298pt too wide) in paragraph at lines 428--437 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 DSTree \OT1/cmr/m/n/10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 DS Tree[]writeStats() ) (../../DSTree/doc/drivers.tex [130]) (../../EGraph/doc/intro.tex [131] Chapter 18. ) (../../EGraph/doc/dataStructure.tex) (../../EGraph/doc/proto.tex [132] [133] Overfull \hbox (27.34856pt too wide) in paragraph at lines 264--274 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 EGraph \OT1/cmr/m/n/10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 E Graph[]writeStats() Overfull \hbox (59.98613pt too wide) in paragraph at lines 264--274 \OT1/cmr/m/n/10 is called to write out the header and statis-tics. Then the \OT 1/cmtt/m/n/10 adjIVL \OT1/cmr/m/n/10 ob-ject is writ-ten out us-ing \OT1/cmtt/m /n/10 IVL[]writeForHumanEye()\OT1/cmr/m/n/10 . [134]) (../../EGraph/doc/drivers.tex [135]) (../../ETree/doc/intro.tex [136] Chapter 19. ) (../../ETree/doc/dataStructure.tex) (../../ETree/doc/proto.tex [137] Overfull \hbox (10.32721pt too wide) in paragraph at lines 32--35 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields are set to de-fault val-ues: \OT1/cmtt/m/n/10 nfront = nvtx = 0\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 t ree = nodwghtsIV [138] [139] [140] Overfull \hbox (6.7411pt too wide) in paragraph at lines 354--354 []\OT1/cmtt/m/n/10 int ETree_initFromSubtree ( ETree *subtree, IV *nodeidsIV, ETree *etree, IV *vtxIV ) ;[] Overfull \hbox (9.87708pt too wide) in paragraph at lines 468--475 \OT1/cmr/m/n/10 (1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 2)$ blocks dur-ing a fac-t or-iza-tion. The \OT1/cmtt/m/n/10 type \OT1/cmr/m/n/10 pa-ram-e-ter can be one of \OT1/cmtt/m/n/10 SPOOLES[]REAL \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[] COMPLEX\OT1/cmr/m/n/10 . [141] Overfull \hbox (22.49097pt too wide) in paragraph at lines 565--565 []\OT1/cmtt/m/n/10 ETree * ETree_spliceTwoEtrees ( ETree *etree0, Graph *graph , IV *mapIV, ETree *etree1 ) ;[] [142] [143] [144] [145] [146] Overfull \hbox (14.4601pt too wide) in paragraph at lines 1095--1102 \OT1/cmr/m/n/10 us-ing \OT1/cmtt/m/n/10 ETree[]mergeFrontsOne() \OT1/cmr/m/n/10 fol-lowed by \OT1/cmtt/m/n/10 ETree[]mergeFrontsAll()\OT1/cmr/m/n/10 . See the driver pro-grams \OT1/cmtt/m/n/10 testTransform [147] [148] [149] [150] Overfull \hbox (30.76532pt too wide) in paragraph at lines 1493--1501 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 ETree \OT1/cmr/m/n/10 ob-ject to a file in a read-able for-mat. Oth-er-wise, the method \OT1/cmtt/m/n /10 ETree[]writeStats() ) (../../ETree/doc/drivers.tex [151] [152] [153] Overfull \hbox (31.12537pt too wide) in paragraph at lines 320--328 \OT1/cmtt/m/n/10 outETreeFile \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 none \OT1/cmr /m/n/10 then the \OT1/cmtt/m/n/10 ETree \OT1/cmr/m/n/10 ob-ject is not writ-ten to a file. Oth-er-wise, the \OT1/cmtt/m/n/10 ETree[]writeToFile() [154] psfig: searching ../../ETree/doc/FS1.eps for bounding box psfig: including ../../ETree/doc/FS1.eps psfig: searching ../../ETree/doc/FS2.eps for bounding box psfig: including ../../ETree/doc/FS2.eps [155] [156] [157] psfig: searching ../../ETree/doc/GRD7x7x7_nzA.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzA.eps psfig: searching ../../ETree/doc/GRD7x7x7_nzF.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzF.eps psfig: searching ../../ETree/doc/GRD7x7x7_forwops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_forwops.eps psfig: searching ../../ETree/doc/GRD7x7x7_backops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_backops.eps psfig: searching ../../ETree/doc/workingStorage.eps for bounding box psfig: including ../../ETree/doc/workingStorage.eps [158] [159]) (../../GPart/doc/intro.tex [160] [161] Chapter 20. ) (../../GPart/doc/dataStructure.tex [162] [163]) (../../GPart/doc/proto.tex [164] [165] [166] [167] [168] [169]) (../../GPart/doc/drivers.tex [170] [171] [172]) (../../Graph/doc/intro.tex [173] Chapter 21. [174]) (../../Graph/doc/dataStructure.tex) (../../Graph/doc/proto.tex [175] [176] [177] [178] [179] Overfull \hbox (11.29308pt too wide) in paragraph at lines 531--536 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 Graph \OT1/cmr/m/n/10 o b-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Gra ph[]writeStats() ) (../../Graph/doc/drivers.tex [180] [181] Overfull \hbox (27.02443pt too wide) in paragraph at lines 200--204 []\OT1/cmr/m/n/10 This driver pro-gram reads in a \OT1/cmtt/m/n/10 Graph \OT1/c mr/m/n/10 ob-ject and tests whether it is sym-met-ric us-ing the \OT1/cmtt/m/n/ 10 Graph[]isSymmetric() psfig: searching ../../Graph/doc/rad1.eps for bounding box psfig: including ../../Graph/doc/rad1.eps psfig: searching ../../Graph/doc/rad2.eps for bounding box psfig: including ../../Graph/doc/rad2.eps [182]) (../../MSMD/doc/intro.tex [183] Chapter 22. [184]) (../../MSMD/doc/dataStructure.tex [185] [186] [187]) (../../MSMD/doc/proto.tex [188] [189] [190] Overfull \hbox (39.69234pt too wide) in paragraph at lines 336--339 []\OT1/cmr/m/n/10 This method cleans the nodes in the reach set by call-ing \OT 1/cmtt/m/n/10 MSMD[]cleanSubtreeList() \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 MSM D[]clearEdgeList()\OT1/cmr/m/n/10 . [191]) (../../MSMD/doc/drivers.tex [192] Overfull \hbox (2.44388pt too wide) in paragraph at lines 72--75 []\OT1/cmtt/m/n/10 stepType == 0 \OT1/cmr/m/n/10 --- one ver-tex elim-i-nated a t each step, like YSMP, and QMD from SPARSPAK. [193]) (../../Network/doc/intro.tex [194] Chapter 23. [195]) (../../Network/doc/dataStructure.tex [196]) (../../Network/doc/proto.tex [197] [198] Overfull \hbox (10.01547pt too wide) in paragraph at lines 232--238 []\OT1/cmr/m/n/10 This method writes the net-work to a file in a hu-man read-ab le for-mat. The method \OT1/cmtt/m/n/10 Network[]writeStats() ) (../../SolveMap/doc/intro.tex [199] Chapter 24. ) (../../SolveMap/doc/dataStructure.tex) (../../SolveMap/doc/proto.tex [200] [201] Overfull \hbox (1.13116pt too wide) in paragraph at lines 223--230 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 solvemap \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or \OT1/cmtt/m/n/10 s ymmetryflag \OT1/cmr/m/n/10 is in-valid, or \OT1/cmtt/m/n/10 nfront\OT1/cmr/m/n /10 , \OT1/cmtt/m/n/10 nblockUpper\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 nblockLowe r [202] [203] Overfull \hbox (43.46613pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 mapidsUpper[*]\OT1/cmr/m/n/10 , and if \OT 1/cmtt/m/n/10 symmetryflag = SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10 , fol-lowed b y \OT1/cmtt/m/n/10 rowidsLower[*]\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 colidsLower [*] [204] Overfull \hbox (48.40392pt too wide) in paragraph at lines 508--513 []\OT1/cmr/m/n/10 This method writes an \OT1/cmtt/m/n/10 SolveMap \OT1/cmr/m/n/ 10 ob-ject to a file in an eas-ily read-able for-mat. The method \OT1/cmtt/m/n/ 10 SolveMap[]writeStats() ) (../../Tree/doc/intro.tex [205] Chapter 25. ) (../../Tree/doc/dataStructure.tex) (../../Tree/doc/proto.tex [206] [207] [208] [209] [210] [211] [212] Overfull \hbox (0.79317pt too wide) in paragraph at lines 830--837 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 Perm \OT1/cmr/m/n/10 ob -ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 Tree []writeStats() [213]) (../../Tree/doc/drivers.tex psfig: searching ../../Tree/doc/R2D100HC.eps for bounding box psfig: including ../../Tree/doc/R2D100HC.eps psfig: searching ../../Tree/doc/R2D100DC.eps for bounding box psfig: including ../../Tree/doc/R2D100DC.eps psfig: searching ../../Tree/doc/R2D100HP.eps for bounding box psfig: including ../../Tree/doc/R2D100HP.eps psfig: searching ../../Tree/doc/R2D100DP.eps for bounding box psfig: including ../../Tree/doc/R2D100DP.eps )) (./partNumeric.tex [214] [215] [216] (../../Chv/doc/intro.tex Chapter 26. psfig: searching ../../Chv/doc/simple.eps for bounding box psfig: including ../../Chv/doc/simple.eps [217] psfig: searching ../../Chv/doc/simple2.eps for bounding box psfig: including ../../Chv/doc/simple2.eps ) (../../Chv/doc/dataStructure.tex [218]) (../../Chv/doc/proto.tex [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229]) (../../Chv/doc/drivers.tex [230] Overfull \hbox (28.32214pt too wide) in paragraph at lines 99--107 \OT1/cmr/m/n/10 been fac-tored to store the en-tries into dense $\OML/cmm/m/it/ 10 L$ \OT1/cmr/m/n/10 and $\OML/cmm/m/it/10 U$ \OT1/cmr/m/n/10 sub-ma-tri-ces. Use the script file \OT1/cmtt/m/n/10 do[]copyEntriesToVector [231] [232] [233] Overfull \hbox (47.11063pt too wide) in paragraph at lines 406--415 []\OT1/cmr/m/n/10 This driver pro-gram tests three meth-ods: \OT1/cmtt/m/n/10 C hv[]swapRowsAndColumns()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 Chv[]swapRows() \OT1 /cmr/m/n/10 and \OT1/cmtt/m/n/10 Chv[]swapColumns()\OT1/cmr/m/n/10 . [234]) (../../ChvList/doc/intro.tex [235] Chapter 27. ) (../../ChvList/doc/dataStructure.tex [236]) (../../ChvList/doc/proto.tex [237]) (../../ChvManager/doc/intro.tex [238] Chapter 28. ) (../../ChvManager/doc/dataStructure.tex [239]) (../../ChvManager/doc/proto.tex [240]) (../../DenseMtx/doc/intro.tex [241] Chapter 29. ) (../../DenseMtx/doc/dataStructure.tex) (../../DenseMtx/doc/proto.tex [242] [243] [244] [245] [246] [247] [248]) (../../FrontMtx/doc/intro.tex [249] Chapter 30. psfig: searching ../../FrontMtx/doc/simple.eps for bounding box psfig: including ../../FrontMtx/doc/simple.eps [250] [251]) (../../FrontMtx/doc/dataStructure.tex [252] [253]) (../../FrontMtx/doc/proto.tex [254] [255] [256] [257] Overfull \hbox (13.35185pt too wide) in paragraph at lines 368--376 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 frontmtx\ OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 frontETree \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/1 0 symbfacIVL \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if \O T1/cmtt/m/n/10 type\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetryflag\OT1/cmr/m/n/ 10 , \OT1/cmtt/m/n/10 sparsityflag [258] Overfull \hbox (24.57285pt too wide) in paragraph at lines 503--508 \OT1/cmr/m/n/10 gre-gate fronts and help syn-chro-nize the fac-tor-iza-tion. Th ere is an anal-o-gous \OT1/cmtt/m/n/10 FrontMtx[]MPI[]aggregateList() [259] [260] [261] Overfull \hbox (1.49115pt too wide) in paragraph at lines 765--765 [] \OT1/cmtt/m/n/10 ChvManager *chvmanager, int msglvl, FILE *msgFile ) ;[] [262] [263] [264] [265] [266] Overfull \hbox (42.7928pt too wide) in paragraph at lines 1297--1302 []\OT1/cmr/m/n/10 This method writes a \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/1 0 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/10 FrontMtx[]writeStats() ) (../../FrontMtx/doc/drivers.tex [267]) (../../ILUMtx/doc/intro.tex [268] Chapter 31. ) (../../ILUMtx/doc/dataStructure.tex Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . [269]) (../../ILUMtx/doc/proto.tex Overfull \hbox (11.74596pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns = 0\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [270] [271]) (../../ILUMtx/doc/drivers.tex [272]) (../../InpMtx/doc/intro.tex [273] Chapter 32. [274]) (../../InpMtx/doc/dataStructure.tex [275] Overfull \hbox (10.7373pt too wide) in paragraph at lines 74--79 []\OT1/cmtt/m/n/10 int maxnvector \OT1/cmr/m/n/10 -- present max-i-mum num-ber of vec-tors. This quan-tity is ini-tial-ized by the \OT1/cmtt/m/n/10 InpMtx[]in it() [276]) (../../InpMtx/doc/proto.tex [277] [278] [279] Overfull \hbox (9.61465pt too wide) in paragraph at lines 390--400 []\OT1/cmr/m/n/10 This method changes the co-or-di-nate type. If $[] = []$, the pro-gram re-turns. If $[] \OMS/cmtt/m/n/10 ^^U [280] [281] [282] Overfull \hbox (34.11732pt too wide) in paragraph at lines 734--745 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (6.7411pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector ( InpMtx *A, DenseMtx *Y, doub le alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_T ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_H ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] [283] Overfull \hbox (34.11732pt too wide) in paragraph at lines 787--798 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [284] Overfull \hbox (11.27731pt too wide) in paragraph at lines 964--972 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , Overfull \hbox (11.27731pt too wide) in paragraph at lines 980--988 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , [285] [286] [287] Overfull \hbox (13.68219pt too wide) in paragraph at lines 1411--1418 []\OT1/cmr/m/n/10 This method writes the ob-ject to a file suit-able for read-i ng by a hu-man. The method \OT1/cmtt/m/n/10 InpMtx[]writeStats() [288] Overfull \hbox (10.59344pt too wide) in paragraph at lines 1465--1471 \OT1/cmtt/m/n/10 readHB[]mat[]double() \OT1/cmr/m/n/10 from the Harwell-Boeing C IO rou-tines from NIST[], found in the \OT1/cmtt/m/n/10 misc/src/iohb.c ) (../../InpMtx/doc/drivers.tex [289] [290] [291] [292] psfig: searching ../../InpMtx/doc/BCSSTK23.eps for bounding box psfig: including ../../InpMtx/doc/BCSSTK23.eps [293] [294] [295]) (../../Iter/doc/intro.tex [296] Chapter 33. Overfull \hbox (5.20291pt too wide) in paragraph at lines 4--15 \OT1/cmtt/m/n/10 Iter \OT1/cmr/m/n/10 is com-posed of 5 Krylov space it-er-a-ti ve meth-ods, PCG (Pre-con-di-tioned Con-ju-gate Gra-di-ents), BiCGStab, ) (../../Iter/doc/dataStructure.tex) (../../Iter/doc/proto.tex [297] [298] [299] [300] [301]) (../../Iter/doc/drivers.tex [302] [303] [304] [305]) (../../PatchAndGoInfo/doc/intro.tex [306] Chapter 34. ) (../../PatchAndGoInfo/doc/dataStructure.tex [307] Overfull \hbox (58.84337pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 2 \OT1/cmr/m/n/10 --- used with struc-tural anal-y-sis ma-tr i-ces, if $\OMS/cmtt/m/n/10 j\OML/cmm/m/it/10 A[]\OMS/cmtt/m/n/10 j ^^T []$ \OT 1/cmr/m/n/10 then set $\OML/cmm/m/it/10 A[] \OT1/cmr/m/n/10 = [] \OMS/cmtt/m/n/ 10 ^^A []f\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; [][]\OMS/cmtt/m/n/10 fj\OML/cmm/m /it/10 A[]\OMS/cmtt/m/n/10 j\OML/cmm/m/it/10 ; \OMS/cmtt/m/n/10 j\OML/cmm/m/it/ 10 A[]\OMS/cmtt/m/n/10 jgg$ ) (../../PatchAndGoInfo/doc/proto.tex Overfull \hbox (3.66177pt too wide) in paragraph at lines 5--7 \OT1/cmr/m/n/10 This sec-tion con-tains brief de-scrip-tions in-clud-ing pro-to -types of all meth-ods that be-long to the \OT1/cmtt/m/n/10 PatchAndGoInfo [308]) (../../Pencil/doc/intro.tex [309] Chapter 35. ) (../../Pencil/doc/dataStructure.tex) (../../Pencil/doc/proto.tex [310] [311]) (../../SemiImplMtx/doc/intro.tex [312] Chapter 36. ) (../../SemiImplMtx/doc/dataStructure.tex [313] Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . ) (../../SemiImplMtx/doc/proto.tex Overfull \hbox (7.96838pt too wide) in paragraph at lines 32--41 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns \OT1/cmr/m/n/10 = 0, \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [314] [315]) (../../SemiImplMtx/doc/drivers.tex [316] Overfull \hbox (2.85498pt too wide) in paragraph at lines 111--114 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject is read from the \OT1/cmtt/m/n/10 inFrontMtxFile \OT1/cmr/m/n/10 file, which must be o f the form \OT1/cmtt/m/n/10 *.frontmtxf ) (../../SubMtx/doc/intro.tex [317] Chapter 37. [318]) (../../SubMtx/doc/dataStructure.tex [319]) (../../SubMtx/doc/proto.tex Overfull \hbox (2.80563pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10 The struc-ture's fields are set to de-fault val-ues: \OT1/cmt t/m/n/10 type \OT1/cmr/m/n/10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 = \OT1/cmtt/m/n/10 DENSEMTX[]DENSE[]COLU MNS\OT1/cmr/m/n/10 , [320] [321] Overfull \hbox (36.46364pt too wide) in paragraph at lines 223--237 \OT1/cmtt/m/n/10 [firstlocs[irow],lastlocs[irow]] \OT1/cmr/m/n/10 when $[] \OMS /cmtt/m/n/10 ^^U \OT1/cmr/m/n/10 0$ and $[] \OMS/cmtt/m/n/10 ^^T []$\OT1/cmr/m/ n/10 . [322] [323] [324] [325] [326] [327] Overfull \hbox (38.45969pt too wide) in paragraph at lines 911--917 []\OT1/cmr/m/n/10 This method writes out a \OT1/cmtt/m/n/10 SubMtx \OT1/cmr/m/n /10 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n/1 0 SubMtx[]writeStats() ) (../../SubMtx/doc/drivers.tex [328] Underfull \hbox (badness 10000) in paragraph at lines 97--106 \OT1/cmr/m/n/10 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]SUBROWS\OT1/cmr/m/n/10 ), 6 (\ OT1/cmtt/m/n/10 SUBMTX[]DENSE[]SUBCOLUMNS\OT1/cmr/m/n/10 ), 7 (\OT1/cmtt/m/n/10 SUBMTX[]DIAGONAL\OT1/cmr/m/n/10 ), [329] Overfull \hbox (65.22816pt too wide) in paragraph at lines 228--234 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) [330] Overfull \hbox (65.22816pt too wide) in paragraph at lines 279--285 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) Overfull \hbox (65.22816pt too wide) in paragraph at lines 331--337 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) [331] Overfull \hbox (65.22816pt too wide) in paragraph at lines 381--387 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 mode \OT1/cmr/m/n/10 pa-ram-e-ter must b e one of 0 (\OT1/cmtt/m/n/10 SUBMTX[]DENSE[]ROWS\OT1/cmr/m/n/10 ), 1 (\OT1/cmtt /m/n/10 SUBMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10 ), 2 (\OT1/cmtt/m/n/10 SUBMTX[]SP ARSE[]ROWS\OT1/cmr/m/n/10 ) ) (../../SubMtxList/doc/intro.tex [332] Chapter 38. ) (../../SubMtxList/doc/dataStructure.tex [333]) (../../SubMtxList/doc/proto.tex [334]) (../../SubMtxManager/doc/intro.tex [335] Chapter 39. ) (../../SubMtxManager/doc/dataStructure.tex [336]) (../../SubMtxManager/doc/proto.tex [337]) (../../SymbFac/doc/intro.tex [338] Chapter 40. ) (../../SymbFac/doc/dataStructure.tex) (../../SymbFac/doc/proto.tex [339] Overfull \hbox (10.96967pt too wide) in paragraph at lines 54--65 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 etree \OT 1/cmr/m/n/10 or \OT1/cmtt/m/n/10 inpmtx \OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NUL L\OT1/cmr/m/n/10 , or if the co-or-di-nate type of \OT1/cmtt/m/n/10 inpmtx \OT1 /cmr/m/n/10 is not \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , ) (../../SymbFac/doc/drivers.tex [340])) (./partMisc.tex [341] [342] (../../misc/doc/intro.tex Chapter 41. ) (../../misc/doc/proto.tex [343] [344] [345] [346]) (../../misc/doc/drivers.tex [347] [348] psfig: searching ../../misc/doc/R2D100notags.eps for bounding box psfig: including ../../misc/doc/R2D100notags.eps psfig: searching ../../misc/doc/R2D100fishnet.eps for bounding box psfig: including ../../misc/doc/R2D100fishnet.eps [349] [350] [351] [352] [353] [354])) (./partMT.tex [355] [356] (../../MT/doc/intro.tex Chapter 42. ) (../../MT/doc/dataStructure.tex) (../../MT/doc/proto.tex [357] Overfull \hbox (63.2698pt too wide) in paragraph at lines 11--27 \OT1/cmr/m/n/10 There are five meth-ods to mul-ti-ply a vec-tor times a dense m a-trix. The first three meth-ods, called \OT1/cmtt/m/n/10 InpMtx[]MT[]nonsym[]m mm*()\OT1/cmr/m/n/10 , Overfull \hbox (34.11732pt too wide) in paragraph at lines 64--75 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [358] Overfull \hbox (34.11732pt too wide) in paragraph at lines 101--112 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (34.11732pt too wide) in paragraph at lines 130--139 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [359] [360]) (../../MT/doc/drivers.tex [361] [362] [363] [364] [365])) (./partMPI.tex [366] [367] (../../MPI/doc/intro.tex Chapter 43. ) (../../MPI/doc/dataStructure.tex Overfull \hbox (0.87425pt too wide) in paragraph at lines 30--34 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 MatMulInfo \OT1/cmr/m/n/10 ob-ject store s all the nec-es-sary in-for-ma-tion to make this hap-pen. There is one \OT1/cm tt/m/n/10 MatMulInfo [368]) (../../MPI/doc/proto.tex Overfull \hbox (59.838pt too wide) in paragraph at lines 97--1 []\OT1/cmr/m/n/10 See the meth-ods \OT1/cmtt/m/n/10 MatMul[]MPI[]setup()\OT1/cm r/m/n/10 , \OT1/cmtt/m/n/10 MatMul[]setLocalIndices()\OT1/cmr/m/n/10 , \OT1/cmt t/m/n/10 MatMul[]setGlobalIndices()\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 MatMul[]M PI[]mmm() [369] [370] Overfull \hbox (31.97972pt too wide) in paragraph at lines 249--256 \OT1/cmr/m/n/10 dis-tributed matrix-matrix mul-ti-ply. The gather op-er-a-tion $\OML/cmm/m/it/10 X[] \OMS/cmtt/m/n/10 \OML/cmm/m/it/10 X$ \OT1/cmr/m/n/10 is per-formed by \OT1/cmtt/m/n/10 DenseMtx[]MPI[]gatherRows()\OT1/cmr/m/n/10 , [371] [372] [373] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 []\OT1/cmtt/m/n/10 void FrontMtx_MPI_permuteUpperAdj ( FrontMtx *frontmtx, IV *frontOwnersIV, int stats[],[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 [] \OT1/cmtt/m/n/10 int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 []\OT1/cmtt/m/n/10 void FrontMtx_MPI_permuteLowerAdj ( FrontMtx *frontmtx, IV *frontOwnersIV, int stats[],[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 517--517 [] \OT1/cmtt/m/n/10 int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] [374] [375] [376] [377] [378] Overfull \hbox (11.99106pt too wide) in paragraph at lines 981--981 []\OT1/cmtt/m/n/10 void * makeSendRecvIVLs ( IV *supportedIV, IV *globalmapIV, IVL *sendIVL, IVL *recvIVL,[] Overfull \hbox (11.99106pt too wide) in paragraph at lines 981--981 [] \OT1/cmtt/m/n/10 int stats[], int msglvl, FILE *msgFile, int firsttag, MPI_Comm comm ) ;[] ) (../../MPI/doc/drivers.tex [379] [380] [381] [382] Overfull \hbox (31.23914pt too wide) in paragraph at lines 409--426 []\OT1/cmr/m/n/10 This driver pro-gram tests the dis-tributed \OT1/cmtt/m/n/10 IVL[]MPI[]alltoall() \OT1/cmr/m/n/10 method. This is used by the \OT1/cmtt/m/n/ 10 makeSendRecvIVLs [383] [384] [385] [386])) (./main.bbl [387] [388]) (./main.ind [389] [390] [391] [392] [393] [394] [395] [396] [397] [398] [399] [400] [401] [402] [403] [404]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (405 pages, 1607980 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> ReferenceManual.ps . [1] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155<../../ETree/doc/FS1.eps> <../../ETree/doc/FS2.eps>] [156] [157] [158 <../../ETree/doc/workingStorage.eps>] [159<../../ETree/doc/GRD7x7x7_nzA.eps> <../../ETree/doc/GRD7x7x7_nzF.eps><../../ETree/doc/GRD7x7x7_forwops.eps> <../../ETree/doc/GRD7x7x7_backops.eps>] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183<../../Graph/doc/rad1.eps> <../../Graph/doc/rad2.eps>] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215 <../../Tree/doc/R2D100HC.eps><../../Tree/doc/R2D100DC.eps> <../../Tree/doc/R2D100HP.eps><../../Tree/doc/R2D100DP.eps>] [216] [217 <../../Chv/doc/simple.eps>] [218<../../Chv/doc/simple2.eps>] [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] [245] [246] [247] [248] [249] [250] [251<../../FrontMtx/doc/simple.eps>] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] [294<../../InpMtx/doc/BCSSTK23.eps>] [295] [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350 <../../misc/doc/R2D100notags.eps>] [351<../../misc/doc/R2D100fishnet.eps>] [352] [353] [354] [355] [356] [357] [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] [388] [389] [390] [391] [392] [393] [394] [395] [396] [397] [398] [399] [400] [401] [402] [403] [404] for module in A2 BKL BPG Chv ChvList ChvManager Coords DSTree DV \ DenseMtx Drand EGraph ETree FrontMtx GPart Graph I2Ohash IIheap \ IV IVL Ideq InpMtx Lock MSMD Network PatchAndGoInfo Pencil Perm \ SemiImplMtx SolveMap SubMtx SubMtxList SubMtxManager SymbFac Tree \ Utilities ZV misc MPI MT Eigen LinSol; do \ (cd $module/doc; \ latex main; \ latex main; \ latex main; \ dvips main -o $module.ps); \ done This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) Overfull \hbox (22.05931pt too wide) in paragraph at lines 44--54 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 A2[]copyEntriesToVector() \OT1/cmr/m/n/10 method uses the fol-low-ing con-stants: \OT1/cmtt/m/n/10 A2[]STRICT[]LOWER\OT1/ cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]LOWER\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]D IAGONAL\OT1/cmr/m/n/10 , ) (./proto.tex [1] [2] [3] Overfull \hbox (9.5478pt too wide) in paragraph at lines 290--295 \OT1/cmr/m/n/10 Note, \OT1/cmtt/m/n/10 firstrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/ 10 lastrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 firstcol \OT1/cmr/m/n/10 and \OT1/ cmtt/m/n/10 lastcol \OT1/cmr/m/n/10 must sat-isfy \OT1/cmtt/m/n/10 0 <= firstro w <= lastrow < mtxB->n1 [4] [5] [6] [7] Overfull \hbox (0.273pt too wide) in paragraph at lines 776--779 []\OT1/cmr/m/n/10 This method fills the ma-trix with ran-dom num-bers taken fro m a uni-form dis-tri-bu-tion on \OT1/cmtt/m/n/10 [lower,upper] [8] [9]) (./drivers.tex [10]) (./main.ind [11] [12]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (12 pages, 43016 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) Overfull \hbox (22.05931pt too wide) in paragraph at lines 44--54 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 A2[]copyEntriesToVector() \OT1/cmr/m/n/10 method uses the fol-low-ing con-stants: \OT1/cmtt/m/n/10 A2[]STRICT[]LOWER\OT1/ cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]LOWER\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]D IAGONAL\OT1/cmr/m/n/10 , ) (./proto.tex [1] [2] [3] Overfull \hbox (9.5478pt too wide) in paragraph at lines 290--295 \OT1/cmr/m/n/10 Note, \OT1/cmtt/m/n/10 firstrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/ 10 lastrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 firstcol \OT1/cmr/m/n/10 and \OT1/ cmtt/m/n/10 lastcol \OT1/cmr/m/n/10 must sat-isfy \OT1/cmtt/m/n/10 0 <= firstro w <= lastrow < mtxB->n1 [4] [5] [6] [7] Overfull \hbox (0.273pt too wide) in paragraph at lines 776--779 []\OT1/cmr/m/n/10 This method fills the ma-trix with ran-dom num-bers taken fro m a uni-form dis-tri-bu-tion on \OT1/cmtt/m/n/10 [lower,upper] [8] [9]) (./drivers.tex [10]) (./main.ind [11] [12]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (12 pages, 43016 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) Overfull \hbox (22.05931pt too wide) in paragraph at lines 44--54 \OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 A2[]copyEntriesToVector() \OT1/cmr/m/n/10 method uses the fol-low-ing con-stants: \OT1/cmtt/m/n/10 A2[]STRICT[]LOWER\OT1/ cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]LOWER\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 A2[]D IAGONAL\OT1/cmr/m/n/10 , ) (./proto.tex [1] [2] [3] Overfull \hbox (9.5478pt too wide) in paragraph at lines 290--295 \OT1/cmr/m/n/10 Note, \OT1/cmtt/m/n/10 firstrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/ 10 lastrow\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 firstcol \OT1/cmr/m/n/10 and \OT1/ cmtt/m/n/10 lastcol \OT1/cmr/m/n/10 must sat-isfy \OT1/cmtt/m/n/10 0 <= firstro w <= lastrow < mtxB->n1 [4] [5] [6] [7] Overfull \hbox (0.273pt too wide) in paragraph at lines 776--779 []\OT1/cmr/m/n/10 This method fills the ma-trix with ran-dom num-bers taken fro m a uni-form dis-tri-bu-tion on \OT1/cmtt/m/n/10 [lower,upper] [8] [9]) (./drivers.tex [10]) (./main.ind [11] [12]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (12 pages, 43016 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> A2.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex Overfull \hbox (15.59521pt too wide) in paragraph at lines 46--50 \OT1/cmr/m/n/10.95 tors. It then fills the struc-ture's fields with de-fault va l-ues with a call to \OT1/cmtt/m/n/10.95 BKL[]setDefaultFields()\OT1/cmr/m/n/10 .95 . [2] [3] Overfull \hbox (34.76115pt too wide) in paragraph at lines 231--231 []\OT1/cmtt/m/n/10.95 void BKL_evalgain ( BKL *bkl, int dom, int *pdeltaS, int *pdeltaB, int *pdeltaW ) ;[] [4]) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 16692 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex Overfull \hbox (15.59521pt too wide) in paragraph at lines 46--50 \OT1/cmr/m/n/10.95 tors. It then fills the struc-ture's fields with de-fault va l-ues with a call to \OT1/cmtt/m/n/10.95 BKL[]setDefaultFields()\OT1/cmr/m/n/10 .95 . [2] [3] Overfull \hbox (34.76115pt too wide) in paragraph at lines 231--231 []\OT1/cmtt/m/n/10.95 void BKL_evalgain ( BKL *bkl, int dom, int *pdeltaS, int *pdeltaB, int *pdeltaW ) ;[] [4]) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 16692 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex Overfull \hbox (15.59521pt too wide) in paragraph at lines 46--50 \OT1/cmr/m/n/10.95 tors. It then fills the struc-ture's fields with de-fault va l-ues with a call to \OT1/cmtt/m/n/10.95 BKL[]setDefaultFields()\OT1/cmr/m/n/10 .95 . [2] [3] Overfull \hbox (34.76115pt too wide) in paragraph at lines 231--231 []\OT1/cmtt/m/n/10.95 void BKL_evalgain ( BKL *bkl, int dom, int *pdeltaS, int *pdeltaB, int *pdeltaW ) ;[] [4]) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 16692 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> BKL.ps . [1] [2] [3] [4] [5] [6] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 34. LaTeX Warning: Citation `ash98-maxflow' on page 1 undefined on input line 46. [1] LaTeX Warning: Citation `ash98-maxflow' on page 2 undefined on input line 83. [2]) (./dataStructure.tex) (./proto.tex [3] [4] Overfull \hbox (66.05252pt too wide) in paragraph at lines 260--262 []\OT1/cmr/m/n/10 This method has the same func-tion-al-ity, call-ing se-quence and re-turned val-ues as the pre-ced-ing \OT1/cmtt/m/n/10 BPG[]DMdecomposition () [5]) (./drivers.tex [6]) (./main.ind [7] [8]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 33024 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 34. LaTeX Warning: Citation `ash98-maxflow' on page 1 undefined on input line 46. [1] LaTeX Warning: Citation `ash98-maxflow' on page 2 undefined on input line 83. [2]) (./dataStructure.tex) (./proto.tex [3] [4] Overfull \hbox (66.05252pt too wide) in paragraph at lines 260--262 []\OT1/cmr/m/n/10 This method has the same func-tion-al-ity, call-ing se-quence and re-turned val-ues as the pre-ced-ing \OT1/cmtt/m/n/10 BPG[]DMdecomposition () [5]) (./drivers.tex [6]) (./main.ind [7] [8]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 33024 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 34. LaTeX Warning: Citation `ash98-maxflow' on page 1 undefined on input line 46. [1] LaTeX Warning: Citation `ash98-maxflow' on page 2 undefined on input line 83. [2]) (./dataStructure.tex) (./proto.tex [3] [4] Overfull \hbox (66.05252pt too wide) in paragraph at lines 260--262 []\OT1/cmr/m/n/10 This method has the same func-tion-al-ity, call-ing se-quence and re-turned val-ues as the pre-ced-ing \OT1/cmtt/m/n/10 BPG[]DMdecomposition () [5]) (./drivers.tex [6]) (./main.ind [7] [8]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 33024 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> BPG.ps . [1] [2] [3] [4] [5] [6] [7] [8] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. psfig: searching ../../Chv/doc/simple.eps for bounding box psfig: including ../../Chv/doc/simple.eps [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 61. Overfull \hbox (7.47354pt too wide) in paragraph at lines 63--66 []\OT1/cmr/m/n/10.95 Assemble any post-poned data from its chil-dren fronts. (S ee the \OT1/cmtt/m/n/10.95 Chv[]assemblePostponedData() Overfull \hbox (1.0263pt too wide) in paragraph at lines 66--68 []\OT1/cmr/m/n/10.95 Compute the fac-tor-iza-tion of the com-pletely as-sem-ble d front. (See the \OT1/cmtt/m/n/10.95 Chv[]factor() \OT1/cmr/m/n/10.95 method.) psfig: searching ../../Chv/doc/simple2.eps for bounding box psfig: including ../../Chv/doc/simple2.eps [2]) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [3]) (./proto.tex [4] [5] [6] Overfull \hbox (29.01247pt too wide) in paragraph at lines 324--324 []\OT1/cmtt/m/n/10.95 void Chv_init( Chv *chv, int id, int nD, int nL, int nU, int type, int symflag ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 347--347 []\OT1/cmtt/m/n/10.95 void Chv_initWithPointers ( Chv *chv, int id, int nD, in t nL, int nU, int type,[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 347--347 [] \OT1/cmtt/m/n/10.95 int symflag, int *rowind, int *colin d, double *entries ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 390--390 []\OT1/cmtt/m/n/10.95 int Chv_maxabsInDiagonal11 ( Chv *chv, int mark[], int t ag, double *pmaxval ) ;[] [7] [8] [9] [10] Overfull \hbox (0.26903pt too wide) in paragraph at lines 681--681 []\OT1/cmtt/m/n/10.95 int Chv_assemblePostponedData ( Chv *newchv, Chv *oldchv , Chv *firstchild ) ;[] [11] [12] Overfull \hbox (8.37198pt too wide) in paragraph at lines 921--925 []\OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 CHV[]BY[]ROWS\OT1/cmr/m/n/10.95 , the en-tries are stored by r ows and if \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10 .95 CHV[]BY[]COLUMNS\OT1/cmr/m/n/10.95 , [13] Overfull \hbox (8.37198pt too wide) in paragraph at lines 973--977 []\OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 CHV[]BY[]ROWS\OT1/cmr/m/n/10.95 , the en-tries are stored by r ows and if \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10 .95 CHV[]BY[]COLUMNS\OT1/cmr/m/n/10.95 , [14] [15] [16]) (./drivers.tex Overfull \hbox (4.80856pt too wide) in paragraph at lines 36--40 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [17] Overfull \hbox (4.80856pt too wide) in paragraph at lines 87--91 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 127--131 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [18] Overfull \hbox (4.80856pt too wide) in paragraph at lines 177--181 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [19] Overfull \hbox (4.80856pt too wide) in paragraph at lines 227--231 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 273--277 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (28.20038pt too wide) in paragraph at lines 287--301 []\OT1/cmr/m/n/10.95 This driver pro-gram tests the \OT1/cmtt/m/n/10.95 Chv[]ma xabsInRow()\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 Chv[]maxabsInRow11()\OT1/cm r/m/n/10.95 , \OT1/cmtt/m/n/10.95 Chv[]maxabsInColumn()\OT1/cmr/m/n/10.95 , [20] Overfull \hbox (4.80856pt too wide) in paragraph at lines 321--325 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 360--364 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 395--399 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [21] Overfull \hbox (4.80856pt too wide) in paragraph at lines 435--439 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 470--474 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [22]) (./main.ind [23] [24]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (24 pages, 86668 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. psfig: searching ../../Chv/doc/simple.eps for bounding box psfig: including ../../Chv/doc/simple.eps [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 61. Overfull \hbox (7.47354pt too wide) in paragraph at lines 63--66 []\OT1/cmr/m/n/10.95 Assemble any post-poned data from its chil-dren fronts. (S ee the \OT1/cmtt/m/n/10.95 Chv[]assemblePostponedData() Overfull \hbox (1.0263pt too wide) in paragraph at lines 66--68 []\OT1/cmr/m/n/10.95 Compute the fac-tor-iza-tion of the com-pletely as-sem-ble d front. (See the \OT1/cmtt/m/n/10.95 Chv[]factor() \OT1/cmr/m/n/10.95 method.) psfig: searching ../../Chv/doc/simple2.eps for bounding box psfig: including ../../Chv/doc/simple2.eps [2]) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [3]) (./proto.tex [4] [5] [6] Overfull \hbox (29.01247pt too wide) in paragraph at lines 324--324 []\OT1/cmtt/m/n/10.95 void Chv_init( Chv *chv, int id, int nD, int nL, int nU, int type, int symflag ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 347--347 []\OT1/cmtt/m/n/10.95 void Chv_initWithPointers ( Chv *chv, int id, int nD, in t nL, int nU, int type,[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 347--347 [] \OT1/cmtt/m/n/10.95 int symflag, int *rowind, int *colin d, double *entries ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 390--390 []\OT1/cmtt/m/n/10.95 int Chv_maxabsInDiagonal11 ( Chv *chv, int mark[], int t ag, double *pmaxval ) ;[] [7] [8] [9] [10] Overfull \hbox (0.26903pt too wide) in paragraph at lines 681--681 []\OT1/cmtt/m/n/10.95 int Chv_assemblePostponedData ( Chv *newchv, Chv *oldchv , Chv *firstchild ) ;[] [11] [12] Overfull \hbox (8.37198pt too wide) in paragraph at lines 921--925 []\OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 CHV[]BY[]ROWS\OT1/cmr/m/n/10.95 , the en-tries are stored by r ows and if \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10 .95 CHV[]BY[]COLUMNS\OT1/cmr/m/n/10.95 , [13] Overfull \hbox (8.37198pt too wide) in paragraph at lines 973--977 []\OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 CHV[]BY[]ROWS\OT1/cmr/m/n/10.95 , the en-tries are stored by r ows and if \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10 .95 CHV[]BY[]COLUMNS\OT1/cmr/m/n/10.95 , [14] [15] [16]) (./drivers.tex Overfull \hbox (4.80856pt too wide) in paragraph at lines 36--40 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [17] Overfull \hbox (4.80856pt too wide) in paragraph at lines 87--91 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 127--131 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [18] Overfull \hbox (4.80856pt too wide) in paragraph at lines 177--181 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [19] Overfull \hbox (4.80856pt too wide) in paragraph at lines 227--231 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 273--277 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (28.20038pt too wide) in paragraph at lines 287--301 []\OT1/cmr/m/n/10.95 This driver pro-gram tests the \OT1/cmtt/m/n/10.95 Chv[]ma xabsInRow()\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 Chv[]maxabsInRow11()\OT1/cm r/m/n/10.95 , \OT1/cmtt/m/n/10.95 Chv[]maxabsInColumn()\OT1/cmr/m/n/10.95 , [20] Overfull \hbox (4.80856pt too wide) in paragraph at lines 321--325 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 360--364 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 395--399 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [21] Overfull \hbox (4.80856pt too wide) in paragraph at lines 435--439 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 470--474 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [22]) (./main.ind [23] [24]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (24 pages, 86668 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. psfig: searching ../../Chv/doc/simple.eps for bounding box psfig: including ../../Chv/doc/simple.eps [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 61. Overfull \hbox (7.47354pt too wide) in paragraph at lines 63--66 []\OT1/cmr/m/n/10.95 Assemble any post-poned data from its chil-dren fronts. (S ee the \OT1/cmtt/m/n/10.95 Chv[]assemblePostponedData() Overfull \hbox (1.0263pt too wide) in paragraph at lines 66--68 []\OT1/cmr/m/n/10.95 Compute the fac-tor-iza-tion of the com-pletely as-sem-ble d front. (See the \OT1/cmtt/m/n/10.95 Chv[]factor() \OT1/cmr/m/n/10.95 method.) psfig: searching ../../Chv/doc/simple2.eps for bounding box psfig: including ../../Chv/doc/simple2.eps [2]) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [3]) (./proto.tex [4] [5] [6] Overfull \hbox (29.01247pt too wide) in paragraph at lines 324--324 []\OT1/cmtt/m/n/10.95 void Chv_init( Chv *chv, int id, int nD, int nL, int nU, int type, int symflag ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 347--347 []\OT1/cmtt/m/n/10.95 void Chv_initWithPointers ( Chv *chv, int id, int nD, in t nL, int nU, int type,[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 347--347 [] \OT1/cmtt/m/n/10.95 int symflag, int *rowind, int *colin d, double *entries ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 390--390 []\OT1/cmtt/m/n/10.95 int Chv_maxabsInDiagonal11 ( Chv *chv, int mark[], int t ag, double *pmaxval ) ;[] [7] [8] [9] [10] Overfull \hbox (0.26903pt too wide) in paragraph at lines 681--681 []\OT1/cmtt/m/n/10.95 int Chv_assemblePostponedData ( Chv *newchv, Chv *oldchv , Chv *firstchild ) ;[] [11] [12] Overfull \hbox (8.37198pt too wide) in paragraph at lines 921--925 []\OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 CHV[]BY[]ROWS\OT1/cmr/m/n/10.95 , the en-tries are stored by r ows and if \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10 .95 CHV[]BY[]COLUMNS\OT1/cmr/m/n/10.95 , [13] Overfull \hbox (8.37198pt too wide) in paragraph at lines 973--977 []\OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 CHV[]BY[]ROWS\OT1/cmr/m/n/10.95 , the en-tries are stored by r ows and if \OT1/cmtt/m/n/10.95 storeflag \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10 .95 CHV[]BY[]COLUMNS\OT1/cmr/m/n/10.95 , [14] [15] [16]) (./drivers.tex Overfull \hbox (4.80856pt too wide) in paragraph at lines 36--40 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [17] Overfull \hbox (4.80856pt too wide) in paragraph at lines 87--91 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 127--131 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [18] Overfull \hbox (4.80856pt too wide) in paragraph at lines 177--181 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [19] Overfull \hbox (4.80856pt too wide) in paragraph at lines 227--231 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 273--277 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (28.20038pt too wide) in paragraph at lines 287--301 []\OT1/cmr/m/n/10.95 This driver pro-gram tests the \OT1/cmtt/m/n/10.95 Chv[]ma xabsInRow()\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 Chv[]maxabsInRow11()\OT1/cm r/m/n/10.95 , \OT1/cmtt/m/n/10.95 Chv[]maxabsInColumn()\OT1/cmr/m/n/10.95 , [20] Overfull \hbox (4.80856pt too wide) in paragraph at lines 321--325 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 360--364 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 395--399 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [21] Overfull \hbox (4.80856pt too wide) in paragraph at lines 435--439 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN Overfull \hbox (4.80856pt too wide) in paragraph at lines 470--474 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 symflag \OT1/cmr/m/n/10.95 pa-ram- e-ter is the sym-me-try flag --- \OT1/cmtt/m/n/10.95 SPOOLES[]SYMMETRIC\OT1/cmr /m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN [22]) (./main.ind [23] [24]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (24 pages, 86668 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Chv.ps . [1 <../../Chv/doc/simple.eps>] [2<../../Chv/doc/simple2.eps>] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 11840 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 11840 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 11840 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> ChvList.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex Overfull \hbox (8.41794pt too wide) in paragraph at lines 14--19 []\OT1/cmtt/m/n/10.95 int mode \OT1/cmr/m/n/10.95 : be-hav-ior mode. When \OT1/ cmtt/m/n/10.95 mode = 0\OT1/cmr/m/n/10.95 , the ob-ject calls \OT1/cmtt/m/n/10. 95 SubMtx[]new() \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 SubMtx[]free() ) (./proto.tex Overfull \hbox (14.44592pt too wide) in paragraph at lines 33--46 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 mode\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nactive\OT1/cmr/m/n /10.95 , \OT1/cmtt/m/n/10.95 nbytesactive\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10. 95 nbytesrequested\OT1/cmr/m/n/10.95 , [2] [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11028 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex Overfull \hbox (8.41794pt too wide) in paragraph at lines 14--19 []\OT1/cmtt/m/n/10.95 int mode \OT1/cmr/m/n/10.95 : be-hav-ior mode. When \OT1/ cmtt/m/n/10.95 mode = 0\OT1/cmr/m/n/10.95 , the ob-ject calls \OT1/cmtt/m/n/10. 95 SubMtx[]new() \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 SubMtx[]free() ) (./proto.tex Overfull \hbox (14.44592pt too wide) in paragraph at lines 33--46 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 mode\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nactive\OT1/cmr/m/n /10.95 , \OT1/cmtt/m/n/10.95 nbytesactive\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10. 95 nbytesrequested\OT1/cmr/m/n/10.95 , [2] [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11028 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex Overfull \hbox (8.41794pt too wide) in paragraph at lines 14--19 []\OT1/cmtt/m/n/10.95 int mode \OT1/cmr/m/n/10.95 : be-hav-ior mode. When \OT1/ cmtt/m/n/10.95 mode = 0\OT1/cmr/m/n/10.95 , the ob-ject calls \OT1/cmtt/m/n/10. 95 SubMtx[]new() \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 SubMtx[]free() ) (./proto.tex Overfull \hbox (14.44592pt too wide) in paragraph at lines 33--46 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 mode\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nactive\OT1/cmr/m/n /10.95 , \OT1/cmtt/m/n/10.95 nbytesactive\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10. 95 nbytesrequested\OT1/cmr/m/n/10.95 , [2] [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11028 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> ChvManager.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (2.62105pt too wide) in paragraph at lines 105--113 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 coords bbox \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if \OT1/cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 CO ORDS[]BY[]TUPLE \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 COORDS[]BY[]COORD\OT1 /cmr/m/n/10.95 , [2] Overfull \hbox (2.62105pt too wide) in paragraph at lines 128--136 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 coords bbox \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if \OT1/cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 CO ORDS[]BY[]TUPLE \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 COORDS[]BY[]COORD\OT1 /cmr/m/n/10.95 , [3] Overfull \hbox (4.44226pt too wide) in paragraph at lines 283--289 \OT1/cmr/m/n/10.95 cess-ful, it then calls \OT1/cmtt/m/n/10.95 Coords[]writeFro mFormattedFile() \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 Coords[]writeFromBin aryFile()\OT1/cmr/m/n/10.95 , [4]) (./drivers.tex Overfull \hbox (42.63402pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.coordsf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.coord sb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Coords \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 Coords[]readFromFile() Overfull \hbox (1.44826pt too wide) in paragraph at lines 65--74 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 outCoordsFile \OT1/cmr/m/n/10.95 p a-ram-e-ter is the out-put file for the \OT1/cmtt/m/n/10.95 Coords \OT1/cmr/m/n /10.95 ob-ject. If \OT1/cmtt/m/n/10.95 outCoordsFile Overfull \hbox (18.78839pt too wide) in paragraph at lines 65--74 \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 none \OT1/cmr/m/n/10.95 then the \OT1 /cmtt/m/n/10.95 Coords \OT1/cmr/m/n/10.95 ob-ject is not writ-ten to a file. Ot h-er-wise, the \OT1/cmtt/m/n/10.95 Coords[]writeToFile() [5]) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 18928 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (2.62105pt too wide) in paragraph at lines 105--113 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 coords bbox \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if \OT1/cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 CO ORDS[]BY[]TUPLE \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 COORDS[]BY[]COORD\OT1 /cmr/m/n/10.95 , [2] Overfull \hbox (2.62105pt too wide) in paragraph at lines 128--136 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 coords bbox \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if \OT1/cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 CO ORDS[]BY[]TUPLE \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 COORDS[]BY[]COORD\OT1 /cmr/m/n/10.95 , [3] Overfull \hbox (4.44226pt too wide) in paragraph at lines 283--289 \OT1/cmr/m/n/10.95 cess-ful, it then calls \OT1/cmtt/m/n/10.95 Coords[]writeFro mFormattedFile() \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 Coords[]writeFromBin aryFile()\OT1/cmr/m/n/10.95 , [4]) (./drivers.tex Overfull \hbox (42.63402pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.coordsf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.coord sb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Coords \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 Coords[]readFromFile() Overfull \hbox (1.44826pt too wide) in paragraph at lines 65--74 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 outCoordsFile \OT1/cmr/m/n/10.95 p a-ram-e-ter is the out-put file for the \OT1/cmtt/m/n/10.95 Coords \OT1/cmr/m/n /10.95 ob-ject. If \OT1/cmtt/m/n/10.95 outCoordsFile Overfull \hbox (18.78839pt too wide) in paragraph at lines 65--74 \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 none \OT1/cmr/m/n/10.95 then the \OT1 /cmtt/m/n/10.95 Coords \OT1/cmr/m/n/10.95 ob-ject is not writ-ten to a file. Ot h-er-wise, the \OT1/cmtt/m/n/10.95 Coords[]writeToFile() [5]) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 18928 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (2.62105pt too wide) in paragraph at lines 105--113 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 coords bbox \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if \OT1/cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 CO ORDS[]BY[]TUPLE \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 COORDS[]BY[]COORD\OT1 /cmr/m/n/10.95 , [2] Overfull \hbox (2.62105pt too wide) in paragraph at lines 128--136 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 coords bbox \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if \OT1/cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 CO ORDS[]BY[]TUPLE \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 COORDS[]BY[]COORD\OT1 /cmr/m/n/10.95 , [3] Overfull \hbox (4.44226pt too wide) in paragraph at lines 283--289 \OT1/cmr/m/n/10.95 cess-ful, it then calls \OT1/cmtt/m/n/10.95 Coords[]writeFro mFormattedFile() \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 Coords[]writeFromBin aryFile()\OT1/cmr/m/n/10.95 , [4]) (./drivers.tex Overfull \hbox (42.63402pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.coordsf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.coord sb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Coords \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 Coords[]readFromFile() Overfull \hbox (1.44826pt too wide) in paragraph at lines 65--74 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 outCoordsFile \OT1/cmr/m/n/10.95 p a-ram-e-ter is the out-put file for the \OT1/cmtt/m/n/10.95 Coords \OT1/cmr/m/n /10.95 ob-ject. If \OT1/cmtt/m/n/10.95 outCoordsFile Overfull \hbox (18.78839pt too wide) in paragraph at lines 65--74 \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 none \OT1/cmr/m/n/10.95 then the \OT1 /cmtt/m/n/10.95 Coords \OT1/cmr/m/n/10.95 ob-ject is not writ-ten to a file. Ot h-er-wise, the \OT1/cmtt/m/n/10.95 Coords[]writeToFile() [5]) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 18928 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Coords.ps . [1] [2] [3] [4] [5] [6] [7] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3] [4] [5]) (./drivers.tex [6] Overfull \hbox (42.63402pt too wide) in paragraph at lines 64--69 \OT1/cmtt/m/n/10.95 *.dstreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.dstre eb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 DSTree \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 DSTree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 114--119 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [7] [8]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 25760 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3] [4] [5]) (./drivers.tex [6] Overfull \hbox (42.63402pt too wide) in paragraph at lines 64--69 \OT1/cmtt/m/n/10.95 *.dstreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.dstre eb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 DSTree \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 DSTree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 114--119 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [7] [8]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 25760 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3] [4] [5]) (./drivers.tex [6] Overfull \hbox (42.63402pt too wide) in paragraph at lines 64--69 \OT1/cmtt/m/n/10.95 *.dstreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.dstre eb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 DSTree \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 DSTree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 114--119 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [7] [8]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 25760 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> DSTree.ps . [1] [2] [3] [4] [5] [6] [7] [8] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1]) (./proto.tex [2] [3] (/usr/share/texmf-texlive/tex/latex/base/omlcmr.fd) [4] [5] Overfull \hbox (11.7664pt too wide) in paragraph at lines 413--413 [] \OT1/cmtt/m/n/10.95 double taubig, int *pnzero, int * pnsmall, int *pnbig ) ;[] [6] [7]) (./drivers.tex) (./main.ind [8] [9]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (9 pages, 27200 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1]) (./proto.tex [2] [3] (/usr/share/texmf-texlive/tex/latex/base/omlcmr.fd) [4] [5] Overfull \hbox (11.7664pt too wide) in paragraph at lines 413--413 [] \OT1/cmtt/m/n/10.95 double taubig, int *pnzero, int * pnsmall, int *pnbig ) ;[] [6] [7]) (./drivers.tex) (./main.ind [8] [9]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (9 pages, 27200 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1]) (./proto.tex [2] [3] (/usr/share/texmf-texlive/tex/latex/base/omlcmr.fd) [4] [5] Overfull \hbox (11.7664pt too wide) in paragraph at lines 413--413 [] \OT1/cmtt/m/n/10.95 double taubig, int *pnzero, int * pnsmall, int *pnbig ) ;[] [6] [7]) (./drivers.tex) (./main.ind [8] [9]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (9 pages, 27200 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> DV.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3] [4] [5] [6] [7]) (./main.ind [8] [9]) (./main.aux) ) Output written on main.dvi (9 pages, 30668 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3] [4] [5] [6] [7]) (./main.ind [8] [9]) (./main.aux) ) Output written on main.dvi (9 pages, 30668 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3] [4] [5] [6] [7]) (./main.ind [8] [9]) (./main.aux) ) Output written on main.dvi (9 pages, 30668 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> DenseMtx.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `and90-random' on page 1 undefined on input line 6. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2]) (./drivers.tex [3] Overfull \hbox (10.7556pt too wide) in paragraph at lines 29--34 []\OT1/cmr/m/n/10.95 When \OT1/cmtt/m/n/10.95 distribution = 1\OT1/cmr/m/n/10.9 5 , \OT1/cmtt/m/n/10.95 param1 \OT1/cmr/m/n/10.95 is the lower bound for the in -ter-val. When \OT1/cmtt/m/n/10.95 distribution Overfull \hbox (13.49315pt too wide) in paragraph at lines 34--39 []\OT1/cmr/m/n/10.95 When \OT1/cmtt/m/n/10.95 distribution = 1\OT1/cmr/m/n/10.9 5 , \OT1/cmtt/m/n/10.95 param2 \OT1/cmr/m/n/10.95 is the up-per bound for the i n-ter-val. When \OT1/cmtt/m/n/10.95 distribution ) (./main.ind [4] [5]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 9836 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `and90-random' on page 1 undefined on input line 6. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2]) (./drivers.tex [3] Overfull \hbox (10.7556pt too wide) in paragraph at lines 29--34 []\OT1/cmr/m/n/10.95 When \OT1/cmtt/m/n/10.95 distribution = 1\OT1/cmr/m/n/10.9 5 , \OT1/cmtt/m/n/10.95 param1 \OT1/cmr/m/n/10.95 is the lower bound for the in -ter-val. When \OT1/cmtt/m/n/10.95 distribution Overfull \hbox (13.49315pt too wide) in paragraph at lines 34--39 []\OT1/cmr/m/n/10.95 When \OT1/cmtt/m/n/10.95 distribution = 1\OT1/cmr/m/n/10.9 5 , \OT1/cmtt/m/n/10.95 param2 \OT1/cmr/m/n/10.95 is the up-per bound for the i n-ter-val. When \OT1/cmtt/m/n/10.95 distribution ) (./main.ind [4] [5]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 9836 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `and90-random' on page 1 undefined on input line 6. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2]) (./drivers.tex [3] Overfull \hbox (10.7556pt too wide) in paragraph at lines 29--34 []\OT1/cmr/m/n/10.95 When \OT1/cmtt/m/n/10.95 distribution = 1\OT1/cmr/m/n/10.9 5 , \OT1/cmtt/m/n/10.95 param1 \OT1/cmr/m/n/10.95 is the lower bound for the in -ter-val. When \OT1/cmtt/m/n/10.95 distribution Overfull \hbox (13.49315pt too wide) in paragraph at lines 34--39 []\OT1/cmr/m/n/10.95 When \OT1/cmtt/m/n/10.95 distribution = 1\OT1/cmr/m/n/10.9 5 , \OT1/cmtt/m/n/10.95 param2 \OT1/cmr/m/n/10.95 is the up-per bound for the i n-ter-val. When \OT1/cmtt/m/n/10.95 distribution ) (./main.ind [4] [5]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 9836 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Drand.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (12.76239pt too wide) in paragraph at lines 43--53 \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , then \OT 1/cmtt/m/n/10.95 IVL[]free(egraph->adjIVL) \OT1/cmr/m/n/10.95 is called to free the \OT1/cmtt/m/n/10.95 IVL \OT1/cmr/m/n/10.95 ob-ject. If \OT1/cmtt/m/n/10.95 egraph->vwghts [2] Overfull \hbox (3.0602pt too wide) in paragraph at lines 138--145 \OT1/cmr/m/n/10.95 the grid points. The re-sult-ing graph has \OT1/cmtt/m/n/10. 95 n1*n2*n3*ncomp \OT1/cmr/m/n/10.95 ver-tices and \OT1/cmtt/m/n/10.95 (n1-1)*( n2-1)*(n3-1) [3]) (./drivers.tex Overfull \hbox (42.63402pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.egraphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.egrap hb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 EGraph \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 EGraph[]readFromFile() [4] Overfull \hbox (1.44826pt too wide) in paragraph at lines 114--122 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 outEGraphFile \OT1/cmr/m/n/10.95 p a-ram-e-ter is the out-put file for the \OT1/cmtt/m/n/10.95 EGraph \OT1/cmr/m/n /10.95 ob-ject. If \OT1/cmtt/m/n/10.95 outEGraphFile Overfull \hbox (18.78839pt too wide) in paragraph at lines 114--122 \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 none \OT1/cmr/m/n/10.95 then the \OT1 /cmtt/m/n/10.95 EGraph \OT1/cmr/m/n/10.95 ob-ject is not writ-ten to a file. Ot h-er-wise, the \OT1/cmtt/m/n/10.95 EGraph[]writeToFile() [5]) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 19092 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (12.76239pt too wide) in paragraph at lines 43--53 \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , then \OT 1/cmtt/m/n/10.95 IVL[]free(egraph->adjIVL) \OT1/cmr/m/n/10.95 is called to free the \OT1/cmtt/m/n/10.95 IVL \OT1/cmr/m/n/10.95 ob-ject. If \OT1/cmtt/m/n/10.95 egraph->vwghts [2] Overfull \hbox (3.0602pt too wide) in paragraph at lines 138--145 \OT1/cmr/m/n/10.95 the grid points. The re-sult-ing graph has \OT1/cmtt/m/n/10. 95 n1*n2*n3*ncomp \OT1/cmr/m/n/10.95 ver-tices and \OT1/cmtt/m/n/10.95 (n1-1)*( n2-1)*(n3-1) [3]) (./drivers.tex Overfull \hbox (42.63402pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.egraphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.egrap hb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 EGraph \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 EGraph[]readFromFile() [4] Overfull \hbox (1.44826pt too wide) in paragraph at lines 114--122 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 outEGraphFile \OT1/cmr/m/n/10.95 p a-ram-e-ter is the out-put file for the \OT1/cmtt/m/n/10.95 EGraph \OT1/cmr/m/n /10.95 ob-ject. If \OT1/cmtt/m/n/10.95 outEGraphFile Overfull \hbox (18.78839pt too wide) in paragraph at lines 114--122 \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 none \OT1/cmr/m/n/10.95 then the \OT1 /cmtt/m/n/10.95 EGraph \OT1/cmr/m/n/10.95 ob-ject is not writ-ten to a file. Ot h-er-wise, the \OT1/cmtt/m/n/10.95 EGraph[]writeToFile() [5]) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 19092 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (12.76239pt too wide) in paragraph at lines 43--53 \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , then \OT 1/cmtt/m/n/10.95 IVL[]free(egraph->adjIVL) \OT1/cmr/m/n/10.95 is called to free the \OT1/cmtt/m/n/10.95 IVL \OT1/cmr/m/n/10.95 ob-ject. If \OT1/cmtt/m/n/10.95 egraph->vwghts [2] Overfull \hbox (3.0602pt too wide) in paragraph at lines 138--145 \OT1/cmr/m/n/10.95 the grid points. The re-sult-ing graph has \OT1/cmtt/m/n/10. 95 n1*n2*n3*ncomp \OT1/cmr/m/n/10.95 ver-tices and \OT1/cmtt/m/n/10.95 (n1-1)*( n2-1)*(n3-1) [3]) (./drivers.tex Overfull \hbox (42.63402pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.egraphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.egrap hb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 EGraph \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 EGraph[]readFromFile() [4] Overfull \hbox (1.44826pt too wide) in paragraph at lines 114--122 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 outEGraphFile \OT1/cmr/m/n/10.95 p a-ram-e-ter is the out-put file for the \OT1/cmtt/m/n/10.95 EGraph \OT1/cmr/m/n /10.95 ob-ject. If \OT1/cmtt/m/n/10.95 outEGraphFile Overfull \hbox (18.78839pt too wide) in paragraph at lines 114--122 \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 none \OT1/cmr/m/n/10.95 then the \OT1 /cmtt/m/n/10.95 EGraph \OT1/cmr/m/n/10.95 ob-ject is not writ-ten to a file. Ot h-er-wise, the \OT1/cmtt/m/n/10.95 EGraph[]writeToFile() [5]) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 19092 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> EGraph.ps . [1] [2] [3] [4] [5] [6] [7] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex [2] [3] [4] LaTeX Warning: Citation `liu90-etree' on page 5 undefined on input line 292. Overfull \hbox (11.7664pt too wide) in paragraph at lines 320--320 []\OT1/cmtt/m/n/10.95 void ETree_initFromDenseMatrix ( ETree *etree, int n, in t option, int param ) ;[] Overfull \hbox (52.00722pt too wide) in paragraph at lines 354--354 []\OT1/cmtt/m/n/10.95 int ETree_initFromSubtree ( ETree *subtree, IV *nodeidsI V, ETree *etree, IV *vtxIV ) ;[] [5] Overfull \hbox (0.18552pt too wide) in paragraph at lines 433--439 \OT1/cmr/m/n/10.95 pa-ram-e-ter can be one of \OT1/cmtt/m/n/10.95 SPOOLES[]SYMM ETRIC\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN \OT1/cmr/m/n/1 0.95 or \OT1/cmtt/m/n/10.95 SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10.95 . Overfull \hbox (23.26378pt too wide) in paragraph at lines 466--466 []\OT1/cmtt/m/n/10.95 double ETree_nInternalOpsInFront ( ETree *etree, int typ e, int symflag, int J ) ;[] [6] Overfull \hbox (23.26378pt too wide) in paragraph at lines 486--486 []\OT1/cmtt/m/n/10.95 double ETree_nExternalOpsInFront ( ETree *etree, int typ e, int symflag, int J ) ;[] Overfull \hbox (69.25328pt too wide) in paragraph at lines 565--565 []\OT1/cmtt/m/n/10.95 ETree * ETree_spliceTwoEtrees ( ETree *etree0, Graph *gr aph, IV *mapIV, ETree *etree1 ) ;[] [7] LaTeX Warning: Citation `liu91-generalizedEnvelope' on page 8 undefined on inpu t line 661. [8] LaTeX Warning: Citation `ash89-relaxed' on page 9 undefined on input line 681. Overfull \hbox (0.29208pt too wide) in paragraph at lines 691--695 []\OT1/cmr/m/n/10.95 the struc-tures of $\OML/cmm/m/it/10.95 v[]$ \OT1/cmr/m/n/ 10.95 and $\OML/cmm/m/it/10.95 v[]$ \OT1/cmr/m/n/10.95 are nested, i.e., \OT1/c mtt/m/n/10.95 bndwght[$\OML/cmm/m/it/10.95 v[]$\OT1/cmtt/m/n/10.95 ] = nodwght[ $\OML/cmm/m/it/10.95 v[]$\OT1/cmtt/m/n/10.95 ] + bndwght[$\OML/cmm/m/it/10.95 v []$\OT1/cmtt/m/n/10.95 ] [9] LaTeX Warning: Citation `liu85-mfstorage' on page 10 undefined on input line 75 9. [10] [11] Overfull \hbox (29.01247pt too wide) in paragraph at lines 944--944 []\OT1/cmtt/m/n/10.95 IV * ETree_msByNopsCutoff ( ETree *etree, double cutoff, int type, int symflag ) ;[] Overfull \hbox (23.26378pt too wide) in paragraph at lines 1000--1000 [] \OT1/cmtt/m/n/10.95 double alpha, int *ptotalgain, int msglvl, FILE *msgFile ) ;[] [12] LaTeX Warning: Citation `duf83-multifrontal' on page 13 undefined on input line 1038. LaTeX Warning: Citation `ash89-relaxed' on page 13 undefined on input line 1039 . LaTeX Warning: Citation `ash89-relaxed' on page 13 undefined on input line 1064 . [13] [14] [15] [16] [17]) (./drivers.tex Overfull \hbox (19.63927pt too wide) in paragraph at lines 31--36 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [18] Overfull \hbox (19.63927pt too wide) in paragraph at lines 81--86 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [19] [20] Overfull \hbox (19.63927pt too wide) in paragraph at lines 258--263 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [21] Overfull \hbox (0.26903pt too wide) in paragraph at lines 333--333 []\OT1/cmtt/m/n/10.95 testFS msglvl msgFile inETreeFile labelflag radius first EPSfile secondEPSfile[] Overfull \hbox (19.63927pt too wide) in paragraph at lines 358--363 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() psfig: searching ../../ETree/doc/FS1.eps for bounding box psfig: including ../../ETree/doc/FS1.eps psfig: searching ../../ETree/doc/FS2.eps for bounding box psfig: including ../../ETree/doc/FS2.eps [22] Overfull \hbox (19.63927pt too wide) in paragraph at lines 411--415 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [23] Overfull \hbox (19.63927pt too wide) in paragraph at lines 437--442 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 472--477 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [24] Overfull \hbox (19.63927pt too wide) in paragraph at lines 573--578 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [25] Overfull \hbox (17.51509pt too wide) in paragraph at lines 617--617 []\OT1/cmtt/m/n/10.95 testStats msglvl msgFile inETreeFile labelflag radius fi rstEPSfile secondEPSfile[] Overfull \hbox (19.63927pt too wide) in paragraph at lines 653--658 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 658--663 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [26] LaTeX Warning: Reference `subsection:Tree:proto:drawing' on page 27 undefined o n input line 670. psfig: searching ../../ETree/doc/GRD7x7x7_nzA.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzA.eps psfig: searching ../../ETree/doc/GRD7x7x7_nzF.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzF.eps psfig: searching ../../ETree/doc/GRD7x7x7_forwops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_forwops.eps psfig: searching ../../ETree/doc/GRD7x7x7_backops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_backops.eps psfig: searching ../../ETree/doc/workingStorage.eps for bounding box psfig: including ../../ETree/doc/workingStorage.eps Overfull \hbox (19.63927pt too wide) in paragraph at lines 732--737 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 737--741 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() LaTeX Warning: Citation `ash89-relaxed' on page 27 undefined on input line 752. LaTeX Warning: Citation `duf83-multifrontal' on page 27 undefined on input line 752. [27] [28] Overfull \hbox (19.63927pt too wide) in paragraph at lines 798--803 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 803--808 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [29] [30] [31]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (31 pages, 108888 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex [2] [3] [4] LaTeX Warning: Citation `liu90-etree' on page 5 undefined on input line 292. Overfull \hbox (11.7664pt too wide) in paragraph at lines 320--320 []\OT1/cmtt/m/n/10.95 void ETree_initFromDenseMatrix ( ETree *etree, int n, in t option, int param ) ;[] Overfull \hbox (52.00722pt too wide) in paragraph at lines 354--354 []\OT1/cmtt/m/n/10.95 int ETree_initFromSubtree ( ETree *subtree, IV *nodeidsI V, ETree *etree, IV *vtxIV ) ;[] [5] Overfull \hbox (0.18552pt too wide) in paragraph at lines 433--439 \OT1/cmr/m/n/10.95 pa-ram-e-ter can be one of \OT1/cmtt/m/n/10.95 SPOOLES[]SYMM ETRIC\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN \OT1/cmr/m/n/1 0.95 or \OT1/cmtt/m/n/10.95 SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10.95 . Overfull \hbox (23.26378pt too wide) in paragraph at lines 466--466 []\OT1/cmtt/m/n/10.95 double ETree_nInternalOpsInFront ( ETree *etree, int typ e, int symflag, int J ) ;[] [6] Overfull \hbox (23.26378pt too wide) in paragraph at lines 486--486 []\OT1/cmtt/m/n/10.95 double ETree_nExternalOpsInFront ( ETree *etree, int typ e, int symflag, int J ) ;[] Overfull \hbox (69.25328pt too wide) in paragraph at lines 565--565 []\OT1/cmtt/m/n/10.95 ETree * ETree_spliceTwoEtrees ( ETree *etree0, Graph *gr aph, IV *mapIV, ETree *etree1 ) ;[] [7] LaTeX Warning: Citation `liu91-generalizedEnvelope' on page 8 undefined on inpu t line 661. [8] LaTeX Warning: Citation `ash89-relaxed' on page 9 undefined on input line 681. Overfull \hbox (0.29208pt too wide) in paragraph at lines 691--695 []\OT1/cmr/m/n/10.95 the struc-tures of $\OML/cmm/m/it/10.95 v[]$ \OT1/cmr/m/n/ 10.95 and $\OML/cmm/m/it/10.95 v[]$ \OT1/cmr/m/n/10.95 are nested, i.e., \OT1/c mtt/m/n/10.95 bndwght[$\OML/cmm/m/it/10.95 v[]$\OT1/cmtt/m/n/10.95 ] = nodwght[ $\OML/cmm/m/it/10.95 v[]$\OT1/cmtt/m/n/10.95 ] + bndwght[$\OML/cmm/m/it/10.95 v []$\OT1/cmtt/m/n/10.95 ] [9] LaTeX Warning: Citation `liu85-mfstorage' on page 10 undefined on input line 75 9. [10] [11] Overfull \hbox (29.01247pt too wide) in paragraph at lines 944--944 []\OT1/cmtt/m/n/10.95 IV * ETree_msByNopsCutoff ( ETree *etree, double cutoff, int type, int symflag ) ;[] Overfull \hbox (23.26378pt too wide) in paragraph at lines 1000--1000 [] \OT1/cmtt/m/n/10.95 double alpha, int *ptotalgain, int msglvl, FILE *msgFile ) ;[] [12] LaTeX Warning: Citation `duf83-multifrontal' on page 13 undefined on input line 1038. LaTeX Warning: Citation `ash89-relaxed' on page 13 undefined on input line 1039 . LaTeX Warning: Citation `ash89-relaxed' on page 13 undefined on input line 1064 . [13] [14] [15] [16] [17]) (./drivers.tex Overfull \hbox (19.63927pt too wide) in paragraph at lines 31--36 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [18] Overfull \hbox (19.63927pt too wide) in paragraph at lines 81--86 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [19] [20] Overfull \hbox (19.63927pt too wide) in paragraph at lines 258--263 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [21] Overfull \hbox (0.26903pt too wide) in paragraph at lines 333--333 []\OT1/cmtt/m/n/10.95 testFS msglvl msgFile inETreeFile labelflag radius first EPSfile secondEPSfile[] Overfull \hbox (19.63927pt too wide) in paragraph at lines 358--363 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() psfig: searching ../../ETree/doc/FS1.eps for bounding box psfig: including ../../ETree/doc/FS1.eps psfig: searching ../../ETree/doc/FS2.eps for bounding box psfig: including ../../ETree/doc/FS2.eps [22] Overfull \hbox (19.63927pt too wide) in paragraph at lines 411--415 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [23] Overfull \hbox (19.63927pt too wide) in paragraph at lines 437--442 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 472--477 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [24] Overfull \hbox (19.63927pt too wide) in paragraph at lines 573--578 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [25] Overfull \hbox (17.51509pt too wide) in paragraph at lines 617--617 []\OT1/cmtt/m/n/10.95 testStats msglvl msgFile inETreeFile labelflag radius fi rstEPSfile secondEPSfile[] Overfull \hbox (19.63927pt too wide) in paragraph at lines 653--658 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 658--663 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [26] LaTeX Warning: Reference `subsection:Tree:proto:drawing' on page 27 undefined o n input line 670. psfig: searching ../../ETree/doc/GRD7x7x7_nzA.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzA.eps psfig: searching ../../ETree/doc/GRD7x7x7_nzF.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzF.eps psfig: searching ../../ETree/doc/GRD7x7x7_forwops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_forwops.eps psfig: searching ../../ETree/doc/GRD7x7x7_backops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_backops.eps psfig: searching ../../ETree/doc/workingStorage.eps for bounding box psfig: including ../../ETree/doc/workingStorage.eps Overfull \hbox (19.63927pt too wide) in paragraph at lines 732--737 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 737--741 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() LaTeX Warning: Citation `ash89-relaxed' on page 27 undefined on input line 752. LaTeX Warning: Citation `duf83-multifrontal' on page 27 undefined on input line 752. [27] [28] Overfull \hbox (19.63927pt too wide) in paragraph at lines 798--803 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 803--808 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [29] [30] [31]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (31 pages, 108888 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex [2] [3] [4] LaTeX Warning: Citation `liu90-etree' on page 5 undefined on input line 292. Overfull \hbox (11.7664pt too wide) in paragraph at lines 320--320 []\OT1/cmtt/m/n/10.95 void ETree_initFromDenseMatrix ( ETree *etree, int n, in t option, int param ) ;[] Overfull \hbox (52.00722pt too wide) in paragraph at lines 354--354 []\OT1/cmtt/m/n/10.95 int ETree_initFromSubtree ( ETree *subtree, IV *nodeidsI V, ETree *etree, IV *vtxIV ) ;[] [5] Overfull \hbox (0.18552pt too wide) in paragraph at lines 433--439 \OT1/cmr/m/n/10.95 pa-ram-e-ter can be one of \OT1/cmtt/m/n/10.95 SPOOLES[]SYMM ETRIC\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 SPOOLES[]HERMITIAN \OT1/cmr/m/n/1 0.95 or \OT1/cmtt/m/n/10.95 SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10.95 . Overfull \hbox (23.26378pt too wide) in paragraph at lines 466--466 []\OT1/cmtt/m/n/10.95 double ETree_nInternalOpsInFront ( ETree *etree, int typ e, int symflag, int J ) ;[] [6] Overfull \hbox (23.26378pt too wide) in paragraph at lines 486--486 []\OT1/cmtt/m/n/10.95 double ETree_nExternalOpsInFront ( ETree *etree, int typ e, int symflag, int J ) ;[] Overfull \hbox (69.25328pt too wide) in paragraph at lines 565--565 []\OT1/cmtt/m/n/10.95 ETree * ETree_spliceTwoEtrees ( ETree *etree0, Graph *gr aph, IV *mapIV, ETree *etree1 ) ;[] [7] LaTeX Warning: Citation `liu91-generalizedEnvelope' on page 8 undefined on inpu t line 661. [8] LaTeX Warning: Citation `ash89-relaxed' on page 9 undefined on input line 681. Overfull \hbox (0.29208pt too wide) in paragraph at lines 691--695 []\OT1/cmr/m/n/10.95 the struc-tures of $\OML/cmm/m/it/10.95 v[]$ \OT1/cmr/m/n/ 10.95 and $\OML/cmm/m/it/10.95 v[]$ \OT1/cmr/m/n/10.95 are nested, i.e., \OT1/c mtt/m/n/10.95 bndwght[$\OML/cmm/m/it/10.95 v[]$\OT1/cmtt/m/n/10.95 ] = nodwght[ $\OML/cmm/m/it/10.95 v[]$\OT1/cmtt/m/n/10.95 ] + bndwght[$\OML/cmm/m/it/10.95 v []$\OT1/cmtt/m/n/10.95 ] [9] LaTeX Warning: Citation `liu85-mfstorage' on page 10 undefined on input line 75 9. [10] [11] Overfull \hbox (29.01247pt too wide) in paragraph at lines 944--944 []\OT1/cmtt/m/n/10.95 IV * ETree_msByNopsCutoff ( ETree *etree, double cutoff, int type, int symflag ) ;[] Overfull \hbox (23.26378pt too wide) in paragraph at lines 1000--1000 [] \OT1/cmtt/m/n/10.95 double alpha, int *ptotalgain, int msglvl, FILE *msgFile ) ;[] [12] LaTeX Warning: Citation `duf83-multifrontal' on page 13 undefined on input line 1038. LaTeX Warning: Citation `ash89-relaxed' on page 13 undefined on input line 1039 . LaTeX Warning: Citation `ash89-relaxed' on page 13 undefined on input line 1064 . [13] [14] [15] [16] [17]) (./drivers.tex Overfull \hbox (19.63927pt too wide) in paragraph at lines 31--36 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [18] Overfull \hbox (19.63927pt too wide) in paragraph at lines 81--86 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [19] [20] Overfull \hbox (19.63927pt too wide) in paragraph at lines 258--263 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [21] Overfull \hbox (0.26903pt too wide) in paragraph at lines 333--333 []\OT1/cmtt/m/n/10.95 testFS msglvl msgFile inETreeFile labelflag radius first EPSfile secondEPSfile[] Overfull \hbox (19.63927pt too wide) in paragraph at lines 358--363 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() psfig: searching ../../ETree/doc/FS1.eps for bounding box psfig: including ../../ETree/doc/FS1.eps psfig: searching ../../ETree/doc/FS2.eps for bounding box psfig: including ../../ETree/doc/FS2.eps [22] Overfull \hbox (19.63927pt too wide) in paragraph at lines 411--415 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [23] Overfull \hbox (19.63927pt too wide) in paragraph at lines 437--442 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 472--477 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [24] Overfull \hbox (19.63927pt too wide) in paragraph at lines 573--578 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() [25] Overfull \hbox (17.51509pt too wide) in paragraph at lines 617--617 []\OT1/cmtt/m/n/10.95 testStats msglvl msgFile inETreeFile labelflag radius fi rstEPSfile secondEPSfile[] Overfull \hbox (19.63927pt too wide) in paragraph at lines 653--658 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 658--663 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [26] LaTeX Warning: Reference `subsection:Tree:proto:drawing' on page 27 undefined o n input line 670. psfig: searching ../../ETree/doc/GRD7x7x7_nzA.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzA.eps psfig: searching ../../ETree/doc/GRD7x7x7_nzF.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_nzF.eps psfig: searching ../../ETree/doc/GRD7x7x7_forwops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_forwops.eps psfig: searching ../../ETree/doc/GRD7x7x7_backops.eps for bounding box psfig: including ../../ETree/doc/GRD7x7x7_backops.eps psfig: searching ../../ETree/doc/workingStorage.eps for bounding box psfig: including ../../ETree/doc/workingStorage.eps Overfull \hbox (19.63927pt too wide) in paragraph at lines 732--737 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 737--741 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() LaTeX Warning: Citation `ash89-relaxed' on page 27 undefined on input line 752. LaTeX Warning: Citation `duf83-multifrontal' on page 27 undefined on input line 752. [27] [28] Overfull \hbox (19.63927pt too wide) in paragraph at lines 798--803 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 803--808 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [29] [30] [31]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (31 pages, 108888 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> ETree.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23<../../ETree/doc/FS1.eps><../../ETree/doc/FS2.eps>] [24] [25] [26] [27<../../ETree/doc/workingStorage.eps>] [28 <../../ETree/doc/GRD7x7x7_nzA.eps><../../ETree/doc/GRD7x7x7_nzF.eps> <../../ETree/doc/GRD7x7x7_forwops.eps><../../ETree/doc/GRD7x7x7_backops.eps>] [29] [30] [31] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] psfig: searching ../../FrontMtx/doc/simple.eps for bounding box psfig: including ../../FrontMtx/doc/simple.eps [2] [3]) (./dataStructure.tex [4] Overfull \hbox (12.9766pt too wide) in paragraph at lines 54--59 []\OT1/cmtt/m/n/10.95 Tree *tree \OT1/cmr/m/n/10.95 : Tree ob-ject that holds t he tree of fronts. Note, nor-mally this is \OT1/cmtt/m/n/10.95 frontETree->tree \OT1/cmr/m/n/10.95 , [5]) (./proto.tex [6] [7] [8] [9] [10] Overfull \hbox (0.26903pt too wide) in paragraph at lines 411--411 [] \OT1/cmtt/m/n/10.95 int parent[], ChvList *aggList, ChvList *postList, Ch vManager *chvmanager,[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 463--463 [] \OT1/cmtt/m/n/10.95 char inactiveFlag, int ms glvl, FILE *msgFile ) ;[] [11] Overfull \hbox (6.01772pt too wide) in paragraph at lines 529--529 [] \OT1/cmtt/m/n/10.95 char status[], DV *tempDV, int ms glvl, FILE *msgFile) ;[] [12] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 []\OT1/cmtt/m/n/10.95 Chv * FrontMtx_factorInpMtx ( FrontMtx *frontmtx, InpMtx *inpmtx, double tau,[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 [] \OT1/cmtt/m/n/10.95 double cpus[], int stats[], int msgl vl, FILE *msgFile ) ;[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 []\OT1/cmtt/m/n/10.95 Chv * FrontMtx_factorPencil ( FrontMtx *frontmtx, Pencil *pencil, double tau,[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 [] \OT1/cmtt/m/n/10.95 double cpus[], int stats[], int msgl vl, FILE *msgFile ) ;[] [13] Overfull \hbox (2.58154pt too wide) in paragraph at lines 717--725 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 frontmtx\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 mtxA\OT1/cmr/m/n/10.95 , \OT1/ cmtt/m/n/10.95 rowsIVL\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 firstnz\OT1/cmr/ m/n/10.95 , \OT1/cmtt/m/n/10.95 updlist\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 chvmanager\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 status\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 colmap\OT1/cmr/m/n/10.95 , [14] Overfull \hbox (46.25853pt too wide) in paragraph at lines 765--765 [] \OT1/cmtt/m/n/10.95 ChvManager *chvmanager, int msglvl, FILE *msgFile ) ;[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 833--833 []\OT1/cmtt/m/n/10.95 void FrontMtx_postProcess ( FrontMtx *frontmtx, int msgl vl, FILE *msgFile ) ;[] [15] Overfull \hbox (40.50984pt too wide) in paragraph at lines 891--891 []\OT1/cmtt/m/n/10.95 void FrontMtx_splitUpperMatrices ( FrontMtx *frontmtx, i nt msglvl, FILE *msgFile ) ;[] Overfull \hbox (40.50984pt too wide) in paragraph at lines 891--891 []\OT1/cmtt/m/n/10.95 void FrontMtx_splitLowerMatrices ( FrontMtx *frontmtx, i nt msglvl, FILE *msgFile ) ;[] [16] Overfull \hbox (11.7664pt too wide) in paragraph at lines 979--979 []\OT1/cmtt/m/n/10.95 IP ** FrontMtx_forwardSetup ( FrontMtx *frontmtx, int ms glvl, FILE *msgFile ) ;[] Overfull \hbox (17.51509pt too wide) in paragraph at lines 993--993 []\OT1/cmtt/m/n/10.95 IP ** FrontMtx_backwardSetup ( FrontMtx *frontmtx, int m sglvl, FILE *msgFile ) ;[] [17] Overfull \hbox (17.51509pt too wide) in paragraph at lines 1024--1024 [] \OT1/cmtt/m/n/10.95 SubMtxManager *mtxmanager, double cpus[], int m sglvl, FILE *msgFile ) ;[] [18] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 1142. Overfull \hbox (34.76115pt too wide) in paragraph at lines 1165--1165 []\OT1/cmtt/m/n/10.95 void FrontMtx_inertia ( FrontMtx *frontmtx, int *pnneg, int *pnzero, int *pnpos ) ;[] [19] [20]) (./drivers.tex [21] [22]) (./main.ind [23] [24] [25]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (25 pages, 83108 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] psfig: searching ../../FrontMtx/doc/simple.eps for bounding box psfig: including ../../FrontMtx/doc/simple.eps [2] [3]) (./dataStructure.tex [4] Overfull \hbox (12.9766pt too wide) in paragraph at lines 54--59 []\OT1/cmtt/m/n/10.95 Tree *tree \OT1/cmr/m/n/10.95 : Tree ob-ject that holds t he tree of fronts. Note, nor-mally this is \OT1/cmtt/m/n/10.95 frontETree->tree \OT1/cmr/m/n/10.95 , [5]) (./proto.tex [6] [7] [8] [9] [10] Overfull \hbox (0.26903pt too wide) in paragraph at lines 411--411 [] \OT1/cmtt/m/n/10.95 int parent[], ChvList *aggList, ChvList *postList, Ch vManager *chvmanager,[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 463--463 [] \OT1/cmtt/m/n/10.95 char inactiveFlag, int ms glvl, FILE *msgFile ) ;[] [11] Overfull \hbox (6.01772pt too wide) in paragraph at lines 529--529 [] \OT1/cmtt/m/n/10.95 char status[], DV *tempDV, int ms glvl, FILE *msgFile) ;[] [12] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 []\OT1/cmtt/m/n/10.95 Chv * FrontMtx_factorInpMtx ( FrontMtx *frontmtx, InpMtx *inpmtx, double tau,[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 [] \OT1/cmtt/m/n/10.95 double cpus[], int stats[], int msgl vl, FILE *msgFile ) ;[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 []\OT1/cmtt/m/n/10.95 Chv * FrontMtx_factorPencil ( FrontMtx *frontmtx, Pencil *pencil, double tau,[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 [] \OT1/cmtt/m/n/10.95 double cpus[], int stats[], int msgl vl, FILE *msgFile ) ;[] [13] Overfull \hbox (2.58154pt too wide) in paragraph at lines 717--725 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 frontmtx\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 mtxA\OT1/cmr/m/n/10.95 , \OT1/ cmtt/m/n/10.95 rowsIVL\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 firstnz\OT1/cmr/ m/n/10.95 , \OT1/cmtt/m/n/10.95 updlist\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 chvmanager\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 status\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 colmap\OT1/cmr/m/n/10.95 , [14] Overfull \hbox (46.25853pt too wide) in paragraph at lines 765--765 [] \OT1/cmtt/m/n/10.95 ChvManager *chvmanager, int msglvl, FILE *msgFile ) ;[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 833--833 []\OT1/cmtt/m/n/10.95 void FrontMtx_postProcess ( FrontMtx *frontmtx, int msgl vl, FILE *msgFile ) ;[] [15] Overfull \hbox (40.50984pt too wide) in paragraph at lines 891--891 []\OT1/cmtt/m/n/10.95 void FrontMtx_splitUpperMatrices ( FrontMtx *frontmtx, i nt msglvl, FILE *msgFile ) ;[] Overfull \hbox (40.50984pt too wide) in paragraph at lines 891--891 []\OT1/cmtt/m/n/10.95 void FrontMtx_splitLowerMatrices ( FrontMtx *frontmtx, i nt msglvl, FILE *msgFile ) ;[] [16] Overfull \hbox (11.7664pt too wide) in paragraph at lines 979--979 []\OT1/cmtt/m/n/10.95 IP ** FrontMtx_forwardSetup ( FrontMtx *frontmtx, int ms glvl, FILE *msgFile ) ;[] Overfull \hbox (17.51509pt too wide) in paragraph at lines 993--993 []\OT1/cmtt/m/n/10.95 IP ** FrontMtx_backwardSetup ( FrontMtx *frontmtx, int m sglvl, FILE *msgFile ) ;[] [17] Overfull \hbox (17.51509pt too wide) in paragraph at lines 1024--1024 [] \OT1/cmtt/m/n/10.95 SubMtxManager *mtxmanager, double cpus[], int m sglvl, FILE *msgFile ) ;[] [18] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 1142. Overfull \hbox (34.76115pt too wide) in paragraph at lines 1165--1165 []\OT1/cmtt/m/n/10.95 void FrontMtx_inertia ( FrontMtx *frontmtx, int *pnneg, int *pnzero, int *pnpos ) ;[] [19] [20]) (./drivers.tex [21] [22]) (./main.ind [23] [24] [25]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (25 pages, 83108 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] psfig: searching ../../FrontMtx/doc/simple.eps for bounding box psfig: including ../../FrontMtx/doc/simple.eps [2] [3]) (./dataStructure.tex [4] Overfull \hbox (12.9766pt too wide) in paragraph at lines 54--59 []\OT1/cmtt/m/n/10.95 Tree *tree \OT1/cmr/m/n/10.95 : Tree ob-ject that holds t he tree of fronts. Note, nor-mally this is \OT1/cmtt/m/n/10.95 frontETree->tree \OT1/cmr/m/n/10.95 , [5]) (./proto.tex [6] [7] [8] [9] [10] Overfull \hbox (0.26903pt too wide) in paragraph at lines 411--411 [] \OT1/cmtt/m/n/10.95 int parent[], ChvList *aggList, ChvList *postList, Ch vManager *chvmanager,[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 463--463 [] \OT1/cmtt/m/n/10.95 char inactiveFlag, int ms glvl, FILE *msgFile ) ;[] [11] Overfull \hbox (6.01772pt too wide) in paragraph at lines 529--529 [] \OT1/cmtt/m/n/10.95 char status[], DV *tempDV, int ms glvl, FILE *msgFile) ;[] [12] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 []\OT1/cmtt/m/n/10.95 Chv * FrontMtx_factorInpMtx ( FrontMtx *frontmtx, InpMtx *inpmtx, double tau,[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 [] \OT1/cmtt/m/n/10.95 double cpus[], int stats[], int msgl vl, FILE *msgFile ) ;[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 []\OT1/cmtt/m/n/10.95 Chv * FrontMtx_factorPencil ( FrontMtx *frontmtx, Pencil *pencil, double tau,[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 610--610 [] \OT1/cmtt/m/n/10.95 double cpus[], int stats[], int msgl vl, FILE *msgFile ) ;[] [13] Overfull \hbox (2.58154pt too wide) in paragraph at lines 717--725 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 frontmtx\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 mtxA\OT1/cmr/m/n/10.95 , \OT1/ cmtt/m/n/10.95 rowsIVL\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 firstnz\OT1/cmr/ m/n/10.95 , \OT1/cmtt/m/n/10.95 updlist\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 chvmanager\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 status\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 colmap\OT1/cmr/m/n/10.95 , [14] Overfull \hbox (46.25853pt too wide) in paragraph at lines 765--765 [] \OT1/cmtt/m/n/10.95 ChvManager *chvmanager, int msglvl, FILE *msgFile ) ;[] Overfull \hbox (0.26903pt too wide) in paragraph at lines 833--833 []\OT1/cmtt/m/n/10.95 void FrontMtx_postProcess ( FrontMtx *frontmtx, int msgl vl, FILE *msgFile ) ;[] [15] Overfull \hbox (40.50984pt too wide) in paragraph at lines 891--891 []\OT1/cmtt/m/n/10.95 void FrontMtx_splitUpperMatrices ( FrontMtx *frontmtx, i nt msglvl, FILE *msgFile ) ;[] Overfull \hbox (40.50984pt too wide) in paragraph at lines 891--891 []\OT1/cmtt/m/n/10.95 void FrontMtx_splitLowerMatrices ( FrontMtx *frontmtx, i nt msglvl, FILE *msgFile ) ;[] [16] Overfull \hbox (11.7664pt too wide) in paragraph at lines 979--979 []\OT1/cmtt/m/n/10.95 IP ** FrontMtx_forwardSetup ( FrontMtx *frontmtx, int ms glvl, FILE *msgFile ) ;[] Overfull \hbox (17.51509pt too wide) in paragraph at lines 993--993 []\OT1/cmtt/m/n/10.95 IP ** FrontMtx_backwardSetup ( FrontMtx *frontmtx, int m sglvl, FILE *msgFile ) ;[] [17] Overfull \hbox (17.51509pt too wide) in paragraph at lines 1024--1024 [] \OT1/cmtt/m/n/10.95 SubMtxManager *mtxmanager, double cpus[], int m sglvl, FILE *msgFile ) ;[] [18] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 1142. Overfull \hbox (34.76115pt too wide) in paragraph at lines 1165--1165 []\OT1/cmtt/m/n/10.95 void FrontMtx_inertia ( FrontMtx *frontmtx, int *pnneg, int *pnzero, int *pnpos ) ;[] [19] [20]) (./drivers.tex [21] [22]) (./main.ind [23] [24] [25]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (25 pages, 83108 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> FrontMtx.ps . [1] [2 <../../FrontMtx/doc/simple.eps>] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 67. LaTeX Warning: Citation `ash98-maxflow' on page 1 undefined on input line 68. [1]) (./dataStructure.tex Overfull \hbox (10.03406pt too wide) in paragraph at lines 20--24 []\OT1/cmtt/m/n/10.95 IV compidsIV \OT1/cmr/m/n/10.95 : an \OT1/cmtt/m/n/10.95 IV \OT1/cmr/m/n/10.95 ob-ject that holds the com-po-nent ids of the in-ter-nal ver-tices --- \OT1/cmtt/m/n/10.95 compids[v] [2]) (./proto.tex [3] [4] [5] LaTeX Warning: Citation `ash97-DDSEP' on page 6 undefined on input line 247. [6] [7] [8] [9]) (./drivers.tex LaTeX Warning: Citation `ash97-DDSEP' on page 10 undefined on input line 16. Overfull \hbox (19.63927pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [10] LaTeX Warning: Citation `ash97-DDSEP' on page 11 undefined on input line 59. Overfull \hbox (19.63927pt too wide) in paragraph at lines 76--81 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 119--124 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [11] Overfull \hbox (19.63927pt too wide) in paragraph at lines 174--179 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [12] Overfull \hbox (19.63927pt too wide) in paragraph at lines 238--243 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [13] [14] [15]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (15 pages, 50864 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 67. LaTeX Warning: Citation `ash98-maxflow' on page 1 undefined on input line 68. [1]) (./dataStructure.tex Overfull \hbox (10.03406pt too wide) in paragraph at lines 20--24 []\OT1/cmtt/m/n/10.95 IV compidsIV \OT1/cmr/m/n/10.95 : an \OT1/cmtt/m/n/10.95 IV \OT1/cmr/m/n/10.95 ob-ject that holds the com-po-nent ids of the in-ter-nal ver-tices --- \OT1/cmtt/m/n/10.95 compids[v] [2]) (./proto.tex [3] [4] [5] LaTeX Warning: Citation `ash97-DDSEP' on page 6 undefined on input line 247. [6] [7] [8] [9]) (./drivers.tex LaTeX Warning: Citation `ash97-DDSEP' on page 10 undefined on input line 16. Overfull \hbox (19.63927pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [10] LaTeX Warning: Citation `ash97-DDSEP' on page 11 undefined on input line 59. Overfull \hbox (19.63927pt too wide) in paragraph at lines 76--81 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 119--124 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [11] Overfull \hbox (19.63927pt too wide) in paragraph at lines 174--179 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [12] Overfull \hbox (19.63927pt too wide) in paragraph at lines 238--243 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [13] [14] [15]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (15 pages, 50864 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 67. LaTeX Warning: Citation `ash98-maxflow' on page 1 undefined on input line 68. [1]) (./dataStructure.tex Overfull \hbox (10.03406pt too wide) in paragraph at lines 20--24 []\OT1/cmtt/m/n/10.95 IV compidsIV \OT1/cmr/m/n/10.95 : an \OT1/cmtt/m/n/10.95 IV \OT1/cmr/m/n/10.95 ob-ject that holds the com-po-nent ids of the in-ter-nal ver-tices --- \OT1/cmtt/m/n/10.95 compids[v] [2]) (./proto.tex [3] [4] [5] LaTeX Warning: Citation `ash97-DDSEP' on page 6 undefined on input line 247. [6] [7] [8] [9]) (./drivers.tex LaTeX Warning: Citation `ash97-DDSEP' on page 10 undefined on input line 16. Overfull \hbox (19.63927pt too wide) in paragraph at lines 30--35 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [10] LaTeX Warning: Citation `ash97-DDSEP' on page 11 undefined on input line 59. Overfull \hbox (19.63927pt too wide) in paragraph at lines 76--81 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 119--124 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [11] Overfull \hbox (19.63927pt too wide) in paragraph at lines 174--179 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [12] Overfull \hbox (19.63927pt too wide) in paragraph at lines 238--243 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [13] [14] [15]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (15 pages, 50864 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> GPart.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 24. LaTeX Warning: Citation `ash95-compressed-graphs' on page 1 undefined on input line 59. LaTeX Warning: Citation `dam92-compressed' on page 1 undefined on input line 60 . [1]) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [2] Overfull \hbox (22.0743pt too wide) in paragraph at lines 92--100 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Graph[]clearData()\OT1/cmr/m/n /10.95 . [3] [4] [5] Overfull \hbox (11.7664pt too wide) in paragraph at lines 360--360 []\OT1/cmtt/m/n/10.95 Graph * Graph_subGraph ( Graph *graph, int icomp, int co mpids[], int **pmap ) ;[] [6] [7]) (./drivers.tex Overfull \hbox (19.63927pt too wide) in paragraph at lines 28--32 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [8] Overfull \hbox (19.63927pt too wide) in paragraph at lines 55--60 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 105--110 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [9] Overfull \hbox (19.63927pt too wide) in paragraph at lines 185--190 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (15.38101pt too wide) in paragraph at lines 190--194 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s writ-ten to the file via the \OT1/cmtt/m/n/10.95 Graph[]writeToFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 216--220 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [10] Overfull \hbox (19.63927pt too wide) in paragraph at lines 247--252 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() psfig: searching ../../Graph/doc/rad1.eps for bounding box psfig: including ../../Graph/doc/rad1.eps psfig: searching ../../Graph/doc/rad2.eps for bounding box psfig: including ../../Graph/doc/rad2.eps Underfull \vbox (badness 10000) has occurred while \output is active [11] Overfull \hbox (19.63927pt too wide) in paragraph at lines 301--306 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [12] [13]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 43592 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 24. LaTeX Warning: Citation `ash95-compressed-graphs' on page 1 undefined on input line 59. LaTeX Warning: Citation `dam92-compressed' on page 1 undefined on input line 60 . [1]) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [2] Overfull \hbox (22.0743pt too wide) in paragraph at lines 92--100 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Graph[]clearData()\OT1/cmr/m/n /10.95 . [3] [4] [5] Overfull \hbox (11.7664pt too wide) in paragraph at lines 360--360 []\OT1/cmtt/m/n/10.95 Graph * Graph_subGraph ( Graph *graph, int icomp, int co mpids[], int **pmap ) ;[] [6] [7]) (./drivers.tex Overfull \hbox (19.63927pt too wide) in paragraph at lines 28--32 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [8] Overfull \hbox (19.63927pt too wide) in paragraph at lines 55--60 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 105--110 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [9] Overfull \hbox (19.63927pt too wide) in paragraph at lines 185--190 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (15.38101pt too wide) in paragraph at lines 190--194 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s writ-ten to the file via the \OT1/cmtt/m/n/10.95 Graph[]writeToFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 216--220 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [10] Overfull \hbox (19.63927pt too wide) in paragraph at lines 247--252 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() psfig: searching ../../Graph/doc/rad1.eps for bounding box psfig: including ../../Graph/doc/rad1.eps psfig: searching ../../Graph/doc/rad2.eps for bounding box psfig: including ../../Graph/doc/rad2.eps Underfull \vbox (badness 10000) has occurred while \output is active [11] Overfull \hbox (19.63927pt too wide) in paragraph at lines 301--306 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [12] [13]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 43592 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `ash97-DDSEP' on page 1 undefined on input line 24. LaTeX Warning: Citation `ash95-compressed-graphs' on page 1 undefined on input line 59. LaTeX Warning: Citation `dam92-compressed' on page 1 undefined on input line 60 . [1]) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [2] Overfull \hbox (22.0743pt too wide) in paragraph at lines 92--100 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Graph[]clearData()\OT1/cmr/m/n /10.95 . [3] [4] [5] Overfull \hbox (11.7664pt too wide) in paragraph at lines 360--360 []\OT1/cmtt/m/n/10.95 Graph * Graph_subGraph ( Graph *graph, int icomp, int co mpids[], int **pmap ) ;[] [6] [7]) (./drivers.tex Overfull \hbox (19.63927pt too wide) in paragraph at lines 28--32 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [8] Overfull \hbox (19.63927pt too wide) in paragraph at lines 55--60 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 105--110 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [9] Overfull \hbox (19.63927pt too wide) in paragraph at lines 185--190 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() Overfull \hbox (15.38101pt too wide) in paragraph at lines 190--194 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s writ-ten to the file via the \OT1/cmtt/m/n/10.95 Graph[]writeToFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 216--220 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [10] Overfull \hbox (19.63927pt too wide) in paragraph at lines 247--252 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() psfig: searching ../../Graph/doc/rad1.eps for bounding box psfig: including ../../Graph/doc/rad1.eps psfig: searching ../../Graph/doc/rad2.eps for bounding box psfig: including ../../Graph/doc/rad2.eps Underfull \vbox (badness 10000) has occurred while \output is active [11] Overfull \hbox (19.63927pt too wide) in paragraph at lines 301--306 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() ) (./main.ind [12] [13]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 43592 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Graph.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12<../../Graph/doc/rad1.eps> <../../Graph/doc/rad2.eps>] [13] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1]) (./proto.tex [2] Overfull \hbox (6.01772pt too wide) in paragraph at lines 103--103 []\OT1/cmtt/m/n/10.95 void I2Ohash_insert ( I2Ohash *hashtable, int key1, int key2, void * value ) ;[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 114--114 []\OT1/cmtt/m/n/10.95 int I2Ohash_locate ( I2Ohash *hashtable, int key1, int k ey2, void **pvalue ) ;[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 128--128 []\OT1/cmtt/m/n/10.95 int I2Ohash_remove ( I2Ohash *hashtable, int key1, int k ey2, void **pvalue ) ;[] ) (./drivers.tex [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 12284 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1]) (./proto.tex [2] Overfull \hbox (6.01772pt too wide) in paragraph at lines 103--103 []\OT1/cmtt/m/n/10.95 void I2Ohash_insert ( I2Ohash *hashtable, int key1, int key2, void * value ) ;[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 114--114 []\OT1/cmtt/m/n/10.95 int I2Ohash_locate ( I2Ohash *hashtable, int key1, int k ey2, void **pvalue ) ;[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 128--128 []\OT1/cmtt/m/n/10.95 int I2Ohash_remove ( I2Ohash *hashtable, int key1, int k ey2, void **pvalue ) ;[] ) (./drivers.tex [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 12284 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1]) (./proto.tex [2] Overfull \hbox (6.01772pt too wide) in paragraph at lines 103--103 []\OT1/cmtt/m/n/10.95 void I2Ohash_insert ( I2Ohash *hashtable, int key1, int key2, void * value ) ;[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 114--114 []\OT1/cmtt/m/n/10.95 int I2Ohash_locate ( I2Ohash *hashtable, int key1, int k ey2, void **pvalue ) ;[] Overfull \hbox (6.01772pt too wide) in paragraph at lines 128--128 []\OT1/cmtt/m/n/10.95 int I2Ohash_remove ( I2Ohash *hashtable, int key1, int k ey2, void **pvalue ) ;[] ) (./drivers.tex [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 12284 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> I2Ohash.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2]) (./main.ind [3] [4]) (./main.aux) ) Output written on main.dvi (4 pages, 7520 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2]) (./main.ind [3] [4]) (./main.aux) ) Output written on main.dvi (4 pages, 7520 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2]) (./main.ind [3] [4]) (./main.aux) ) Output written on main.dvi (4 pages, 7520 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> IIheap.ps . [1] [2] [3] [4] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 52. ) (./dataStructure.tex [1]) (./proto.tex [2] [3] Overfull \hbox (18.7287pt too wide) in paragraph at lines 208--214 []\OT1/cmr/m/n/10.95 This is the to-tal ini-tial-iza-tion method. Any pre-vi-ou s data is cleared with a call to \OT1/cmtt/m/n/10.95 IV[]clearData()\OT1/cmr/m/ n/10.95 . [4] [5] [6] [7] Overfull \hbox (28.58224pt too wide) in paragraph at lines 632--639 []\OT1/cmr/m/n/10.95 This method writes an \OT1/cmtt/m/n/10.95 IV \OT1/cmr/m/n/ 10.95 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n /10.95 IV[]writeStats() [8]) (./drivers.tex) (./main.ind [9] [10]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on main.dvi (10 pages, 32012 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 52. ) (./dataStructure.tex [1]) (./proto.tex [2] [3] Overfull \hbox (18.7287pt too wide) in paragraph at lines 208--214 []\OT1/cmr/m/n/10.95 This is the to-tal ini-tial-iza-tion method. Any pre-vi-ou s data is cleared with a call to \OT1/cmtt/m/n/10.95 IV[]clearData()\OT1/cmr/m/ n/10.95 . [4] [5] [6] [7] Overfull \hbox (28.58224pt too wide) in paragraph at lines 632--639 []\OT1/cmr/m/n/10.95 This method writes an \OT1/cmtt/m/n/10.95 IV \OT1/cmr/m/n/ 10.95 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n /10.95 IV[]writeStats() [8]) (./drivers.tex) (./main.ind [9] [10]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (10 pages, 32012 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 52. ) (./dataStructure.tex [1]) (./proto.tex [2] [3] Overfull \hbox (18.7287pt too wide) in paragraph at lines 208--214 []\OT1/cmr/m/n/10.95 This is the to-tal ini-tial-iza-tion method. Any pre-vi-ou s data is cleared with a call to \OT1/cmtt/m/n/10.95 IV[]clearData()\OT1/cmr/m/ n/10.95 . [4] [5] [6] [7] Overfull \hbox (28.58224pt too wide) in paragraph at lines 632--639 []\OT1/cmr/m/n/10.95 This method writes an \OT1/cmtt/m/n/10.95 IV \OT1/cmr/m/n/ 10.95 ob-ject to a file in a hu-man read-able for-mat. The method \OT1/cmtt/m/n /10.95 IV[]writeStats() [8]) (./drivers.tex) (./main.ind [9] [10]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (10 pages, 32012 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> IV.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 51. Overfull \hbox (2.18349pt too wide) in paragraph at lines 63--69 \OT1/cmr/m/n/10.95 list. The \OT1/cmtt/m/n/10.95 sizes \OT1/cmr/m/n/10.95 and \ OT1/cmtt/m/n/10.95 p[]vec \OT1/cmr/m/n/10.95 fields need never be ac-cessed di- rectly --- see the \OT1/cmtt/m/n/10.95 IVL[]listAndSize()\OT1/cmr/m/n/10.95 , ) (./proto.tex [2] [3] Overfull \hbox (46.25853pt too wide) in paragraph at lines 199--199 []\OT1/cmtt/m/n/10.95 int IVL_initFromSubIVL ( IVL *subIVL, IVL *ivl, IV *keep listIV, IV *keepentriesIV ) ;[] Overfull \hbox (2.9712pt too wide) in paragraph at lines 220--229 \OT1/cmtt/m/n/10.95 newmaxnlist == maxnlist\OT1/cmr/m/n/10.95 , noth-ing is don e. Oth-er-wise, new stor-age for \OT1/cmtt/m/n/10.95 sizes[] \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 p[]vec[] [4] Underfull \vbox (badness 10000) has occurred while \output is active [5] [6] LaTeX Warning: Citation `ash95-compressed-graphs' on page 7 undefined on input line 404. [7] [8]) (./drivers.tex [9]) (./main.ind [10] [11]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (11 pages, 33060 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 51. Overfull \hbox (2.18349pt too wide) in paragraph at lines 63--69 \OT1/cmr/m/n/10.95 list. The \OT1/cmtt/m/n/10.95 sizes \OT1/cmr/m/n/10.95 and \ OT1/cmtt/m/n/10.95 p[]vec \OT1/cmr/m/n/10.95 fields need never be ac-cessed di- rectly --- see the \OT1/cmtt/m/n/10.95 IVL[]listAndSize()\OT1/cmr/m/n/10.95 , ) (./proto.tex [2] [3] Overfull \hbox (46.25853pt too wide) in paragraph at lines 199--199 []\OT1/cmtt/m/n/10.95 int IVL_initFromSubIVL ( IVL *subIVL, IVL *ivl, IV *keep listIV, IV *keepentriesIV ) ;[] Overfull \hbox (2.9712pt too wide) in paragraph at lines 220--229 \OT1/cmtt/m/n/10.95 newmaxnlist == maxnlist\OT1/cmr/m/n/10.95 , noth-ing is don e. Oth-er-wise, new stor-age for \OT1/cmtt/m/n/10.95 sizes[] \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 p[]vec[] [4] Underfull \vbox (badness 10000) has occurred while \output is active [5] [6] LaTeX Warning: Citation `ash95-compressed-graphs' on page 7 undefined on input line 404. [7] [8]) (./drivers.tex [9]) (./main.ind [10] [11]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (11 pages, 33060 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 51. Overfull \hbox (2.18349pt too wide) in paragraph at lines 63--69 \OT1/cmr/m/n/10.95 list. The \OT1/cmtt/m/n/10.95 sizes \OT1/cmr/m/n/10.95 and \ OT1/cmtt/m/n/10.95 p[]vec \OT1/cmr/m/n/10.95 fields need never be ac-cessed di- rectly --- see the \OT1/cmtt/m/n/10.95 IVL[]listAndSize()\OT1/cmr/m/n/10.95 , ) (./proto.tex [2] [3] Overfull \hbox (46.25853pt too wide) in paragraph at lines 199--199 []\OT1/cmtt/m/n/10.95 int IVL_initFromSubIVL ( IVL *subIVL, IVL *ivl, IV *keep listIV, IV *keepentriesIV ) ;[] Overfull \hbox (2.9712pt too wide) in paragraph at lines 220--229 \OT1/cmtt/m/n/10.95 newmaxnlist == maxnlist\OT1/cmr/m/n/10.95 , noth-ing is don e. Oth-er-wise, new stor-age for \OT1/cmtt/m/n/10.95 sizes[] \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 p[]vec[] [4] Underfull \vbox (badness 10000) has occurred while \output is active [5] [6] LaTeX Warning: Citation `ash95-compressed-graphs' on page 7 undefined on input line 404. [7] [8]) (./drivers.tex [9]) (./main.ind [10] [11]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (11 pages, 33060 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> IVL.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 10076 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 10076 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 10076 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Ideq.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2] Overfull \hbox (10.7373pt too wide) in paragraph at lines 74--79 []\OT1/cmtt/m/n/10 int maxnvector \OT1/cmr/m/n/10 -- present max-i-mum num-ber of vec-tors. This quan-tity is ini-tial-ized by the \OT1/cmtt/m/n/10 InpMtx[]in it() [3]) (./proto.tex [4] [5] [6] Overfull \hbox (9.61465pt too wide) in paragraph at lines 390--400 []\OT1/cmr/m/n/10 This method changes the co-or-di-nate type. If $[] = []$, the pro-gram re-turns. If $[] \OMS/cmsy/m/n/10 ^^U [7] [8] [9] Overfull \hbox (34.11732pt too wide) in paragraph at lines 734--745 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (6.7411pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector ( InpMtx *A, DenseMtx *Y, doub le alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_T ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_H ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] [10] Overfull \hbox (34.11732pt too wide) in paragraph at lines 787--798 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [11] Overfull \hbox (11.27731pt too wide) in paragraph at lines 964--972 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , Overfull \hbox (11.27731pt too wide) in paragraph at lines 980--988 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , [12] [13] [14] Overfull \hbox (13.68219pt too wide) in paragraph at lines 1411--1418 []\OT1/cmr/m/n/10 This method writes the ob-ject to a file suit-able for read-i ng by a hu-man. The method \OT1/cmtt/m/n/10 InpMtx[]writeStats() [15] Overfull \hbox (10.59344pt too wide) in paragraph at lines 1465--1471 \OT1/cmtt/m/n/10 readHB[]mat[]double() \OT1/cmr/m/n/10 from the Harwell-Boeing C IO rou-tines from NIST[], found in the \OT1/cmtt/m/n/10 misc/src/iohb.c ) (./drivers.tex [16] [17] [18] [19] psfig: searching ../../InpMtx/doc/BCSSTK23.eps for bounding box psfig: including ../../InpMtx/doc/BCSSTK23.eps [20] [21] [22]) (./main.ind [23] [24] [25]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (25 pages, 106084 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2] Overfull \hbox (10.7373pt too wide) in paragraph at lines 74--79 []\OT1/cmtt/m/n/10 int maxnvector \OT1/cmr/m/n/10 -- present max-i-mum num-ber of vec-tors. This quan-tity is ini-tial-ized by the \OT1/cmtt/m/n/10 InpMtx[]in it() [3]) (./proto.tex [4] [5] [6] Overfull \hbox (9.61465pt too wide) in paragraph at lines 390--400 []\OT1/cmr/m/n/10 This method changes the co-or-di-nate type. If $[] = []$, the pro-gram re-turns. If $[] \OMS/cmsy/m/n/10 ^^U [7] [8] [9] Overfull \hbox (34.11732pt too wide) in paragraph at lines 734--745 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (6.7411pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector ( InpMtx *A, DenseMtx *Y, doub le alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_T ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_H ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] [10] Overfull \hbox (34.11732pt too wide) in paragraph at lines 787--798 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [11] Overfull \hbox (11.27731pt too wide) in paragraph at lines 964--972 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , Overfull \hbox (11.27731pt too wide) in paragraph at lines 980--988 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , [12] [13] [14] Overfull \hbox (13.68219pt too wide) in paragraph at lines 1411--1418 []\OT1/cmr/m/n/10 This method writes the ob-ject to a file suit-able for read-i ng by a hu-man. The method \OT1/cmtt/m/n/10 InpMtx[]writeStats() [15] Overfull \hbox (10.59344pt too wide) in paragraph at lines 1465--1471 \OT1/cmtt/m/n/10 readHB[]mat[]double() \OT1/cmr/m/n/10 from the Harwell-Boeing C IO rou-tines from NIST[], found in the \OT1/cmtt/m/n/10 misc/src/iohb.c ) (./drivers.tex [16] [17] [18] [19] psfig: searching ../../InpMtx/doc/BCSSTK23.eps for bounding box psfig: including ../../InpMtx/doc/BCSSTK23.eps [20] [21] [22]) (./main.ind [23] [24] [25]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (25 pages, 106084 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2] Overfull \hbox (10.7373pt too wide) in paragraph at lines 74--79 []\OT1/cmtt/m/n/10 int maxnvector \OT1/cmr/m/n/10 -- present max-i-mum num-ber of vec-tors. This quan-tity is ini-tial-ized by the \OT1/cmtt/m/n/10 InpMtx[]in it() [3]) (./proto.tex [4] [5] [6] Overfull \hbox (9.61465pt too wide) in paragraph at lines 390--400 []\OT1/cmr/m/n/10 This method changes the co-or-di-nate type. If $[] = []$, the pro-gram re-turns. If $[] \OMS/cmsy/m/n/10 ^^U [7] [8] [9] Overfull \hbox (34.11732pt too wide) in paragraph at lines 734--745 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , Overfull \hbox (6.7411pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector ( InpMtx *A, DenseMtx *Y, doub le alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_T ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] Overfull \hbox (17.24101pt too wide) in paragraph at lines 751--751 []\OT1/cmtt/m/n/10 void InpMtx_nonsym_mmmVector_H ( InpMtx *A, DenseMtx *Y, do uble alpha[], DenseMtx *X ) ;[] [10] Overfull \hbox (34.11732pt too wide) in paragraph at lines 787--798 \OT1/cmtt/m/n/10 INPMTX[]BY[]CHEVRONS\OT1/cmr/m/n/10 , or if \OT1/cmtt/m/n/10 s torageMode \OT1/cmr/m/n/10 is not one of \OT1/cmtt/m/n/10 INPMTX[]RAW[]DATA\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 INPMTX[]SORTED \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/ 10 INPMTX[]BY[]VECTORS\OT1/cmr/m/n/10 , [11] Overfull \hbox (11.27731pt too wide) in paragraph at lines 964--972 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , Overfull \hbox (11.27731pt too wide) in paragraph at lines 980--988 \OT1/cmr/m/it/10 Error check-ing: \OT1/cmr/m/n/10 If \OT1/cmtt/m/n/10 inpmtxA \ OT1/cmr/m/n/10 is \OT1/cmtt/m/n/10 NULL\OT1/cmr/m/n/10 , or if the co-or-di-nat e type is not \OT1/cmtt/m/n/10 INPMTX[]BY[]ROWS \OT1/cmr/m/n/10 or \OT1/cmtt/m/ n/10 INPMTX[]BY[]COLUMNS\OT1/cmr/m/n/10 , [12] [13] [14] Overfull \hbox (13.68219pt too wide) in paragraph at lines 1411--1418 []\OT1/cmr/m/n/10 This method writes the ob-ject to a file suit-able for read-i ng by a hu-man. The method \OT1/cmtt/m/n/10 InpMtx[]writeStats() [15] Overfull \hbox (10.59344pt too wide) in paragraph at lines 1465--1471 \OT1/cmtt/m/n/10 readHB[]mat[]double() \OT1/cmr/m/n/10 from the Harwell-Boeing C IO rou-tines from NIST[], found in the \OT1/cmtt/m/n/10 misc/src/iohb.c ) (./drivers.tex [16] [17] [18] [19] psfig: searching ../../InpMtx/doc/BCSSTK23.eps for bounding box psfig: including ../../InpMtx/doc/BCSSTK23.eps [20] [21] [22]) (./main.ind [23] [24] [25]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (25 pages, 106084 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> InpMtx.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21<../../InpMtx/doc/BCSSTK23.eps>] [22] [23] [24] [25] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (64.38225pt too wide) in paragraph at lines 40--47 []\OT1/cmr/m/n/10.95 This method clears the data for the ob-ject. If \OT1/cmtt/ m/n/10.95 lock->mutex \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 NULL\OT1/cm r/m/n/10.95 , then \OT1/cmtt/m/n/10.95 mutex[]destroy(lock->mutex) Overfull \hbox (16.63823pt too wide) in paragraph at lines 40--47 \OT1/cmr/m/n/10.95 (for the POSIX thread pack-age), The method con-cludes with a call to \OT1/cmtt/m/n/10.95 Lock[]setDefaultFields()\OT1/cmr/m/n/10.95 . Overfull \hbox (16.3256pt too wide) in paragraph at lines 76--85 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Lock[]clearData()\OT1/cmr/m/n/ 10.95 . [2]) (./main.ind [3] [4]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (4 pages, 6912 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (64.38225pt too wide) in paragraph at lines 40--47 []\OT1/cmr/m/n/10.95 This method clears the data for the ob-ject. If \OT1/cmtt/ m/n/10.95 lock->mutex \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 NULL\OT1/cm r/m/n/10.95 , then \OT1/cmtt/m/n/10.95 mutex[]destroy(lock->mutex) Overfull \hbox (16.63823pt too wide) in paragraph at lines 40--47 \OT1/cmr/m/n/10.95 (for the POSIX thread pack-age), The method con-cludes with a call to \OT1/cmtt/m/n/10.95 Lock[]setDefaultFields()\OT1/cmr/m/n/10.95 . Overfull \hbox (16.3256pt too wide) in paragraph at lines 76--85 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Lock[]clearData()\OT1/cmr/m/n/ 10.95 . [2]) (./main.ind [3] [4]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (4 pages, 6912 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (64.38225pt too wide) in paragraph at lines 40--47 []\OT1/cmr/m/n/10.95 This method clears the data for the ob-ject. If \OT1/cmtt/ m/n/10.95 lock->mutex \OT1/cmr/m/n/10.95 is not \OT1/cmtt/m/n/10.95 NULL\OT1/cm r/m/n/10.95 , then \OT1/cmtt/m/n/10.95 mutex[]destroy(lock->mutex) Overfull \hbox (16.63823pt too wide) in paragraph at lines 40--47 \OT1/cmr/m/n/10.95 (for the POSIX thread pack-age), The method con-cludes with a call to \OT1/cmtt/m/n/10.95 Lock[]setDefaultFields()\OT1/cmr/m/n/10.95 . Overfull \hbox (16.3256pt too wide) in paragraph at lines 76--85 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Lock[]clearData()\OT1/cmr/m/n/ 10.95 . [2]) (./main.ind [3] [4]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (4 pages, 6912 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Lock.ps . [1] [2] [3] [4] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ame96-amd' on page 1 undefined on input line 49. LaTeX Warning: Citation `sparsematlab' on page 1 undefined on input line 49. LaTeX Warning: Citation `ame96-amd' on page 1 undefined on input line 52. LaTeX Warning: Citation `ng96-mindefIdaho' on page 1 undefined on input line 60 . LaTeX Warning: Citation `rot96-mindefIdaho' on page 1 undefined on input line 6 1. LaTeX Warning: Citation `rot98-mindef' on page 1 undefined on input line 62. [1]) (./dataStructure.tex [2] LaTeX Warning: Citation `ame96-amd' on page 3 undefined on input line 71. LaTeX Warning: Citation `ame96-amd' on page 3 undefined on input line 85. [3] [4] [5]) (./proto.tex [6] [7] [8] [9] Overfull \hbox (11.7664pt too wide) in paragraph at lines 413--413 []\OT1/cmtt/m/n/10.95 void MSMD_makeSchurComplement ( MSMD *msmd, Graph *schur Graph, IV *VtoPhiIV ) ;[] ) (./drivers.tex [10] Overfull \hbox (19.63927pt too wide) in paragraph at lines 28--33 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [11]) (./main.ind [12] [13]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 38332 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ame96-amd' on page 1 undefined on input line 49. LaTeX Warning: Citation `sparsematlab' on page 1 undefined on input line 49. LaTeX Warning: Citation `ame96-amd' on page 1 undefined on input line 52. LaTeX Warning: Citation `ng96-mindefIdaho' on page 1 undefined on input line 60 . LaTeX Warning: Citation `rot96-mindefIdaho' on page 1 undefined on input line 6 1. LaTeX Warning: Citation `rot98-mindef' on page 1 undefined on input line 62. [1]) (./dataStructure.tex [2] LaTeX Warning: Citation `ame96-amd' on page 3 undefined on input line 71. LaTeX Warning: Citation `ame96-amd' on page 3 undefined on input line 85. [3] [4] [5]) (./proto.tex [6] [7] [8] [9] Overfull \hbox (11.7664pt too wide) in paragraph at lines 413--413 []\OT1/cmtt/m/n/10.95 void MSMD_makeSchurComplement ( MSMD *msmd, Graph *schur Graph, IV *VtoPhiIV ) ;[] ) (./drivers.tex [10] Overfull \hbox (19.63927pt too wide) in paragraph at lines 28--33 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [11]) (./main.ind [12] [13]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 38332 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) LaTeX Warning: Citation `ame96-amd' on page 1 undefined on input line 49. LaTeX Warning: Citation `sparsematlab' on page 1 undefined on input line 49. LaTeX Warning: Citation `ame96-amd' on page 1 undefined on input line 52. LaTeX Warning: Citation `ng96-mindefIdaho' on page 1 undefined on input line 60 . LaTeX Warning: Citation `rot96-mindefIdaho' on page 1 undefined on input line 6 1. LaTeX Warning: Citation `rot98-mindef' on page 1 undefined on input line 62. [1]) (./dataStructure.tex [2] LaTeX Warning: Citation `ame96-amd' on page 3 undefined on input line 71. LaTeX Warning: Citation `ame96-amd' on page 3 undefined on input line 85. [3] [4] [5]) (./proto.tex [6] [7] [8] [9] Overfull \hbox (11.7664pt too wide) in paragraph at lines 413--413 []\OT1/cmtt/m/n/10.95 void MSMD_makeSchurComplement ( MSMD *msmd, Graph *schur Graph, IV *VtoPhiIV ) ;[] ) (./drivers.tex [10] Overfull \hbox (19.63927pt too wide) in paragraph at lines 28--33 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [11]) (./main.ind [12] [13]) (./main.aux) LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 38332 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> MSMD.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2]) (./proto.tex [3] [4] Overfull \hbox (0.26903pt too wide) in paragraph at lines 187--187 []\OT1/cmtt/m/n/10.95 void Network_findMincutFromSource ( Network *network, Id eq deq, int mark[]) ;[] [5] Overfull \hbox (55.59328pt too wide) in paragraph at lines 232--238 []\OT1/cmr/m/n/10.95 This method writes the net-work to a file in a hu-man read -able for-mat. The method \OT1/cmtt/m/n/10.95 Network[]writeStats() ) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 19052 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2]) (./proto.tex [3] [4] Overfull \hbox (0.26903pt too wide) in paragraph at lines 187--187 []\OT1/cmtt/m/n/10.95 void Network_findMincutFromSource ( Network *network, Id eq deq, int mark[]) ;[] [5] Overfull \hbox (55.59328pt too wide) in paragraph at lines 232--238 []\OT1/cmr/m/n/10.95 This method writes the net-work to a file in a hu-man read -able for-mat. The method \OT1/cmtt/m/n/10.95 Network[]writeStats() ) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 19052 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2]) (./proto.tex [3] [4] Overfull \hbox (0.26903pt too wide) in paragraph at lines 187--187 []\OT1/cmtt/m/n/10.95 void Network_findMincutFromSource ( Network *network, Id eq deq, int mark[]) ;[] [5] Overfull \hbox (55.59328pt too wide) in paragraph at lines 232--238 []\OT1/cmr/m/n/10.95 This method writes the net-work to a file in a hu-man read -able for-mat. The method \OT1/cmtt/m/n/10.95 Network[]writeStats() ) (./main.ind [6] [7]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (7 pages, 19052 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Network.ps . [1] [2] [3] [4] [5] [6] [7] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] Overfull \hbox (11.7664pt too wide) in paragraph at lines 80--80 []\OT1/cmtt/m/n/10.95 void PatchAndGoInfo_init ( PatchAndGoInfo *info, int str ategy, double toosmall,[] ) (./main.ind [3] [4]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (4 pages, 9636 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] Overfull \hbox (11.7664pt too wide) in paragraph at lines 80--80 []\OT1/cmtt/m/n/10.95 void PatchAndGoInfo_init ( PatchAndGoInfo *info, int str ategy, double toosmall,[] ) (./main.ind [3] [4]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (4 pages, 9636 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] Overfull \hbox (11.7664pt too wide) in paragraph at lines 80--80 []\OT1/cmtt/m/n/10.95 void PatchAndGoInfo_init ( PatchAndGoInfo *info, int str ategy, double toosmall,[] ) (./main.ind [3] [4]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (4 pages, 9636 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> PatchAndGoInfo.ps . [1] [2] [3] [4] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 33. Overfull \hbox (54.03828pt too wide) in paragraph at lines 46--50 \OT1/cmr/m/n/10.95 method for the \OT1/cmtt/m/n/10.95 inpmtxA \OT1/cmr/m/n/10.9 5 and \OT1/cmtt/m/n/10.95 inpmtxB \OT1/cmr/m/n/10.95 ob-jects. There is a con-c lud-ing call to \OT1/cmtt/m/n/10.95 Pencil[]setDefaultFields()\OT1/cmr/m/n/10.9 5 . [2] [3]) (./main.ind [4] [5]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11292 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 33. Overfull \hbox (54.03828pt too wide) in paragraph at lines 46--50 \OT1/cmr/m/n/10.95 method for the \OT1/cmtt/m/n/10.95 inpmtxA \OT1/cmr/m/n/10.9 5 and \OT1/cmtt/m/n/10.95 inpmtxB \OT1/cmr/m/n/10.95 ob-jects. There is a con-c lud-ing call to \OT1/cmtt/m/n/10.95 Pencil[]setDefaultFields()\OT1/cmr/m/n/10.9 5 . [2] [3]) (./main.ind [4] [5]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11292 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 33. Overfull \hbox (54.03828pt too wide) in paragraph at lines 46--50 \OT1/cmr/m/n/10.95 method for the \OT1/cmtt/m/n/10.95 inpmtxA \OT1/cmr/m/n/10.9 5 and \OT1/cmtt/m/n/10.95 inpmtxB \OT1/cmr/m/n/10.95 ob-jects. There is a con-c lud-ing call to \OT1/cmtt/m/n/10.95 Pencil[]setDefaultFields()\OT1/cmr/m/n/10.9 5 . [2] [3]) (./main.ind [4] [5]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11292 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Pencil.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (13.06998pt too wide) in paragraph at lines 42--49 \OT1/cmr/m/n/10.95 to \OT1/cmtt/m/n/10.95 IVfree()\OT1/cmr/m/n/10.95 . The stru c-ture's de-fault fields are then set with a call to \OT1/cmtt/m/n/10.95 Perm[] setDefaultFields()\OT1/cmr/m/n/10.95 . Overfull \hbox (22.10481pt too wide) in paragraph at lines 80--90 []\OT1/cmr/m/n/10.95 This method is the pri-mary ini-tial-izer. It clears any p re-vi-ous data with a call to \OT1/cmtt/m/n/10.95 Perm[]clearData()\OT1/cmr/m/n /10.95 . [2] [3] [4]) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 13648 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (13.06998pt too wide) in paragraph at lines 42--49 \OT1/cmr/m/n/10.95 to \OT1/cmtt/m/n/10.95 IVfree()\OT1/cmr/m/n/10.95 . The stru c-ture's de-fault fields are then set with a call to \OT1/cmtt/m/n/10.95 Perm[] setDefaultFields()\OT1/cmr/m/n/10.95 . Overfull \hbox (22.10481pt too wide) in paragraph at lines 80--90 []\OT1/cmr/m/n/10.95 This method is the pri-mary ini-tial-izer. It clears any p re-vi-ous data with a call to \OT1/cmtt/m/n/10.95 Perm[]clearData()\OT1/cmr/m/n /10.95 . [2] [3] [4]) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 13648 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] Overfull \hbox (13.06998pt too wide) in paragraph at lines 42--49 \OT1/cmr/m/n/10.95 to \OT1/cmtt/m/n/10.95 IVfree()\OT1/cmr/m/n/10.95 . The stru c-ture's de-fault fields are then set with a call to \OT1/cmtt/m/n/10.95 Perm[] setDefaultFields()\OT1/cmr/m/n/10.95 . Overfull \hbox (22.10481pt too wide) in paragraph at lines 80--90 []\OT1/cmr/m/n/10.95 This method is the pri-mary ini-tial-izer. It clears any p re-vi-ous data with a call to \OT1/cmtt/m/n/10.95 Perm[]clearData()\OT1/cmr/m/n /10.95 . [2] [3] [4]) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 13648 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Perm.ps . [1] [2] [3] [4] [5] [6] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1] Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . ) (./proto.tex Overfull \hbox (7.96838pt too wide) in paragraph at lines 32--41 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns \OT1/cmr/m/n/10 = 0, \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [2] [3]) (./drivers.tex [4] Overfull \hbox (2.85498pt too wide) in paragraph at lines 111--114 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject is read from the \OT1/cmtt/m/n/10 inFrontMtxFile \OT1/cmr/m/n/10 file, which must be o f the form \OT1/cmtt/m/n/10 *.frontmtxf ) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 21264 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1] Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . ) (./proto.tex Overfull \hbox (7.96838pt too wide) in paragraph at lines 32--41 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns \OT1/cmr/m/n/10 = 0, \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [2] [3]) (./drivers.tex [4] Overfull \hbox (2.85498pt too wide) in paragraph at lines 111--114 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject is read from the \OT1/cmtt/m/n/10 inFrontMtxFile \OT1/cmr/m/n/10 file, which must be o f the form \OT1/cmtt/m/n/10 *.frontmtxf ) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 21264 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texmf-texlive/tex/latex/amsmath/amstext.sty (/usr/share/texmf-texlive/tex/latex/amsmath/amsgen.sty)) (/usr/share/texmf-texlive/tex/latex/amsmath/amsbsy.sty) (/usr/share/texmf-texlive/tex/latex/amsmath/amsopn.sty)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1] Overfull \hbox (59.24767pt too wide) in paragraph at lines 14--18 []\OT1/cmtt/m/n/10 int symmetryflag \OT1/cmr/m/n/10 : type of ma-trix sym-me-tr y, \OT1/cmtt/m/n/10 SPOOLES[]SYMMETRIC\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 SPOOLE S[]HERMITIAN \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 SPOOLES[]NONSYMMETRIC\OT1/cmr/ m/n/10 . ) (./proto.tex Overfull \hbox (7.96838pt too wide) in paragraph at lines 32--41 []\OT1/cmr/m/n/10 This method sets the struc-ture's fields to de-fault val-ues: \OT1/cmtt/m/n/10 neqns \OT1/cmr/m/n/10 = 0, \OT1/cmtt/m/n/10 type \OT1/cmr/m/n /10 = \OT1/cmtt/m/n/10 SPOOLES[]REAL\OT1/cmr/m/n/10 , \OT1/cmtt/m/n/10 symmetry flag [2] [3]) (./drivers.tex [4] Overfull \hbox (2.85498pt too wide) in paragraph at lines 111--114 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 FrontMtx \OT1/cmr/m/n/10 ob-ject is read from the \OT1/cmtt/m/n/10 inFrontMtxFile \OT1/cmr/m/n/10 file, which must be o f the form \OT1/cmtt/m/n/10 *.frontmtxf ) (./main.ind [5] [6]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (6 pages, 21264 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> SemiImplMtx.ps . [1] [2] [3] [4] [5] [6] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex [2] [3] Overfull \hbox (6.01772pt too wide) in paragraph at lines 244--244 [] \OT1/cmtt/m/n/10.95 IV *ownersIV, int seed, int ms glvl, FILE *msgFile) ;[] [4] [5] Overfull \hbox (12.09367pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10.95 There are the usual eight IO rou-tines. The file struc-ture of a \OT1/cmtt/m/n/10.95 SolveMap \OT1/cmr/m/n/10.95 ob-ject is sim-ple: \OT1/c mtt/m/n/10.95 symmetryflag\OT1/cmr/m/n/10.95 , Overfull \hbox (38.8074pt too wide) in paragraph at lines 391--404 \OT1/cmtt/m/n/10.95 nfront\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nproc\OT1/cm r/m/n/10.95 , \OT1/cmtt/m/n/10.95 nblockUpper \OT1/cmr/m/n/10.95 and \OT1/cmtt/ m/n/10.95 nblockLower\OT1/cmr/m/n/10.95 , fol-lowed by \OT1/cmtt/m/n/10.95 owne rs[*]\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 rowidsUpper[*]\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 colidsUpper[*] Overfull \hbox (9.06282pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 mapidsUpper[*]\OT1/cmr/m/n/10.95 , a nd if \OT1/cmtt/m/n/10.95 symmetryflag = SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10.9 5 , fol-lowed by \OT1/cmtt/m/n/10.95 rowidsLower[*]\OT1/cmr/m/n/10.95 , Overfull \hbox (2.1913pt too wide) in paragraph at lines 414--420 \OT1/cmr/m/n/10.95 the method calls \OT1/cmtt/m/n/10.95 SolveMap[]readFromForma ttedFile() \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 SolveMap[]readFromBinaryFi le()\OT1/cmr/m/n/10.95 , [6]) (./main.ind [7] [8]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 22712 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex [2] [3] Overfull \hbox (6.01772pt too wide) in paragraph at lines 244--244 [] \OT1/cmtt/m/n/10.95 IV *ownersIV, int seed, int ms glvl, FILE *msgFile) ;[] [4] [5] Overfull \hbox (12.09367pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10.95 There are the usual eight IO rou-tines. The file struc-ture of a \OT1/cmtt/m/n/10.95 SolveMap \OT1/cmr/m/n/10.95 ob-ject is sim-ple: \OT1/c mtt/m/n/10.95 symmetryflag\OT1/cmr/m/n/10.95 , Overfull \hbox (38.8074pt too wide) in paragraph at lines 391--404 \OT1/cmtt/m/n/10.95 nfront\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nproc\OT1/cm r/m/n/10.95 , \OT1/cmtt/m/n/10.95 nblockUpper \OT1/cmr/m/n/10.95 and \OT1/cmtt/ m/n/10.95 nblockLower\OT1/cmr/m/n/10.95 , fol-lowed by \OT1/cmtt/m/n/10.95 owne rs[*]\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 rowidsUpper[*]\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 colidsUpper[*] Overfull \hbox (9.06282pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 mapidsUpper[*]\OT1/cmr/m/n/10.95 , a nd if \OT1/cmtt/m/n/10.95 symmetryflag = SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10.9 5 , fol-lowed by \OT1/cmtt/m/n/10.95 rowidsLower[*]\OT1/cmr/m/n/10.95 , Overfull \hbox (2.1913pt too wide) in paragraph at lines 414--420 \OT1/cmr/m/n/10.95 the method calls \OT1/cmtt/m/n/10.95 SolveMap[]readFromForma ttedFile() \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 SolveMap[]readFromBinaryFi le()\OT1/cmr/m/n/10.95 , [6]) (./main.ind [7] [8]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 22712 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./proto.tex [2] [3] Overfull \hbox (6.01772pt too wide) in paragraph at lines 244--244 [] \OT1/cmtt/m/n/10.95 IV *ownersIV, int seed, int ms glvl, FILE *msgFile) ;[] [4] [5] Overfull \hbox (12.09367pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10.95 There are the usual eight IO rou-tines. The file struc-ture of a \OT1/cmtt/m/n/10.95 SolveMap \OT1/cmr/m/n/10.95 ob-ject is sim-ple: \OT1/c mtt/m/n/10.95 symmetryflag\OT1/cmr/m/n/10.95 , Overfull \hbox (38.8074pt too wide) in paragraph at lines 391--404 \OT1/cmtt/m/n/10.95 nfront\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nproc\OT1/cm r/m/n/10.95 , \OT1/cmtt/m/n/10.95 nblockUpper \OT1/cmr/m/n/10.95 and \OT1/cmtt/ m/n/10.95 nblockLower\OT1/cmr/m/n/10.95 , fol-lowed by \OT1/cmtt/m/n/10.95 owne rs[*]\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 rowidsUpper[*]\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 colidsUpper[*] Overfull \hbox (9.06282pt too wide) in paragraph at lines 391--404 \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 mapidsUpper[*]\OT1/cmr/m/n/10.95 , a nd if \OT1/cmtt/m/n/10.95 symmetryflag = SPOOLES[]NONSYMMETRIC\OT1/cmr/m/n/10.9 5 , fol-lowed by \OT1/cmtt/m/n/10.95 rowidsLower[*]\OT1/cmr/m/n/10.95 , Overfull \hbox (2.1913pt too wide) in paragraph at lines 414--420 \OT1/cmr/m/n/10.95 the method calls \OT1/cmtt/m/n/10.95 SolveMap[]readFromForma ttedFile() \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 SolveMap[]readFromBinaryFi le()\OT1/cmr/m/n/10.95 , [6]) (./main.ind [7] [8]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (8 pages, 22712 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> SolveMap.ps . [1] [2] [3] [4] [5] [6] [7] [8] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2] [3]) (./proto.tex Overfull \hbox (47.69849pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 = \OT1/cmtt/m/n/10.95 SPOOLES[]REAL\OT1/ cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 = \OT1/cmtt/m/n/10. 95 DENSEMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10.95 , [4] Overfull \hbox (6.01772pt too wide) in paragraph at lines 157--157 [] \OT1/cmtt/m/n/10.95 int **psizes, int **pindices, double **pentries ) ;[] [5] Overfull \hbox (0.26903pt too wide) in paragraph at lines 179--179 [] \OT1/cmtt/m/n/10.95 int **psizes, int **pindices, double **pentries ) ;[] [6] Overfull \hbox (9.03377pt too wide) in paragraph at lines 278--284 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 mtx\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 pncol \OT1/cmr/m/n/10.95 or \OT1/cm tt/m/n/10.95 pentries \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/ n/10.95 , or if the ma-trix type is not \OT1/cmtt/m/n/10.95 SUBMTX[]DIAGONAL\OT 1/cmr/m/n/10.95 , [7] Overfull \hbox (11.7664pt too wide) in paragraph at lines 426--426 []\OT1/cmtt/m/n/10.95 void SubMtx_initRandom ( SubMtx *mtx, int type, int mode , int rowid, int colid,[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 448--448 [] \OT1/cmtt/m/n/10.95 int rowid, int colid, int nrow, int ncol, int nent, i nt seed, int strict ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 448--448 [] \OT1/cmtt/m/n/10.95 int rowid, int colid, int nrow, int ncol, int nent, i nt seed, int strict ) ;[] [8] [9] Overfull \hbox (6.01772pt too wide) in paragraph at lines 631--631 []\OT1/cmtt/m/n/10.95 int SubMtx_nbytesNeeded ( int type, int mode, int nrow, int ncol, int nent ) ;[] [10] [11] [12]) (./drivers.tex [13] Overfull \hbox (42.63402pt too wide) in paragraph at lines 26--31 \OT1/cmtt/m/n/10.95 *.submtxf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.submt xb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 SubMtx \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 SubMtx[]readFromFile() Overfull \hbox (38.37576pt too wide) in paragraph at lines 31--35 \OT1/cmtt/m/n/10.95 *.submtxf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.submt xb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 SubMtx \OT1/cmr/m/n/10.95 ob-jec t is writ-ten to the file via the \OT1/cmtt/m/n/10.95 SubMtx[]writeToFile() LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 42. Overfull \hbox (11.1399pt too wide) in paragraph at lines 60--65 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 7 (\OT1/cmtt/m/n/10.95 SUBMTX[]DIAGONAL\OT1/cmr/m/n/10.95 ), 8 (\OT1/cmtt/m/n/10.95 SUBMTX[]BLOCK[]DIAGONAL[]SYM\OT1/cmr/m/n/10.95 ) [14] Overfull \hbox (8.43288pt too wide) in paragraph at lines 97--106 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), Overfull \hbox (8.43288pt too wide) in paragraph at lines 142--148 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), [15] Overfull \hbox (8.43288pt too wide) in paragraph at lines 185--191 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), [16] [17]) (./main.ind [18] [19]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (19 pages, 67392 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2] [3]) (./proto.tex Overfull \hbox (47.69849pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 = \OT1/cmtt/m/n/10.95 SPOOLES[]REAL\OT1/ cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 = \OT1/cmtt/m/n/10. 95 DENSEMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10.95 , [4] Overfull \hbox (6.01772pt too wide) in paragraph at lines 157--157 [] \OT1/cmtt/m/n/10.95 int **psizes, int **pindices, double **pentries ) ;[] [5] Overfull \hbox (0.26903pt too wide) in paragraph at lines 179--179 [] \OT1/cmtt/m/n/10.95 int **psizes, int **pindices, double **pentries ) ;[] [6] Overfull \hbox (9.03377pt too wide) in paragraph at lines 278--284 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 mtx\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 pncol \OT1/cmr/m/n/10.95 or \OT1/cm tt/m/n/10.95 pentries \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/ n/10.95 , or if the ma-trix type is not \OT1/cmtt/m/n/10.95 SUBMTX[]DIAGONAL\OT 1/cmr/m/n/10.95 , [7] Overfull \hbox (11.7664pt too wide) in paragraph at lines 426--426 []\OT1/cmtt/m/n/10.95 void SubMtx_initRandom ( SubMtx *mtx, int type, int mode , int rowid, int colid,[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 448--448 [] \OT1/cmtt/m/n/10.95 int rowid, int colid, int nrow, int ncol, int nent, i nt seed, int strict ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 448--448 [] \OT1/cmtt/m/n/10.95 int rowid, int colid, int nrow, int ncol, int nent, i nt seed, int strict ) ;[] [8] [9] Overfull \hbox (6.01772pt too wide) in paragraph at lines 631--631 []\OT1/cmtt/m/n/10.95 int SubMtx_nbytesNeeded ( int type, int mode, int nrow, int ncol, int nent ) ;[] [10] [11] [12]) (./drivers.tex [13] Overfull \hbox (42.63402pt too wide) in paragraph at lines 26--31 \OT1/cmtt/m/n/10.95 *.submtxf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.submt xb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 SubMtx \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 SubMtx[]readFromFile() Overfull \hbox (38.37576pt too wide) in paragraph at lines 31--35 \OT1/cmtt/m/n/10.95 *.submtxf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.submt xb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 SubMtx \OT1/cmr/m/n/10.95 ob-jec t is writ-ten to the file via the \OT1/cmtt/m/n/10.95 SubMtx[]writeToFile() LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 42. Overfull \hbox (11.1399pt too wide) in paragraph at lines 60--65 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 7 (\OT1/cmtt/m/n/10.95 SUBMTX[]DIAGONAL\OT1/cmr/m/n/10.95 ), 8 (\OT1/cmtt/m/n/10.95 SUBMTX[]BLOCK[]DIAGONAL[]SYM\OT1/cmr/m/n/10.95 ) [14] Overfull \hbox (8.43288pt too wide) in paragraph at lines 97--106 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), Overfull \hbox (8.43288pt too wide) in paragraph at lines 142--148 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), [15] Overfull \hbox (8.43288pt too wide) in paragraph at lines 185--191 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), [16] [17]) (./main.ind [18] [19]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (19 pages, 67392 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex [2] [3]) (./proto.tex Overfull \hbox (47.69849pt too wide) in paragraph at lines 32--40 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 type \OT1/cmr/m/n/10.95 = \OT1/cmtt/m/n/10.95 SPOOLES[]REAL\OT1/ cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 = \OT1/cmtt/m/n/10. 95 DENSEMTX[]DENSE[]COLUMNS\OT1/cmr/m/n/10.95 , [4] Overfull \hbox (6.01772pt too wide) in paragraph at lines 157--157 [] \OT1/cmtt/m/n/10.95 int **psizes, int **pindices, double **pentries ) ;[] [5] Overfull \hbox (0.26903pt too wide) in paragraph at lines 179--179 [] \OT1/cmtt/m/n/10.95 int **psizes, int **pindices, double **pentries ) ;[] [6] Overfull \hbox (9.03377pt too wide) in paragraph at lines 278--284 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 mtx\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 pncol \OT1/cmr/m/n/10.95 or \OT1/cm tt/m/n/10.95 pentries \OT1/cmr/m/n/10.95 is \OT1/cmtt/m/n/10.95 NULL\OT1/cmr/m/ n/10.95 , or if the ma-trix type is not \OT1/cmtt/m/n/10.95 SUBMTX[]DIAGONAL\OT 1/cmr/m/n/10.95 , [7] Overfull \hbox (11.7664pt too wide) in paragraph at lines 426--426 []\OT1/cmtt/m/n/10.95 void SubMtx_initRandom ( SubMtx *mtx, int type, int mode , int rowid, int colid,[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 448--448 [] \OT1/cmtt/m/n/10.95 int rowid, int colid, int nrow, int ncol, int nent, i nt seed, int strict ) ;[] Overfull \hbox (11.7664pt too wide) in paragraph at lines 448--448 [] \OT1/cmtt/m/n/10.95 int rowid, int colid, int nrow, int ncol, int nent, i nt seed, int strict ) ;[] [8] [9] Overfull \hbox (6.01772pt too wide) in paragraph at lines 631--631 []\OT1/cmtt/m/n/10.95 int SubMtx_nbytesNeeded ( int type, int mode, int nrow, int ncol, int nent ) ;[] [10] [11] [12]) (./drivers.tex [13] Overfull \hbox (42.63402pt too wide) in paragraph at lines 26--31 \OT1/cmtt/m/n/10.95 *.submtxf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.submt xb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 SubMtx \OT1/cmr/m/n/10.95 ob-jec t is read from the file via the \OT1/cmtt/m/n/10.95 SubMtx[]readFromFile() Overfull \hbox (38.37576pt too wide) in paragraph at lines 31--35 \OT1/cmtt/m/n/10.95 *.submtxf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.submt xb\OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 SubMtx \OT1/cmr/m/n/10.95 ob-jec t is writ-ten to the file via the \OT1/cmtt/m/n/10.95 SubMtx[]writeToFile() LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 42. Overfull \hbox (11.1399pt too wide) in paragraph at lines 60--65 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 7 (\OT1/cmtt/m/n/10.95 SUBMTX[]DIAGONAL\OT1/cmr/m/n/10.95 ), 8 (\OT1/cmtt/m/n/10.95 SUBMTX[]BLOCK[]DIAGONAL[]SYM\OT1/cmr/m/n/10.95 ) [14] Overfull \hbox (8.43288pt too wide) in paragraph at lines 97--106 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), Overfull \hbox (8.43288pt too wide) in paragraph at lines 142--148 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), [15] Overfull \hbox (8.43288pt too wide) in paragraph at lines 185--191 []\OT1/cmr/m/n/10.95 The \OT1/cmtt/m/n/10.95 mode \OT1/cmr/m/n/10.95 pa-ram-e-t er must be one of 2 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]ROWS\OT1/cmr/m/n/10.95 ), 3 (\OT1/cmtt/m/n/10.95 SUBMTX[]SPARSE[]COLUMNS\OT1/cmr/m/n/10.95 ), [16] [17]) (./main.ind [18] [19]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on main.dvi (19 pages, 67392 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> SubMtx.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 11972 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 11972 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [1]) (./dataStructure.tex) (./proto.tex [2] [3]) (./main.ind [4] [5]) (./main.aux) ) Output written on main.dvi (5 pages, 11972 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> SubMtxList.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1] Overfull \hbox (8.41794pt too wide) in paragraph at lines 14--19 []\OT1/cmtt/m/n/10.95 int mode \OT1/cmr/m/n/10.95 : be-hav-ior mode. When \OT1/ cmtt/m/n/10.95 mode = 0\OT1/cmr/m/n/10.95 , the ob-ject calls \OT1/cmtt/m/n/10. 95 SubMtx[]new() \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 SubMtx[]free() ) (./proto.tex Overfull \hbox (14.44592pt too wide) in paragraph at lines 33--44 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 mode\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nactive\OT1/cmr/m/n /10.95 , \OT1/cmtt/m/n/10.95 nbytesactive\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10. 95 nbytesrequested\OT1/cmr/m/n/10.95 , [2] Overfull \hbox (34.76115pt too wide) in paragraph at lines 141--141 []\OT1/cmtt/m/n/10.95 void SubMtxManager_releaseListOfObjects ( SubMtxManager *manager, SubMtx *first ) ;[] [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11708 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1] Overfull \hbox (8.41794pt too wide) in paragraph at lines 14--19 []\OT1/cmtt/m/n/10.95 int mode \OT1/cmr/m/n/10.95 : be-hav-ior mode. When \OT1/ cmtt/m/n/10.95 mode = 0\OT1/cmr/m/n/10.95 , the ob-ject calls \OT1/cmtt/m/n/10. 95 SubMtx[]new() \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 SubMtx[]free() ) (./proto.tex Overfull \hbox (14.44592pt too wide) in paragraph at lines 33--44 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 mode\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nactive\OT1/cmr/m/n /10.95 , \OT1/cmtt/m/n/10.95 nbytesactive\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10. 95 nbytesrequested\OT1/cmr/m/n/10.95 , [2] Overfull \hbox (34.76115pt too wide) in paragraph at lines 141--141 []\OT1/cmtt/m/n/10.95 void SubMtxManager_releaseListOfObjects ( SubMtxManager *manager, SubMtx *first ) ;[] [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11708 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./dataStructure.tex [1] Overfull \hbox (8.41794pt too wide) in paragraph at lines 14--19 []\OT1/cmtt/m/n/10.95 int mode \OT1/cmr/m/n/10.95 : be-hav-ior mode. When \OT1/ cmtt/m/n/10.95 mode = 0\OT1/cmr/m/n/10.95 , the ob-ject calls \OT1/cmtt/m/n/10. 95 SubMtx[]new() \OT1/cmr/m/n/10.95 and \OT1/cmtt/m/n/10.95 SubMtx[]free() ) (./proto.tex Overfull \hbox (14.44592pt too wide) in paragraph at lines 33--44 []\OT1/cmr/m/n/10.95 The struc-ture's fields are set to de-fault val-ues: \OT1/ cmtt/m/n/10.95 mode\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10.95 nactive\OT1/cmr/m/n /10.95 , \OT1/cmtt/m/n/10.95 nbytesactive\OT1/cmr/m/n/10.95 , \OT1/cmtt/m/n/10. 95 nbytesrequested\OT1/cmr/m/n/10.95 , [2] Overfull \hbox (34.76115pt too wide) in paragraph at lines 141--141 []\OT1/cmtt/m/n/10.95 void SubMtxManager_releaseListOfObjects ( SubMtxManager *manager, SubMtx *first ) ;[] [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 11708 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> SubMtxManager.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex) (./proto.tex [1] Overfull \hbox (3.55602pt too wide) in paragraph at lines 31--39 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 etree \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 graph \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if $[] \OML/cmm/m/it/10.95 < \OT1/ cmr/m/n/10.95 1$, or if $[] \OML/cmm/m/it/10.95 < \OT1/cmr/m/n/10.95 1$, or if $[] \OMS/cmsy/m/n/10.95 6\OT1/cmr/m/n/10.95 = ) (./drivers.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [2] Overfull \hbox (19.63927pt too wide) in paragraph at lines 31--37 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 96--102 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 102--108 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 13532 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex) (./proto.tex [1] Overfull \hbox (3.55602pt too wide) in paragraph at lines 31--39 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 etree \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 graph \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if $[] \OML/cmm/m/it/10.95 < \OT1/ cmr/m/n/10.95 1$, or if $[] \OML/cmm/m/it/10.95 < \OT1/cmr/m/n/10.95 1$, or if $[] \OMS/cmsy/m/n/10.95 6\OT1/cmr/m/n/10.95 = ) (./drivers.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [2] Overfull \hbox (19.63927pt too wide) in paragraph at lines 31--37 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 96--102 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 102--108 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 13532 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. ) (./dataStructure.tex) (./proto.tex [1] Overfull \hbox (3.55602pt too wide) in paragraph at lines 31--39 \OT1/cmr/m/it/10.95 Error check-ing: \OT1/cmr/m/n/10.95 If \OT1/cmtt/m/n/10.95 etree \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 graph \OT1/cmr/m/n/10.95 is \OT 1/cmtt/m/n/10.95 NULL\OT1/cmr/m/n/10.95 , or if $[] \OML/cmm/m/it/10.95 < \OT1/ cmr/m/n/10.95 1$, or if $[] \OML/cmm/m/it/10.95 < \OT1/cmr/m/n/10.95 1$, or if $[] \OMS/cmsy/m/n/10.95 6\OT1/cmr/m/n/10.95 = ) (./drivers.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [2] Overfull \hbox (19.63927pt too wide) in paragraph at lines 31--37 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 96--102 \OT1/cmtt/m/n/10.95 *.etreef \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.etreeb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 ETree \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 ETree[]readFromFile() Overfull \hbox (19.63927pt too wide) in paragraph at lines 102--108 \OT1/cmtt/m/n/10.95 *.graphf \OT1/cmr/m/n/10.95 or \OT1/cmtt/m/n/10.95 *.graphb \OT1/cmr/m/n/10.95 . The \OT1/cmtt/m/n/10.95 Graph \OT1/cmr/m/n/10.95 ob-ject i s read from the file via the \OT1/cmtt/m/n/10.95 Graph[]readFromFile() [3]) (./main.ind [4] [5]) (./main.aux) ) (see the transcript file for additional information) Output written on main.dvi (5 pages, 13532 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> SymbFac.ps . [1] [2] [3] [4] [5] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `liu90-etree' on page 1 undefined on input line 8. LaTeX Warning: Citation `duf83-multifrontal' on page 1 undefined on input line 9. LaTeX Warning: Citation `eis76-elementModel' on page 1 undefined on input line 10. LaTeX Warning: Reference `chapter:ETree' on page 1 undefined on input line 21. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] Overfull \hbox (16.3256pt too wide) in paragraph at lines 138--143 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Tree[]clearData()\OT1/cmr/m/n/ 10.95 . [3] [4] [5] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 420. LaTeX Warning: Citation `liu91-generalizedEnvelope' on page 6 undefined on inpu t line 472. [6] [7] [8] [9]) (./drivers.tex [10] psfig: searching ../../Tree/doc/R2D100HC.eps for bounding box psfig: including ../../Tree/doc/R2D100HC.eps psfig: searching ../../Tree/doc/R2D100DC.eps for bounding box psfig: including ../../Tree/doc/R2D100DC.eps psfig: searching ../../Tree/doc/R2D100HP.eps for bounding box psfig: including ../../Tree/doc/R2D100HP.eps psfig: searching ../../Tree/doc/R2D100DP.eps for bounding box psfig: including ../../Tree/doc/R2D100DP.eps ) (./main.ind [11] [12] [13]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 39088 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `liu90-etree' on page 1 undefined on input line 8. LaTeX Warning: Citation `duf83-multifrontal' on page 1 undefined on input line 9. LaTeX Warning: Citation `eis76-elementModel' on page 1 undefined on input line 10. LaTeX Warning: Reference `chapter:ETree' on page 1 undefined on input line 21. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] Overfull \hbox (16.3256pt too wide) in paragraph at lines 138--143 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Tree[]clearData()\OT1/cmr/m/n/ 10.95 . [3] [4] [5] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 420. LaTeX Warning: Citation `liu91-generalizedEnvelope' on page 6 undefined on inpu t line 472. [6] [7] [8] [9]) (./drivers.tex [10] psfig: searching ../../Tree/doc/R2D100HC.eps for bounding box psfig: including ../../Tree/doc/R2D100HC.eps psfig: searching ../../Tree/doc/R2D100DC.eps for bounding box psfig: including ../../Tree/doc/R2D100DC.eps psfig: searching ../../Tree/doc/R2D100HP.eps for bounding box psfig: including ../../Tree/doc/R2D100HP.eps psfig: searching ../../Tree/doc/R2D100DP.eps for bounding box psfig: including ../../Tree/doc/R2D100DP.eps ) (./main.ind [11] [12] [13]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 39088 bytes). Transcript written on main.log. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) (/usr/share/texmf-texlive/tex/generic/psfig/psfig.sty psfig/tex 1.10-dvips ) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `liu90-etree' on page 1 undefined on input line 8. LaTeX Warning: Citation `duf83-multifrontal' on page 1 undefined on input line 9. LaTeX Warning: Citation `eis76-elementModel' on page 1 undefined on input line 10. LaTeX Warning: Reference `chapter:ETree' on page 1 undefined on input line 21. ) (./dataStructure.tex (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd)) (./proto.tex [1] [2] Overfull \hbox (16.3256pt too wide) in paragraph at lines 138--143 []\OT1/cmr/m/n/10.95 This is the ba-sic ini-tial-izer method. Any pre-vi-ous da ta is cleared with a call to \OT1/cmtt/m/n/10.95 Tree[]clearData()\OT1/cmr/m/n/ 10.95 . [3] [4] [5] LaTeX Font Warning: Font shape `OMS/cmtt/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbraceleft' on input line 420. LaTeX Warning: Citation `liu91-generalizedEnvelope' on page 6 undefined on inpu t line 472. [6] [7] [8] [9]) (./drivers.tex [10] psfig: searching ../../Tree/doc/R2D100HC.eps for bounding box psfig: including ../../Tree/doc/R2D100HC.eps psfig: searching ../../Tree/doc/R2D100DC.eps for bounding box psfig: including ../../Tree/doc/R2D100DC.eps psfig: searching ../../Tree/doc/R2D100HP.eps for bounding box psfig: including ../../Tree/doc/R2D100HP.eps psfig: searching ../../Tree/doc/R2D100DP.eps for bounding box psfig: including ../../Tree/doc/R2D100DP.eps ) (./main.ind [11] [12] [13]) (./main.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. ) (see the transcript file for additional information) Output written on main.dvi (13 pages, 39088 bytes). Transcript written on main.log. This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2008.06.29:1241' -> Tree.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12<../../Tree/doc/R2D100HC.eps> <../../Tree/doc/R2D100DC.eps><../../Tree/doc/R2D100HP.eps> <../../Tree/doc/R2D100DP.eps>] [13] This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./main.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/leqno.clo) (/usr/share/texmf-texlive/tex/latex/base/size11.clo)) Writing index file main.idx (./main.aux) (./intro.tex Chapter 1. LaTeX Warning: Citation `bent93-sort' on page 1